RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ZNF594Q96JF6 807 aaPredicted RBP13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 PYM1Q9BRP8 204 aaKnown RBP13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 TAOK2Q9UL54 1235 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 NID2Q14112 1375 aa13.99□□□□□ -0.17
CHMP2B-201ENST00000263780 B4E1Z4 1266 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 DEXIO95424 95 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 UBE3CQ15386 1083 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 ALX1Q15699 326 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 CCDC91Q7Z6B0 441 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 SH3RF1Q7Z6J0 888 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 CEP89Q96ST8 783 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 NBPF3Q9H094 633 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 CSRNP2Q9H175 543 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 STRN4Q9NRL3 753 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 SAR1BQ9Y6B6 198 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 A0A0U1RQJ8 604 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 EBAG9O00559 213 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 IFIT3O14879 490 aaKnown RBP13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 STX17P56962 302 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 ERVK-24P63145 666 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 SART3Q15020 963 aaKnown RBP13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 MCTP2Q6DN12 878 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 ATRIPQ8WXE1 791 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 RUBCNQ92622 972 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 PAGE5Q96GU1 130 aa13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 EPN1Q9Y6I3 576 aaPredicted RBP13.98□□□□□ -0.17
CHMP2B-201ENST00000263780 CDHR2Q9BYE9 1310 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 TRIM75PA6NK02 468 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 XBP1P17861 261 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 KRT83P78385 493 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 GRIN1Q05586 938 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 ZNF662Q6ZS27 426 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 CERS3Q8IU89 383 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 TMTC2Q8N394 836 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 FERMT2Q96AC1 680 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 PUS3Q9BZE2 481 aaKnown RBP13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 KRT23Q9C075 422 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 ATRNO75882 1429 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 PPP1R3GB7ZBB8 358 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 ADORA1P30542 326 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 KRT9P35527 623 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 RCAN1P53805 252 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 RTN1Q16799 776 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 PAPD7Q5XG87 772 aaKnown RBP13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 NCAPH2Q6IBW4 605 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 POTEDQ86YR6 584 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 MICALL1Q8N3F8 863 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 ZNF512BQ96KM6 892 aaPredicted RBP13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 SLF1Q9BQI6 1058 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 MTA3Q9BTC8 594 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 PCDHB6Q9Y5E3 794 aa13.97□□□□□ -0.17
CHMP2B-201ENST00000263780 SCN11AQ9UI33 1791 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 ERLIN2O94905 339 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 NDUFA10O95299 355 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 DPYDQ12882 1025 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 PPFIA1Q13136 1202 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 KRT31Q15323 416 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 DRC1Q96MC2 740 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 RWDD2AQ9UIY3 292 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 GUCA1BQ9UMX6 200 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 MST1RQ04912 1400 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 SHTN1A0MZ66 631 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 GOLGA6CA6NDK9 693 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 GOLGA6DP0CG33 693 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 AFMP43652 599 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 COPB1P53618 953 aaKnown RBP13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 CABP4P57796 275 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 OR8K1Q8NGG5 319 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 GOLGA6AQ9NYA3 693 aa13.96□□□□□ -0.17
CHMP2B-201ENST00000263780 HSP90AB3PQ58FF7 597 aa13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 KCNJ14Q9UNX9 436 aa13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 AXIN2Q9Y2T1 843 aa13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 ERICH2A1L162 156 aa13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 GOLGA8KD6RF30 607 aa13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 KRT86O43790 486 aa13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 CEBPAP49715 358 aaPredicted RBP13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 SCARF1Q14162 830 aa13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 PPP2R5BQ15173 497 aa13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 CCNI2Q6ZMN8 369 aaPredicted RBP13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 ANKLE2Q86XL3 938 aa13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
CHMP2B-201ENST00000263780 GOLGA6BA6NDN3 693 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 OPA1O60313 960 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 CCT6AP40227 531 aaKnown RBP13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 AMOTL1Q8IY63 956 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 CRACR2BQ8N4Y2 399 aaPredicted RBP13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 SENP2Q9HC62 589 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 CABP5Q9NP86 173 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 SEC31BQ9NQW1 1179 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 NLRP2Q9NX02 1062 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 CTNND2Q9UQB3 1225 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 ANO9A1A5B4 782 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 IPO7O95373 1038 aaKnown RBP13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 GGCXP38435 758 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 IRAK1P51617 712 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 TCP11X2Q5H9J9 407 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 SPATS2Q86XZ4 545 aaKnown RBP13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 CAGE1Q8TC20 777 aa13.94□□□□□ -0.18
CHMP2B-201ENST00000263780 MYL10Q9BUA6 226 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms