RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 NACC2Q96BF6 587 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 BATF3Q9NR55 127 aa9.92□□□□□ -0.82
CTDSPL-201ENST00000273179 CFAP65Q6ZU64 1925 aaKnown RBP9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 POU5F1BQ06416 359 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 RABL6Q3YEC7 729 aaPredicted RBP9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 HABP4Q5JVS0 413 aaKnown RBP9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 PACS1Q6VY07 963 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 LRRC49Q8IUZ0 686 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 CKAP2LQ8IYA6 745 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 TEKT4Q8WW24 435 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 FAXDC2Q96IV6 333 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 TESK2Q96S53 571 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 FSD1Q9BTV5 496 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 EIF2AQ9BY44 585 aaKnown RBP9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 SENP2Q9HC62 589 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 DNAAF2Q9NVR5 837 aaKnown RBP9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 MIS18AQ9NYP9 233 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 KDM5DQ9BY66 1539 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 DUOX2Q9NRD8 1548 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 UHRF1BP1LA0JNW5 1464 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 ZSCAN12O43309 604 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 USO1O60763 962 aaKnown RBP9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 IL33O95760 270 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 LDHBP07195 334 aaKnown RBP9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 POTEIP0CG38 1075 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 C11orf74Q86VG3 221 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 LARGE2Q8N3Y3 721 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 TRIM63Q969Q1 353 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 PARD6BQ9BYG5 372 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 UBN1Q9NPG3 1134 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 UHRF1BP1Q6BDS2 1440 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 PAPOLAP51003 745 aaKnown RBP9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 RAB27AP51159 221 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 HSD17B7P56937 341 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 TAF12Q16514 161 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 CCDC122Q5T0U0 273 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 CROTQ9UKG9 612 aa9.91□□□□□ -0.82
CTDSPL-201ENST00000273179 RBM20Q5T481 1227 aaKnown RBP9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 FBXW10Q5XX13 1052 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 C16orf45Q96MC5 204 aaPredicted RBP9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 TTC1Q99614 292 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 HPS4Q9NQG7 708 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 SUPT3HO75486 399 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 TGFB3P10600 412 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 SCG2P13521 617 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 UBASH3AP57075 661 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 DAB2P98082 770 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 MYBPC3Q14896 1274 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 HSP90AA4PQ58FG1 418 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 BBOF1Q8ND07 529 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 SCG3Q8WXD2 468 aaKnown RBP9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 NLRP4Q96MN2 994 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 ALS2CR12Q96Q35 445 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 NACAP1Q9BZK3 213 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 CAPN10Q9HC96 672 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 ADGRF5Q8IZF2 1346 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 C2orf81A6NN90 581 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 ANKRD65E5RJM6 399 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 M0R2C6 588 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 MLH1P40692 756 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 ASIC2Q16515 512 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 TMEM132EQ6IEE7 984 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 RNF10Q8N5U6 811 aaKnown RBP9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 SPOCK2Q92563 424 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 LCMT1Q9UIC8 334 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 CAPN7Q9Y6W3 813 aa9.9□□□□□ -0.82
CTDSPL-201ENST00000273179 GOLGA8IPA6NC78 632 aa9.9□□□□□ -0.83
CTDSPL-201ENST00000273179 TIPRLO75663 272 aa9.9□□□□□ -0.83
CTDSPL-201ENST00000273179 GLMNQ92990 594 aa9.9□□□□□ -0.83
CTDSPL-201ENST00000273179 PARVBQ9HBI1 364 aa9.9□□□□□ -0.83
CTDSPL-201ENST00000273179 VTI1BQ9UEU0 232 aa9.9□□□□□ -0.83
CTDSPL-201ENST00000273179 EVC2Q86UK5 1308 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 INMTO95050 263 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 DDX5P17844 614 aaKnown RBP9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 ATF3P18847 181 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 RAPGEF1Q13905 1077 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 PLEKHG6Q3KR16 790 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 C14orf80Q86SX3 495 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 CCAR2Q8N163 923 aaKnown RBP9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 TSNARE1Q96NA8 513 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 PRKAG2Q9UGJ0 569 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 ERBINQ96RT1 1412 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 LRRD1A4D1F6 860 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 APOEP02649 317 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 CNGA1P29973 690 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 TNNI2P48788 182 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 MXI1P50539 228 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 RASSF7Q02833 373 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 SCRN1Q12765 414 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 KIF22Q14807 665 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 STK38Q15208 465 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 EHBP1Q8NDI1 1231 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 ACMSDQ8TDX5 336 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 UROC1Q96N76 676 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 SLC45A1Q9Y2W3 748 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 TMCC1O94876 653 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 ATP5DP30049 168 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 HNRNPH1P31943 449 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms