RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 NFAT5O94916 1531 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 ZNF34Q8IZ26 560 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 ZFP91Q96JP5 570 aaPredicted RBP14.22□□□□□ -0.13
UBXN4-201ENST00000272638 ZNF287Q9HBT7 754 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 GUCA1BQ9UMX6 200 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 CDHR2Q9BYE9 1310 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 CALM1P0DP23 149 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 CALM2P0DP24 149 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 CALM3P0DP25 149 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 ARID4AP29374 1257 aaPredicted RBP14.22□□□□□ -0.13
UBXN4-201ENST00000272638 LIFRP42702 1097 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 MATR3P43243 847 aaKnown RBP eCLIP14.22□□□□□ -0.13
UBXN4-201ENST00000272638 UBE4AQ14139 1066 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 ZNF569Q5MCW4 686 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 MFSD14BQ5SR56 506 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 HINFPQ9BQA5 517 aa14.22□□□□□ -0.13
UBXN4-201ENST00000272638 SYNRGQ9UMZ2 1314 aa14.21□□□□□ -0.13
UBXN4-201ENST00000272638 CCNT1O60563 726 aaKnown RBP14.21□□□□□ -0.13
UBXN4-201ENST00000272638 MAN1B1Q9UKM7 699 aa14.21□□□□□ -0.13
UBXN4-201ENST00000272638 RBM6P78332 1123 aaKnown RBP14.21□□□□□ -0.13
UBXN4-201ENST00000272638 MAPK8IP2Q13387 824 aaPredicted RBP14.21□□□□□ -0.13
UBXN4-201ENST00000272638 LRRC47Q8N1G4 583 aaKnown RBP14.21□□□□□ -0.13
UBXN4-201ENST00000272638 FAM84BQ96KN1 310 aaPredicted RBP14.21□□□□□ -0.13
UBXN4-201ENST00000272638 ZC3H12CQ9C0D7 883 aaKnown RBP14.21□□□□□ -0.13
UBXN4-201ENST00000272638 DOK7Q18PE1 504 aa14.21□□□□□ -0.14
UBXN4-201ENST00000272638 MSL1Q68DK7 614 aa14.21□□□□□ -0.14
UBXN4-201ENST00000272638 DYMQ7RTS9 669 aa14.21□□□□□ -0.14
UBXN4-201ENST00000272638 ADGRA1Q86SQ6 560 aa14.21□□□□□ -0.14
UBXN4-201ENST00000272638 CDCA7Q9BWT1 371 aaPredicted RBP14.21□□□□□ -0.14
UBXN4-201ENST00000272638 BIN2Q9UBW5 565 aaPredicted RBP14.21□□□□□ -0.14
UBXN4-201ENST00000272638 CAMTA2O94983 1202 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 ST5P78524 1137 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 ARID5AQ03989 594 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 PTF1AQ7RTS3 328 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 EVX2Q03828 476 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 ENGASEQ8NFI3 743 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 RBM28Q9NW13 759 aaKnown RBP14.2□□□□□ -0.14
UBXN4-201ENST00000272638 RHOXF2BP0C7M4 288 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 SCG2P13521 617 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 MCM6Q14566 821 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 GOLGA6L1Q8N7Z2 621 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 MLKLQ8NB16 471 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 CAPZA3Q96KX2 299 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 RHOXF2Q9BQY4 288 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 EXOC1Q9NV70 894 aa14.2□□□□□ -0.14
UBXN4-201ENST00000272638 ZNF76P36508 570 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 PLA2G12BQ9BX93 195 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 AKR1B15C9JRZ8 316 aaPredicted RBP14.19□□□□□ -0.14
UBXN4-201ENST00000272638 TERF1P54274 439 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 TDRD12Q587J7 1177 aaKnown RBP14.19□□□□□ -0.14
UBXN4-201ENST00000272638 FKBP15Q5T1M5 1219 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 USP17L2Q6R6M4 530 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 TBC1D7Q9P0N9 293 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 CALML3P27482 149 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 INTS5Q6P9B9 1019 aaKnown RBP14.19□□□□□ -0.14
UBXN4-201ENST00000272638 METTL16Q86W50 562 aaKnown RBP14.19□□□□□ -0.14
UBXN4-201ENST00000272638 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 PPP1R13BQ96KQ4 1090 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 PPP6R2O75170 966 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 PARP1P09874 1014 aaKnown RBP14.19□□□□□ -0.14
UBXN4-201ENST00000272638 EVCP57679 992 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 AXDND1Q5T1B0 1012 aaPredicted RBP14.19□□□□□ -0.14
UBXN4-201ENST00000272638 CALML4Q96GE6 196 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 EPC1Q9H2F5 836 aa14.19□□□□□ -0.14
UBXN4-201ENST00000272638 SETD1AO15047 1707 aaKnown RBP14.18□□□□□ -0.14
UBXN4-201ENST00000272638 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 PP2D1A8MPX8 630 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 CCDC175P0C221 793 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 SPECC1LQ69YQ0 1117 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 EYA3Q99504 573 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 SLF1Q9BQI6 1058 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 MMRN2Q9H8L6 949 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 RFX7Q2KHR2 1363 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.18□□□□□ -0.14
UBXN4-201ENST00000272638 KLRF2D3W0D1 207 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 GSTO1P78417 241 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 TXNRD3Q86VQ6 643 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 GGA1Q9UJY5 639 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 BTDP43251 543 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 HSP90B2PQ58FF3 399 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 CACNA2D4Q7Z3S7 1137 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 LINC00116Q8NCU8 138 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 STAG1Q8WVM7 1258 aa14.18□□□□□ -0.14
UBXN4-201ENST00000272638 PHACTR2O75167 634 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 KRT9P35527 623 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 TECP42680 631 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 CTR9Q6PD62 1173 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 BLIDQ8IZY5 108 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 CCDC148Q8NFR7 591 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 SH3RF3Q8TEJ3 882 aaPredicted RBP14.17□□□□□ -0.14
UBXN4-201ENST00000272638 NELFBQ8WX92 580 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 RRP36Q96EU6 259 aaKnown RBP14.17□□□□□ -0.14
UBXN4-201ENST00000272638 PSMB7Q99436 277 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 LTN1O94822 1766 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 PSMA7O14818 248 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 BMP15O95972 392 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 PDE4DQ08499 809 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 ARMCX5Q6P1M9 558 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 RNF26Q9BY78 433 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms