RNA–Protein interactions for RNA: ENST00000266984.9

CCDC65-201, Transcript of coiled-coil domain containing 65, humanhuman

TSL 5 BASIC

Gene CCDC65, Length 2,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-201ENST00000266984 PRDM1O75626 825 aa11.11□□□□□ -0.63
CCDC65-201ENST00000266984 FGAP02671 866 aa11.11□□□□□ -0.63
CCDC65-201ENST00000266984 CYP2C8P10632 490 aa11.11□□□□□ -0.63
CCDC65-201ENST00000266984 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
CCDC65-201ENST00000266984 ALX1Q15699 326 aa11.11□□□□□ -0.63
CCDC65-201ENST00000266984 NOM1Q5C9Z4 860 aaKnown RBP11.11□□□□□ -0.63
CCDC65-201ENST00000266984 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
CCDC65-201ENST00000266984 ZNF444Q8N0Y2 327 aaPredicted RBP11.11□□□□□ -0.63
CCDC65-201ENST00000266984 CPA4Q9UI42 421 aa11.11□□□□□ -0.63
CCDC65-201ENST00000266984 TLR2O60603 784 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 SLC3A2P08195 630 aaKnown RBP11.1□□□□□ -0.63
CCDC65-201ENST00000266984 RASA1P20936 1047 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 CLEC10AQ8IUN9 316 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 INCENPQ9NQS7 918 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 PPP4R2Q9NY27 417 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 ROBO3Q96MS0 1386 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 A0A1W2PRG0 241 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 OSBPP22059 807 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 CHMLP26374 656 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 SP3Q02447 781 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 PDE4BQ07343 736 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 CD99L2Q8TCZ2 262 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 PARK7Q99497 189 aaKnown RBP11.1□□□□□ -0.63
CCDC65-201ENST00000266984 ZNF287Q9HBT7 754 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 SLC45A1Q9Y2W3 748 aa11.1□□□□□ -0.63
CCDC65-201ENST00000266984 ECM2O94769 699 aaPredicted RBP11.09□□□□□ -0.63
CCDC65-201ENST00000266984 ATP2B2Q01814 1243 aa11.09□□□□□ -0.63
CCDC65-201ENST00000266984 ICA1Q05084 483 aa11.09□□□□□ -0.63
CCDC65-201ENST00000266984 PABPC4Q13310 644 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC65-201ENST00000266984 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
CCDC65-201ENST00000266984 C17orf99Q6UX52 265 aa11.09□□□□□ -0.63
CCDC65-201ENST00000266984 SIAH1Q8IUQ4 282 aa11.09□□□□□ -0.63
CCDC65-201ENST00000266984 KIAA1683Q9H0B3 1180 aa11.09□□□□□ -0.63
CCDC65-201ENST00000266984 IL25Q9H293 177 aa11.09□□□□□ -0.63
CCDC65-201ENST00000266984 EEF2P13639 858 aaKnown RBP11.08□□□□□ -0.63
CCDC65-201ENST00000266984 USP14P54578 494 aa11.08□□□□□ -0.63
CCDC65-201ENST00000266984 HAND2P61296 217 aa11.08□□□□□ -0.63
CCDC65-201ENST00000266984 FAM47AQ5JRC9 791 aa11.08□□□□□ -0.63
CCDC65-201ENST00000266984 CTU1Q7Z7A3 348 aaKnown RBP11.08□□□□□ -0.63
CCDC65-201ENST00000266984 RUFY2Q8WXA3 655 aa11.08□□□□□ -0.63
CCDC65-201ENST00000266984 ERO1AQ96HE7 468 aa11.08□□□□□ -0.63
CCDC65-201ENST00000266984 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.08□□□□□ -0.63
CCDC65-201ENST00000266984 ARHGEF10LQ9HCE6 1279 aa11.08□□□□□ -0.63
CCDC65-201ENST00000266984 PNMA3Q9UL41 463 aa11.08□□□□□ -0.63
CCDC65-201ENST00000266984 TACC3Q9Y6A5 838 aa11.08□□□□□ -0.63
CCDC65-201ENST00000266984 LOC285556D6RIA3 1793 aa11.08□□□□□ -0.64
CCDC65-201ENST00000266984 TFAP4Q01664 338 aa11.08□□□□□ -0.64
CCDC65-201ENST00000266984 SMCR8Q8TEV9 937 aaPredicted RBP11.08□□□□□ -0.64
CCDC65-201ENST00000266984 ASCC2Q9H1I8 757 aaPredicted RBP11.08□□□□□ -0.64
CCDC65-201ENST00000266984 KANSL2Q9H9L4 492 aa11.08□□□□□ -0.64
CCDC65-201ENST00000266984 ANAPC4Q9UJX5 808 aa11.08□□□□□ -0.64
CCDC65-201ENST00000266984 ADGRA2Q96PE1 1338 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 TSPY3P0CV98 308 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 TSPY8P0CW00 308 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 IRX3P78415 501 aaPredicted RBP11.07□□□□□ -0.64
CCDC65-201ENST00000266984 C12orf42Q96LP6 360 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 P2RX7Q99572 595 aaKnown RBP11.07□□□□□ -0.64
CCDC65-201ENST00000266984 MCOLN1Q9GZU1 580 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 ZNF213O14771 459 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 RAD21O60216 631 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 HOXA7P31268 230 aaPredicted RBP11.07□□□□□ -0.64
CCDC65-201ENST00000266984 CAP1Q01518 475 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 KIF22Q14807 665 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 RRP12Q5JTH9 1297 aaKnown RBP11.07□□□□□ -0.64
CCDC65-201ENST00000266984 KIAA1755Q5JYT7 1200 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 DSCC1Q9BVC3 393 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 CLIP2Q9UDT6 1046 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCDC65-201ENST00000266984 TMX2Q9Y320 296 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 TRIM17Q9Y577 477 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 GTF3C3Q9Y5Q9 886 aa11.07□□□□□ -0.64
CCDC65-201ENST00000266984 USP17L15C9J2P7 530 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 USP17L13C9JLJ4 530 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 USP17L11C9JVI0 530 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 USP17L18D6R9N7 530 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 USP17L22D6RA61 530 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 USP17L17D6RBQ6 530 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 USP17L19D6RCP7 530 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 USP17L20D6RJB6 530 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 RANBP6O60518 1105 aaKnown RBP11.06□□□□□ -0.64
CCDC65-201ENST00000266984 BCRP11274 1271 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 VCAM1P19320 739 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 USP17L24Q0WX57 530 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 CATSPERGQ6ZRH7 1159 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 ANKRD13CQ8N6S4 541 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 NEDD1Q8NHV4 660 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 ARHGAP39Q9C0H5 1083 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 RPAP3Q9H6T3 665 aaPredicted RBP11.06□□□□□ -0.64
CCDC65-201ENST00000266984 SH2D4AQ9H788 454 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 EFCC1Q9HA90 598 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 ZMYM6O95789 1325 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 RAD50Q92878 1312 aa11.06□□□□□ -0.64
CCDC65-201ENST00000266984 TSPY2A6NKD2 308 aa11.05□□□□□ -0.64
CCDC65-201ENST00000266984 LACTBP83111 547 aaPredicted RBP11.05□□□□□ -0.64
CCDC65-201ENST00000266984 PTH1RQ03431 593 aa11.05□□□□□ -0.64
CCDC65-201ENST00000266984 BMP2KLQ5H9B9 411 aa11.05□□□□□ -0.64
CCDC65-201ENST00000266984 OTOP1Q7RTM1 612 aa11.05□□□□□ -0.64
CCDC65-201ENST00000266984 SPICE1Q8N0Z3 855 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms