RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SCG2P13521 617 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 SCNN1DP51172 638 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 PI16Q6UXB8 463 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 KIAA0825Q8IV33 1275 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 C17orf53Q8N3J3 647 aaPredicted RBP15.64■□□□□ 0.09
CDH3-201ENST00000264012 IKBKGQ9Y6K9 419 aa15.64■□□□□ 0.09
CDH3-201ENST00000264012 ECM2O94769 699 aaPredicted RBP15.63■□□□□ 0.09
CDH3-201ENST00000264012 CMA1P23946 247 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 RAD51AP2Q09MP3 1159 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 BIRC3Q13489 604 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 DOK7Q18PE1 504 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 DPH6Q7L8W6 267 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 SMAP1Q8IYB5 467 aaPredicted RBP15.63■□□□□ 0.09
CDH3-201ENST00000264012 DDX12PQ92771 950 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 FNBP1Q96RU3 617 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 ERVV-1B6SEH8 477 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 CALUO43852 315 aaPredicted RBP15.63■□□□□ 0.09
CDH3-201ENST00000264012 ATP8A2Q9NTI2 1148 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 PCDHA7Q9UN72 937 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 M0R2C6 588 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 DDX39AO00148 427 aaKnown RBP15.63■□□□□ 0.09
CDH3-201ENST00000264012 SEMA3EO15041 775 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 PCP11498 1178 aaKnown RBP15.63■□□□□ 0.09
CDH3-201ENST00000264012 BRINP3Q76B58 766 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 GPT2Q8TD30 523 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 VTI1AQ96AJ9 217 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 TBC1D7Q9P0N9 293 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 DDAH1O94760 285 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 HARSP12081 509 aaKnown RBP15.63■□□□□ 0.09
CDH3-201ENST00000264012 NLGN1Q8N2Q7 840 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 HOOK2Q96ED9 719 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 TIGD1Q96MW7 591 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 NUP58Q9BVL2 599 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 ATP6V0A2Q9Y487 856 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 CEP83Q9Y592 693 aa15.63■□□□□ 0.09
CDH3-201ENST00000264012 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.63■□□□□ 0.09
CDH3-201ENST00000264012 XDHP47989 1333 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 SPATA31A3Q5VYP0 1347 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 ZNF335Q9H4Z2 1342 aaPredicted RBP15.62■□□□□ 0.09
CDH3-201ENST00000264012 ARHGAP6O43182 974 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 PLCB3Q01970 1234 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 ZBED4O75132 1171 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 TUBBP07437 444 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 GOLGA8HP0CJ92 632 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 ADD2P35612 726 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 VAV2P52735 878 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 KCNQ4P56696 695 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 APOA5Q6Q788 366 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 FAM196AQ6ZSG2 479 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 XPO4Q9C0E2 1151 aaKnown RBP15.62■□□□□ 0.09
CDH3-201ENST00000264012 HOMER2Q9NSB8 354 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 INF2Q27J81 1249 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 TMTC1Q8IUR5 882 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 CCDC50Q8IVM0 306 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 OPA1O60313 960 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 ERCC3P19447 782 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 EVCP57679 992 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 ERFEQ4G0M1 354 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 C2CD5Q86YS7 1000 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 LRRC47Q8N1G4 583 aaKnown RBP15.62■□□□□ 0.09
CDH3-201ENST00000264012 TRPC5Q9UL62 973 aaPredicted RBP15.62■□□□□ 0.09
CDH3-201ENST00000264012 LEMD3Q9Y2U8 911 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 GLI2P10070 1586 aa15.62■□□□□ 0.09
CDH3-201ENST00000264012 TNNC1P63316 161 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 MAEAQ7L5Y9 396 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 NELFCDQ8IXH7 590 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 GPKOWQ92917 476 aaPredicted RBP eCLIP15.61■□□□□ 0.09
CDH3-201ENST00000264012 OSBP2Q969R2 916 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 DKC1O60832 514 aaKnown RBP eCLIP15.61■□□□□ 0.09
CDH3-201ENST00000264012 MTX1Q13505 466 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 CUL4AQ13619 759 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 TMEM87AQ8NBN3 555 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 PI4K2BQ8TCG2 481 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 IFT74Q96LB3 600 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 NAPGQ99747 312 aaPredicted RBP15.61■□□□□ 0.09
CDH3-201ENST00000264012 AXIN2Q9Y2T1 843 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 FRMPD2Q68DX3 1309 aaPredicted RBP15.61■□□□□ 0.09
CDH3-201ENST00000264012 GSTA5Q7RTV2 222 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 CHURC1Q8WUH1 139 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 ERO1AQ96HE7 468 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 NT5C3AQ9H0P0 336 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.61■□□□□ 0.09
CDH3-201ENST00000264012 BCORL1Q5H9F3 1711 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 ALKQ9UM73 1620 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 BAG6P46379 1132 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 WDR44Q5JSH3 913 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 FAM182BQ5T319 152 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 IFT81Q8WYA0 676 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 KIFC2Q96AC6 838 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 CCDC77Q9BR77 488 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 ATP10DQ9P241 1426 aa15.61■□□□□ 0.09
CDH3-201ENST00000264012 H7C1W4 665 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 PPP2R3AQ06190 1150 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 MYCT1Q8N699 235 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 NSUN7Q8NE18 718 aaKnown RBP15.6■□□□□ 0.09
CDH3-201ENST00000264012 TNFAIP3P21580 790 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 PRKG1Q13976 671 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 GRIPAP1Q4V328 841 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 SPECC1LQ69YQ0 1117 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 MSANTD4Q8NCY6 345 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms