RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CACTINQ8WUQ7 758 aaKnown RBP18.51■□□□□ 0.55
CTCF-201ENST00000264010 PLCD4Q9BRC7 762 aa18.51■□□□□ 0.55
CTCF-201ENST00000264010 COL14A1Q05707 1796 aaKnown RBP18.51■□□□□ 0.55
CTCF-201ENST00000264010 RESP18Q5W5W9 173 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 ILDR1Q86SU0 546 aaPredicted RBP18.5■□□□□ 0.55
CTCF-201ENST00000264010 PRPF3O43395 683 aaKnown RBP18.5■□□□□ 0.55
CTCF-201ENST00000264010 MYO1BO43795 1136 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 ATRNO75882 1429 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 CALRP27797 417 aaKnown RBP18.5■□□□□ 0.55
CTCF-201ENST00000264010 VWA3AA6NCI4 1184 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 RDXP35241 583 aaKnown RBP18.5■□□□□ 0.55
CTCF-201ENST00000264010 HSP90AA4PQ58FG1 418 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 FAM196AQ6ZSG2 479 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 HEATR3Q7Z4Q2 680 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 TEX11Q8IYF3 940 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 IQUBQ8NA54 791 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 CENPHQ9H3R5 247 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 PCDHA5Q9Y5H7 936 aa18.5■□□□□ 0.55
CTCF-201ENST00000264010 IKBKBO14920 756 aa18.49■□□□□ 0.55
CTCF-201ENST00000264010 WDHD1O75717 1129 aaPredicted RBP18.49■□□□□ 0.55
CTCF-201ENST00000264010 ENAHQ8N8S7 591 aaPredicted RBP18.49■□□□□ 0.55
CTCF-201ENST00000264010 NBPF3Q9H094 633 aa18.49■□□□□ 0.55
CTCF-201ENST00000264010 MCM7P33993 719 aa18.49■□□□□ 0.55
CTCF-201ENST00000264010 ATP2B2Q01814 1243 aa18.49■□□□□ 0.55
CTCF-201ENST00000264010 PIK3AP1Q6ZUJ8 805 aa18.49■□□□□ 0.55
CTCF-201ENST00000264010 SMIM5Q71RC9 77 aa18.49■□□□□ 0.55
CTCF-201ENST00000264010 SPTLC3Q9NUV7 552 aa18.49■□□□□ 0.55
CTCF-201ENST00000264010 UBA7P41226 1012 aa18.49■□□□□ 0.55
CTCF-201ENST00000264010 XDHP47989 1333 aa18.49■□□□□ 0.55
CTCF-201ENST00000264010 AP5Z1O43299 807 aa18.48■□□□□ 0.55
CTCF-201ENST00000264010 LMAN1P49257 510 aa18.48■□□□□ 0.55
CTCF-201ENST00000264010 SLC10A5Q5PT55 438 aa18.48■□□□□ 0.55
CTCF-201ENST00000264010 ARHGEF1Q92888 912 aaKnown RBP18.48■□□□□ 0.55
CTCF-201ENST00000264010 TSPYL1Q9H0U9 437 aa18.48■□□□□ 0.55
CTCF-201ENST00000264010 MAGEC2Q9UBF1 373 aaPredicted RBP18.48■□□□□ 0.55
CTCF-201ENST00000264010 SAP30BPQ9UHR5 308 aaKnown RBP18.48■□□□□ 0.55
CTCF-201ENST00000264010 FBXO33Q7Z6M2 555 aa18.48■□□□□ 0.55
CTCF-201ENST00000264010 BPIFA3Q9BQP9 254 aa18.48■□□□□ 0.55
CTCF-201ENST00000264010 SCG2P13521 617 aa18.48■□□□□ 0.55
CTCF-201ENST00000264010 PRDX5P30044 214 aa18.48■□□□□ 0.55
CTCF-201ENST00000264010 AXDND1Q5T1B0 1012 aaPredicted RBP18.48■□□□□ 0.55
CTCF-201ENST00000264010 CTR9Q6PD62 1173 aa18.48■□□□□ 0.55
CTCF-201ENST00000264010 TGFBRAP1Q8WUH2 860 aa18.48■□□□□ 0.55
CTCF-201ENST00000264010 GUCY1A2P33402 732 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 GRAPQ13588 217 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 LONRF3Q496Y0 759 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 DHX40Q8IX18 779 aaKnown RBP18.47■□□□□ 0.55
CTCF-201ENST00000264010 GRAPLQ8TC17 118 aaPredicted RBP18.47■□□□□ 0.55
CTCF-201ENST00000264010 CDK5RAP3Q96JB5 506 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.47■□□□□ 0.55
CTCF-201ENST00000264010 ANAPC4Q9UJX5 808 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 PTPREP23469 700 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 SHC4Q6S5L8 630 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 NSUN4Q96CB9 384 aaKnown RBP18.47■□□□□ 0.55
CTCF-201ENST00000264010 RMND1Q9NWS8 449 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 PCDHB6Q9Y5E3 794 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 RIOK3O14730 519 aaKnown RBP18.47■□□□□ 0.55
CTCF-201ENST00000264010 ATP2B4P23634 1241 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 PCMTD1Q96MG8 357 aaPredicted RBP18.47■□□□□ 0.55
CTCF-201ENST00000264010 VAT1LQ9HCJ6 419 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 DCP1AQ9NPI6 582 aaPredicted RBP18.47■□□□□ 0.55
CTCF-201ENST00000264010 RSPH14Q9UHP6 348 aa18.47■□□□□ 0.55
CTCF-201ENST00000264010 SRPRBQ9Y5M8 271 aaKnown RBP18.47■□□□□ 0.55
CTCF-201ENST00000264010 NTRK3Q16288 839 aa18.46■□□□□ 0.55
CTCF-201ENST00000264010 MAPKAPK5Q8IW41 473 aa18.46■□□□□ 0.55
CTCF-201ENST00000264010 KCNF1Q9H3M0 494 aa18.46■□□□□ 0.55
CTCF-201ENST00000264010 TRIML1Q8N9V2 468 aa18.46■□□□□ 0.55
CTCF-201ENST00000264010 PNMA1Q8ND90 353 aa18.46■□□□□ 0.55
CTCF-201ENST00000264010 TCP11L1Q9NUJ3 509 aa18.46■□□□□ 0.55
CTCF-201ENST00000264010 BCL2L12Q9HB09 334 aa18.46■□□□□ 0.55
CTCF-201ENST00000264010 NFE2L3Q9Y4A8 694 aa18.46■□□□□ 0.55
CTCF-201ENST00000264010 UBXN4Q92575 508 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 DRC1Q96MC2 740 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 CSRNP2Q9H175 543 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 RGL2O15211 777 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 PLEKHA8P1O95397 391 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 STAT6P42226 847 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 RRAGBQ5VZM2 374 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 TMTC3Q6ZXV5 915 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 TUBB4AP04350 444 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 NT5C2P49902 561 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 NAPAP54920 295 aa18.45■□□□□ 0.54
CTCF-201ENST00000264010 C3orf67Q6ZVT6 689 aa18.44■□□□□ 0.54
CTCF-201ENST00000264010 CTAGE1Q96RT6 745 aa18.44■□□□□ 0.54
CTCF-201ENST00000264010 ORC4O43929 436 aa18.44■□□□□ 0.54
CTCF-201ENST00000264010 MNAT1P51948 309 aa18.44■□□□□ 0.54
CTCF-201ENST00000264010 TMCO3Q6UWJ1 677 aa18.44■□□□□ 0.54
CTCF-201ENST00000264010 DTHD1Q6ZMT9 781 aa18.44■□□□□ 0.54
CTCF-201ENST00000264010 ZNF579Q8NAF0 562 aaKnown RBP18.44■□□□□ 0.54
CTCF-201ENST00000264010 TBC1D22AQ8WUA7 517 aa18.44■□□□□ 0.54
CTCF-201ENST00000264010 LZTS2Q9BRK4 669 aa18.44■□□□□ 0.54
CTCF-201ENST00000264010 USP17L8P0C7I0 530 aa18.44■□□□□ 0.54
CTCF-201ENST00000264010 RIOK1Q9BRS2 568 aaKnown RBP18.44■□□□□ 0.54
CTCF-201ENST00000264010 ZC3H12CQ9C0D7 883 aaKnown RBP18.44■□□□□ 0.54
CTCF-201ENST00000264010 C6orf50Q9HD87 102 aa18.44■□□□□ 0.54
CTCF-201ENST00000264010 IPO7O95373 1038 aaKnown RBP18.43■□□□□ 0.54
CTCF-201ENST00000264010 STX17P56962 302 aa18.43■□□□□ 0.54
CTCF-201ENST00000264010 FANCLQ9NW38 375 aa18.43■□□□□ 0.54
CTCF-201ENST00000264010 CYP2D6P10635 497 aa18.43■□□□□ 0.54
CTCF-201ENST00000264010 CCDC144BQ3MJ40 725 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms