RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 GLIS2Q9BZE0 524 aaPredicted RBP10.09□□□□□ -0.79
TRIM43-201ENST00000272395 DNAJC25Q9H1X3 360 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 VEZTQ9HBM0 779 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 ZNF532Q9HCE3 1301 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 POLR3EQ9NVU0 708 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 FAM13BQ9NYF5 915 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 ZNF70Q9UC06 446 aaPredicted RBP10.09□□□□□ -0.79
TRIM43-201ENST00000272395 MYH13Q9UKX3 1938 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 SCN4AP35499 1836 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 TCRBV5S4A2TA0A5A2 114 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 TRAF5O00463 557 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 PRC1O43663 620 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 FGAP02671 866 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 PTGS1P23219 599 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 ME1P48163 572 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 MMP14P50281 582 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 DYNLL1P63167 89 aaKnown RBP10.09□□□□□ -0.79
TRIM43-201ENST00000272395 DHX8Q14562 1220 aaKnown RBP10.09□□□□□ -0.79
TRIM43-201ENST00000272395 PRAMEF18Q5VWM3 479 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 RALYLQ86SE5 291 aaKnown RBP10.09□□□□□ -0.79
TRIM43-201ENST00000272395 DRC7Q8IY82 874 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 CEP57L1Q8IYX8 460 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 MRPS27Q92552 414 aaKnown RBP10.09□□□□□ -0.79
TRIM43-201ENST00000272395 MRIQ9BWK5 157 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 NCOA5Q9HCD5 579 aaKnown RBP10.09□□□□□ -0.79
TRIM43-201ENST00000272395 USP40Q9NVE5 1235 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 AATFQ9NY61 560 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRIM43-201ENST00000272395 PYCARDQ9ULZ3 195 aa10.09□□□□□ -0.79
TRIM43-201ENST00000272395 TCP10L2B9ZVM9 353 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 ZNF213O14771 459 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 FOXP2O15409 715 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 MYO1BO43795 1136 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 TOMM70O94826 608 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 ATXN8OSP0DMR3 200 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 FDPSP14324 419 aaKnown RBP10.08□□□□□ -0.8
TRIM43-201ENST00000272395 ADD2P35612 726 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 SPDYE2Q495Y8 402 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 CCDC186Q7Z3E2 898 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 KRT26Q7Z3Y9 468 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 SLF2Q8IX21 1173 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 FSIP1Q8NA03 581 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 FBXO18Q8NFZ0 1043 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 SH3RF3Q8TEJ3 882 aaPredicted RBP10.08□□□□□ -0.8
TRIM43-201ENST00000272395 ZC3H15Q8WU90 426 aaKnown RBP10.08□□□□□ -0.8
TRIM43-201ENST00000272395 DCPSQ96C86 337 aaKnown RBP10.08□□□□□ -0.8
TRIM43-201ENST00000272395 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
TRIM43-201ENST00000272395 C8orf76Q96K31 380 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 PGAP2Q9UHJ9 254 aa10.08□□□□□ -0.8
TRIM43-201ENST00000272395 NAP1L2Q9ULW6 460 aaPredicted RBP10.08□□□□□ -0.8
TRIM43-201ENST00000272395 ZMYM6O95789 1325 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 GPR75-ASB3A0A0A6YYF3 556 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 KLF18A0A0U1RQI7 1052 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 GOLGA8BA8MQT2 603 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 CPLX1O14810 134 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 CDKL5O76039 1030 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 LDHCP07864 332 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 RHBDL3P58872 404 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 RBM10P98175 930 aaKnown RBP10.07□□□□□ -0.8
TRIM43-201ENST00000272395 NFIAQ12857 509 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 TRDNQ13061 729 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 UBE3CQ15386 1083 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 CDAN1Q8IWY9 1227 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 FMR1NBQ8N0W7 255 aaPredicted RBP10.07□□□□□ -0.8
TRIM43-201ENST00000272395 SMC1BQ8NDV3 1235 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
TRIM43-201ENST00000272395 BPIFA3Q9BQP9 254 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 GOLPH3LQ9H4A5 285 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 ORC3Q9UBD5 711 aaPredicted RBP10.07□□□□□ -0.8
TRIM43-201ENST00000272395 CLIP2Q9UDT6 1046 aa10.07□□□□□ -0.8
TRIM43-201ENST00000272395 BECN2A8MW95 431 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 GPAA1O43292 621 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 CEBPZQ03701 1054 aaKnown RBP10.06□□□□□ -0.8
TRIM43-201ENST00000272395 TCP10Q12799 353 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 MAPK8IP2Q13387 824 aaPredicted RBP10.06□□□□□ -0.8
TRIM43-201ENST00000272395 ALX1Q15699 326 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 SULF1Q8IWU6 871 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 C17orf53Q8N3J3 647 aaPredicted RBP10.06□□□□□ -0.8
TRIM43-201ENST00000272395 LINC00301Q8NCQ3 95 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 DDX4Q9NQI0 724 aaKnown RBP10.06□□□□□ -0.8
TRIM43-201ENST00000272395 PCDHA7Q9UN72 937 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 HPS5Q9UPZ3 1129 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 CNTNAP1P78357 1384 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 MAGEB6P1A0A0J9YX57 407 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 WDHD1O75717 1129 aaPredicted RBP10.06□□□□□ -0.8
TRIM43-201ENST00000272395 MBD4O95243 580 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 ITGBL1O95965 494 aaPredicted RBP10.06□□□□□ -0.8
TRIM43-201ENST00000272395 PICALMQ13492 652 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 RASA3Q14644 834 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 STK38Q15208 465 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 SYCP1Q15431 976 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 SF3A1Q15459 793 aaKnown RBP10.06□□□□□ -0.8
TRIM43-201ENST00000272395 ZRSR1Q15695 479 aaKnown RBP10.06□□□□□ -0.8
TRIM43-201ENST00000272395 CPLX2Q6PUV4 134 aaKnown RBP10.06□□□□□ -0.8
TRIM43-201ENST00000272395 SYNE3Q6ZMZ3 975 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 APOBEC3FQ8IUX4 373 aaKnown RBP10.06□□□□□ -0.8
TRIM43-201ENST00000272395 ZFPM1Q8IX07 1006 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 TEX11Q8IYF3 940 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 LCORLQ8N3X6 602 aa10.06□□□□□ -0.8
TRIM43-201ENST00000272395 RIOK1Q9BRS2 568 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms