RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 SAR1BQ9Y6B6 198 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 INO80Q9ULG1 1556 aaPredicted RBP12.93□□□□□ -0.34
VPS33A-201ENST00000267199 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 ENC1O14682 589 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 PAK1Q13153 545 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 LETM2Q2VYF4 491 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 TPTE2Q6XPS3 522 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 CSGALNACT2Q8N6G5 542 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 LINC00301Q8NCQ3 95 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 SECISBP2LQ93073 1101 aaKnown RBP12.93□□□□□ -0.34
VPS33A-201ENST00000267199 TRIM31Q9BZY9 425 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 IL25Q9H293 177 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 KIAA1210Q9ULL0 1709 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 MROH5Q6ZUA9 1318 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 DDIT3P35638 169 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 TNNI2P48788 182 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 PNMA8AQ86V59 439 aaPredicted RBP12.93□□□□□ -0.34
VPS33A-201ENST00000267199 SLC35F6Q8N357 371 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 CABS1Q96KC9 395 aa12.93□□□□□ -0.34
VPS33A-201ENST00000267199 PICALMQ13492 652 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 CCDC25Q86WR0 208 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 PGBD1Q96JS3 809 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 TMOD2Q9NZR1 351 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 FAM170AA1A519 330 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 LDHBP07195 334 aaKnown RBP12.92□□□□□ -0.34
VPS33A-201ENST00000267199 CLNS1AP54105 237 aaKnown RBP12.92□□□□□ -0.34
VPS33A-201ENST00000267199 SLC39A14Q15043 492 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 APOA5Q6Q788 366 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 SRGAP1Q7Z6B7 1085 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 KLHL7Q8IXQ5 586 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 FBF1Q8TES7 1133 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 LRRC27Q9C0I9 530 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 AATFQ9NY61 560 aaKnown RBP eCLIP12.92□□□□□ -0.34
VPS33A-201ENST00000267199 NEXMIFQ5QGS0 1516 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 MYO3AQ8NEV4 1616 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 MYO1CO00159 1063 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 KIF4AO95239 1232 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 PPFIA1Q13136 1202 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 SDR42E1Q8WUS8 393 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 PPANQ9NQ55 473 aaKnown RBP12.92□□□□□ -0.34
VPS33A-201ENST00000267199 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
VPS33A-201ENST00000267199 CDC23Q9UJX2 597 aa12.92□□□□□ -0.34
VPS33A-201ENST00000267199 PDE8BO95263 885 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 IFI16Q16666 785 aaKnown RBP12.91□□□□□ -0.34
VPS33A-201ENST00000267199 KRT79Q5XKE5 535 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 BICDL2A1A5D9 508 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 STX10O60499 249 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 VIMP08670 466 aaKnown RBP12.91□□□□□ -0.34
VPS33A-201ENST00000267199 GNA11P29992 359 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 TNNC1P63316 161 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 ZNF710Q8N1W2 664 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 PUS7LQ9H0K6 701 aaKnown RBP12.91□□□□□ -0.34
VPS33A-201ENST00000267199 GJB4Q9NTQ9 266 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 ADGRB1O14514 1584 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 CIAO1O76071 339 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 GUCY2FP51841 1108 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 RAPGEF1Q13905 1077 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 CCDC6Q16204 474 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 RRP36Q96EU6 259 aaKnown RBP12.91□□□□□ -0.34
VPS33A-201ENST00000267199 AIFM3Q96NN9 605 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 TFCP2L1Q9NZI6 479 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 ASAP1Q9ULH1 1129 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 E7EVH7 732 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 HIBADHP31937 336 aaKnown RBP12.91□□□□□ -0.34
VPS33A-201ENST00000267199 MAGEA1P43355 309 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 BCAMP50895 628 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 PPARAQ07869 468 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 TMEM132AQ24JP5 1023 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 CCDC24Q8N4L8 307 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 CUL5Q93034 780 aa12.91□□□□□ -0.34
VPS33A-201ENST00000267199 A0A1B0GUA9 196 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 HLA-DOAP06340 250 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 KIF23Q02241 960 aaPredicted RBP12.9□□□□□ -0.34
VPS33A-201ENST00000267199 PDE4DQ08499 809 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 WHAMMP3Q1A5X7 153 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 KCTD16Q68DU8 428 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 NSRP1Q9H0G5 558 aaKnown RBP12.9□□□□□ -0.34
VPS33A-201ENST00000267199 NRXN1Q9ULB1 1477 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 CPS1P31327 1500 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 CASP14P31944 242 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 TRIM14Q14142 442 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 NELFBQ8WX92 580 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 FERMT2Q96AC1 680 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 RSRC1Q96IZ7 334 aaKnown RBP12.9□□□□□ -0.34
VPS33A-201ENST00000267199 ADAM21Q9UKJ8 722 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 A0A1W2PRG0 241 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 TMEM110-MUSTN1A8MSY1 372 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 USP17L12C9JPN9 530 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 USP17L21D6R901 530 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 RAD51AP2Q09MP3 1159 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 PPP2R5BQ15173 497 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 FAM71BQ8TC56 605 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 TNKSO95271 1327 aa12.9□□□□□ -0.34
VPS33A-201ENST00000267199 FAM47AQ5JRC9 791 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 GRAMD1CQ8IYS0 662 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms