RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 IPO8O15397 1037 aaKnown RBP11□□□□□ -0.65
TPM3-201ENST00000271850 FARP2O94887 1054 aaPredicted RBP11□□□□□ -0.65
TPM3-201ENST00000271850 GDF11O95390 407 aa11□□□□□ -0.65
TPM3-201ENST00000271850 LDHCP07864 332 aa11□□□□□ -0.65
TPM3-201ENST00000271850 UBXN2AP68543 259 aa11□□□□□ -0.65
TPM3-201ENST00000271850 MTMR2Q13614 643 aa11□□□□□ -0.65
TPM3-201ENST00000271850 GORABQ5T7V8 394 aa11□□□□□ -0.65
TPM3-201ENST00000271850 ZKSCAN2Q63HK3 967 aa11□□□□□ -0.65
TPM3-201ENST00000271850 NAA16Q6N069 864 aaPredicted RBP11□□□□□ -0.65
TPM3-201ENST00000271850 NKX2-3Q8TAU0 364 aa11□□□□□ -0.65
TPM3-201ENST00000271850 ZNF512BQ96KM6 892 aaPredicted RBP11□□□□□ -0.65
TPM3-201ENST00000271850 DEFB118Q96PH6 123 aa11□□□□□ -0.65
TPM3-201ENST00000271850 WDR18Q9BV38 432 aa11□□□□□ -0.65
TPM3-201ENST00000271850 CCDC8Q9H0W5 538 aaPredicted RBP11□□□□□ -0.65
TPM3-201ENST00000271850 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
TPM3-201ENST00000271850 BIN2Q9UBW5 565 aaPredicted RBP11□□□□□ -0.65
TPM3-201ENST00000271850 HERC5Q9UII4 1024 aaKnown RBP11□□□□□ -0.65
TPM3-201ENST00000271850 PALD1Q9ULE6 856 aa11□□□□□ -0.65
TPM3-201ENST00000271850 LHX6Q9UPM6 363 aa11□□□□□ -0.65
TPM3-201ENST00000271850 SURF6O75683 361 aaKnown RBP10.99□□□□□ -0.65
TPM3-201ENST00000271850 BACE1P56817 501 aa10.99□□□□□ -0.65
TPM3-201ENST00000271850 Q3C1V9 767 aa10.99□□□□□ -0.65
TPM3-201ENST00000271850 TTC39AQ5SRH9 613 aa10.99□□□□□ -0.65
TPM3-201ENST00000271850 CEP85Q6P2H3 762 aa10.99□□□□□ -0.65
TPM3-201ENST00000271850 TRIB2Q92519 343 aa10.99□□□□□ -0.65
TPM3-201ENST00000271850 DPF3Q92784 378 aa10.99□□□□□ -0.65
TPM3-201ENST00000271850 P2RX7Q99572 595 aaKnown RBP10.99□□□□□ -0.65
TPM3-201ENST00000271850 PI4KBQ9UBF8 816 aa10.99□□□□□ -0.65
TPM3-201ENST00000271850 MORF4L1Q9UBU8 362 aa10.99□□□□□ -0.65
TPM3-201ENST00000271850 SAP30BPQ9UHR5 308 aaKnown RBP10.99□□□□□ -0.65
TPM3-201ENST00000271850 SOX1O00570 391 aaPredicted RBP10.98□□□□□ -0.65
TPM3-201ENST00000271850 CNMDO75829 334 aa10.98□□□□□ -0.65
TPM3-201ENST00000271850 HOXA7P31268 230 aaPredicted RBP10.98□□□□□ -0.65
TPM3-201ENST00000271850 DHX36Q9H2U1 1008 aaKnown RBP10.98□□□□□ -0.65
TPM3-201ENST00000271850 EMILIN3Q9NT22 766 aa10.98□□□□□ -0.65
TPM3-201ENST00000271850 PNMA3Q9UL41 463 aa10.98□□□□□ -0.65
TPM3-201ENST00000271850 ZBTB21Q9ULJ3 1066 aa10.98□□□□□ -0.65
TPM3-201ENST00000271850 STK24Q9Y6E0 443 aa10.98□□□□□ -0.65
TPM3-201ENST00000271850 GCLCP48506 637 aaPredicted RBP10.97□□□□□ -0.65
TPM3-201ENST00000271850 MAP3K21Q5TCX8 1036 aa10.97□□□□□ -0.65
TPM3-201ENST00000271850 MIGA1Q8NAN2 632 aa10.97□□□□□ -0.65
TPM3-201ENST00000271850 USP6NLQ92738 828 aa10.97□□□□□ -0.65
TPM3-201ENST00000271850 COA7Q96BR5 231 aa10.97□□□□□ -0.65
TPM3-201ENST00000271850 PAWRQ96IZ0 340 aaKnown RBP10.97□□□□□ -0.65
TPM3-201ENST00000271850 TBC1D2Q9BYX2 928 aa10.97□□□□□ -0.65
TPM3-201ENST00000271850 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.97□□□□□ -0.65
TPM3-201ENST00000271850 PORCNQ9H237 461 aa10.97□□□□□ -0.65
TPM3-201ENST00000271850 RBPJLQ9UBG7 517 aa10.97□□□□□ -0.65
TPM3-201ENST00000271850 PCDHGA4Q9Y5G9 962 aa10.97□□□□□ -0.65
TPM3-201ENST00000271850 MYH1P12882 1939 aa10.97□□□□□ -0.65
TPM3-201ENST00000271850 BAG3O95817 575 aa10.96□□□□□ -0.65
TPM3-201ENST00000271850 HMGCRP04035 888 aa10.96□□□□□ -0.65
TPM3-201ENST00000271850 ASNSP08243 561 aa10.96□□□□□ -0.65
TPM3-201ENST00000271850 CYP7A1P22680 504 aa10.96□□□□□ -0.65
TPM3-201ENST00000271850 GUCY1A2P33402 732 aa10.96□□□□□ -0.65
TPM3-201ENST00000271850 HERVK_113P62684 666 aa10.96□□□□□ -0.65
TPM3-201ENST00000271850 CCDC158Q5M9N0 1113 aa10.96□□□□□ -0.65
TPM3-201ENST00000271850 TATDN1Q6P1N9 297 aa10.96□□□□□ -0.65
TPM3-201ENST00000271850 ITPRIPQ8IWB1 547 aa10.96□□□□□ -0.65
TPM3-201ENST00000271850 RIOK1Q9BRS2 568 aaKnown RBP10.96□□□□□ -0.65
TPM3-201ENST00000271850 EXOC6BQ9Y2D4 811 aa10.96□□□□□ -0.65
TPM3-201ENST00000271850 DNAH12Q6ZR08 3092 aa10.96□□□□□ -0.66
TPM3-201ENST00000271850 PFASO15067 1338 aa10.95□□□□□ -0.66
TPM3-201ENST00000271850 GH2P01242 217 aa10.95□□□□□ -0.66
TPM3-201ENST00000271850 TFRCP02786 760 aaKnown RBP10.95□□□□□ -0.66
TPM3-201ENST00000271850 CYP2B6P20813 491 aa10.95□□□□□ -0.66
TPM3-201ENST00000271850 OS9Q13438 667 aaPredicted RBP10.95□□□□□ -0.66
TPM3-201ENST00000271850 CCL14Q16627 93 aa10.95□□□□□ -0.66
TPM3-201ENST00000271850 FOXP4Q8IVH2 680 aaPredicted RBP10.95□□□□□ -0.66
TPM3-201ENST00000271850 MAGEB6Q8N7X4 407 aa10.95□□□□□ -0.66
TPM3-201ENST00000271850 TMC2Q8TDI7 906 aa10.95□□□□□ -0.66
TPM3-201ENST00000271850 ACER1Q8TDN7 264 aa10.95□□□□□ -0.66
TPM3-201ENST00000271850 PANK1Q8TE04 598 aa10.95□□□□□ -0.66
TPM3-201ENST00000271850 HTATIP2Q9BUP3 242 aa10.95□□□□□ -0.66
TPM3-201ENST00000271850 AS3MTQ9HBK9 375 aa10.95□□□□□ -0.66
TPM3-201ENST00000271850 LAMA2P24043 3122 aaKnown RBP10.94□□□□□ -0.66
TPM3-201ENST00000271850 RPTORQ8N122 1335 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 USP17L10C9JJH3 530 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 SMIM22K7EJ46 135 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 ARHGAP33O14559 1287 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 IDH1O75874 414 aaKnown RBP10.94□□□□□ -0.66
TPM3-201ENST00000271850 CHGBP05060 677 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 SHMT1P34896 483 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 PLCD1P51178 756 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 ERVK-9P63128 1117 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 ERVK-24P63145 666 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
TPM3-201ENST00000271850 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
TPM3-201ENST00000271850 GABPAQ06546 454 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 SLFNL1Q499Z3 407 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 MORN1Q5T089 497 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 ADGRD1Q6QNK2 874 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 SIRT2Q8IXJ6 389 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 C12orf42Q96LP6 360 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 MFRPQ9BY79 579 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 FLRT1Q9NZU1 646 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 STAP2Q9UGK3 403 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 OGDHLQ9ULD0 1010 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 RLFQ13129 1914 aa10.94□□□□□ -0.66
TPM3-201ENST00000271850 NAV1Q8NEY1 1877 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms