RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 KRT23Q9C075 422 aa16.12■□□□□ 0.17
TNFRSF11A-201ENST00000269485 FEZ2Q9UHY8 353 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF11A-201ENST00000269485 FGFR2P21802 821 aa16.12■□□□□ 0.17
TNFRSF11A-201ENST00000269485 DNA2P51530 1060 aa16.12■□□□□ 0.17
TNFRSF11A-201ENST00000269485 STAG2Q8N3U4 1231 aa16.12■□□□□ 0.17
TNFRSF11A-201ENST00000269485 RNF41Q9H4P4 317 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF11A-201ENST00000269485 SORBS3O60504 671 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 DPP8Q6V1X1 898 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 FAM200AQ8TCP9 573 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 CCDC34Q96HJ3 373 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 ZSCAN16Q9H4T2 348 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 PDE4DIPQ5VU43 2346 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 PFKFB1P16118 471 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 PLCD1P51178 756 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 GPSM2P81274 684 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 EPSTI1Q96J88 318 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 BRMS1Q9HCU9 246 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 ARID4AP29374 1257 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 USH1GQ495M9 461 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 LONRF3Q496Y0 759 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 BMP2KQ9NSY1 1161 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 TACC3Q9Y6A5 838 aa16.11■□□□□ 0.17
TNFRSF11A-201ENST00000269485 CCDC194A0A1B0GVG4 234 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 GDF11O95390 407 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 FBXO38Q6PIJ6 1188 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 CLEC4GQ6UXB4 293 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 SYT10Q6XYQ8 523 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 ANKRD7Q92527 254 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 ZBTB7AO95365 584 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 ATP1A3P13637 1013 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 TNNI2P48788 182 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 TBC1D10BQ4KMP7 808 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 FBXO3Q9UK99 471 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 SH2B2O14492 632 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 BAG3O95817 575 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 UBE4AQ14139 1066 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 CEP135Q66GS9 1140 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 ZNF804AQ7Z570 1209 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 DDX19AQ9NUU7 478 aaKnown RBP16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 HPS5Q9UPZ3 1129 aa16.1■□□□□ 0.17
TNFRSF11A-201ENST00000269485 BIN2Q9UBW5 565 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF11A-201ENST00000269485 C21orf2O43822 256 aa16.09■□□□□ 0.17
TNFRSF11A-201ENST00000269485 NAPAP54920 295 aa16.09■□□□□ 0.17
TNFRSF11A-201ENST00000269485 UBXN2AP68543 259 aa16.09■□□□□ 0.17
TNFRSF11A-201ENST00000269485 SERTAD1Q9UHV2 236 aa16.09■□□□□ 0.17
TNFRSF11A-201ENST00000269485 PARP3Q9Y6F1 533 aa16.09■□□□□ 0.17
TNFRSF11A-201ENST00000269485 WDHD1O75717 1129 aaPredicted RBP16.08■□□□□ 0.17
TNFRSF11A-201ENST00000269485 CCT6AP40227 531 aaKnown RBP16.08■□□□□ 0.17
TNFRSF11A-201ENST00000269485 TPM4P67936 248 aa16.08■□□□□ 0.17
TNFRSF11A-201ENST00000269485 SF3B2Q13435 895 aaKnown RBP16.08■□□□□ 0.17
TNFRSF11A-201ENST00000269485 KCTD1Q719H9 257 aa16.08■□□□□ 0.17
TNFRSF11A-201ENST00000269485 MIGA2Q7L4E1 593 aa16.08■□□□□ 0.17
TNFRSF11A-201ENST00000269485 CNPY4Q8N129 248 aa16.08■□□□□ 0.17
TNFRSF11A-201ENST00000269485 ENAHQ8N8S7 591 aaPredicted RBP16.08■□□□□ 0.17
TNFRSF11A-201ENST00000269485 DEF6Q9H4E7 631 aa16.08■□□□□ 0.17
TNFRSF11A-201ENST00000269485 PP2D1A8MPX8 630 aa16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 TCP10L2B9ZVM9 353 aa16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 INF2Q27J81 1249 aa16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ERCC6LQ2NKX8 1250 aa16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SOGA3Q5TF21 947 aa16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ZNF274Q96GC6 653 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ZSCAN10Q96SZ4 725 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 LY9Q9HBG7 655 aa16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 COA7Q96BR5 231 aa16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.16
TNFRSF11A-201ENST00000269485 TAF1P21675 1872 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 EPB41L2O43491 1005 aaKnown RBP16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 KIF23Q02241 960 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SRRTQ9BXP5 876 aaKnown RBP16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 DISP2A7MBM2 1401 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 TCRBV5S4A2TA0A5A2 114 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 GYS1P13807 737 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 LMAN1P49257 510 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SHROOM1Q2M3G4 852 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PNMA1Q8ND90 353 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 TBC1D7Q9P0N9 293 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 NBPF11Q86T75 865 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 FCHSD1Q86WN1 690 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 JMYQ8N9B5 988 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 USP40Q9NVE5 1235 aa16.07■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SP4Q02446 784 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CTR9Q6PD62 1173 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 SLC30A10Q6XR72 485 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 BANK1Q8NDB2 785 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 KCNB2Q92953 911 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 HINFPQ9BQA5 517 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 ANKRD2Q9GZV1 360 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 DCP1AQ9NPI6 582 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CWC15Q9P013 229 aaKnown RBP16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 KCNH3Q9ULD8 1083 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 FAM160A1Q05DH4 1040 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PRAMEF18Q5VWM3 479 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 LCMT1Q9UIC8 334 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 BCL9LQ86UU0 1499 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 CENPFP49454 3210 aa16.06■□□□□ 0.16
TNFRSF11A-201ENST00000269485 PTPN14Q15678 1187 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms