RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 RGS22Q8NE09 1264 aa27.8■■■□□ 2.04
EPCAM-201ENST00000263735 CCDC17Q96LX7 622 aa27.8■■■□□ 2.04
EPCAM-201ENST00000263735 MAP3K14Q99558 947 aa27.8■■■□□ 2.04
EPCAM-201ENST00000263735 TRIM34Q9BYJ4 488 aa27.8■■■□□ 2.04
EPCAM-201ENST00000263735 DNAJC18Q9H819 358 aa27.8■■■□□ 2.04
EPCAM-201ENST00000263735 ATAD5Q96QE3 1844 aa27.8■■■□□ 2.04
EPCAM-201ENST00000263735 CNTNAP1P78357 1384 aa27.79■■■□□ 2.04
EPCAM-201ENST00000263735 GOLGA6L22H0YM25 854 aa27.79■■■□□ 2.04
EPCAM-201ENST00000263735 H3BQV1 296 aa27.79■■■□□ 2.04
EPCAM-201ENST00000263735 NOVP48745 357 aa27.79■■■□□ 2.04
EPCAM-201ENST00000263735 IFFO2Q5TF58 517 aa27.79■■■□□ 2.04
EPCAM-201ENST00000263735 MICALL2Q8IY33 904 aa27.79■■■□□ 2.04
EPCAM-201ENST00000263735 PNMA1Q8ND90 353 aa27.79■■■□□ 2.04
EPCAM-201ENST00000263735 STX8Q9UNK0 236 aa27.79■■■□□ 2.04
EPCAM-201ENST00000263735 SHTN1A0MZ66 631 aa27.78■■■□□ 2.04
EPCAM-201ENST00000263735 CNOT7Q9UIV1 285 aaKnown RBP27.78■■■□□ 2.04
EPCAM-201ENST00000263735 FMNL1O95466 1100 aaPredicted RBP27.78■■■□□ 2.04
EPCAM-201ENST00000263735 AKR1B1P15121 316 aa27.78■■■□□ 2.04
EPCAM-201ENST00000263735 YBX3P16989 372 aaKnown RBP eCLIP27.78■■■□□ 2.042e-6■■□□□ 11.4
EPCAM-201ENST00000263735 NBPF9Q3BBW0 867 aa27.78■■■□□ 2.04
EPCAM-201ENST00000263735 GPC2Q8N158 579 aa27.78■■■□□ 2.04
EPCAM-201ENST00000263735 CTCFLQ8NI51 663 aaPredicted RBP27.78■■■□□ 2.04
EPCAM-201ENST00000263735 CEP95Q96GE4 821 aa27.78■■■□□ 2.04
EPCAM-201ENST00000263735 CSRNP1Q96S65 589 aa27.78■■■□□ 2.04
EPCAM-201ENST00000263735 VEZTQ9HBM0 779 aa27.78■■■□□ 2.04
EPCAM-201ENST00000263735 PTMSP20962 102 aa27.77■■■□□ 2.04
EPCAM-201ENST00000263735 SSRP1Q08945 709 aaKnown RBP27.77■■■□□ 2.04
EPCAM-201ENST00000263735 ANP32EQ9BTT0 268 aa27.77■■■□□ 2.04
EPCAM-201ENST00000263735 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.77■■■□□ 2.04
EPCAM-201ENST00000263735 HERC5Q9UII4 1024 aaKnown RBP27.77■■■□□ 2.04
EPCAM-201ENST00000263735 IGKV6D-41A0A0C4DH26 115 aa27.76■■■□□ 2.03
EPCAM-201ENST00000263735 PPFIA3O75145 1194 aa27.76■■■□□ 2.03
EPCAM-201ENST00000263735 TATDN1Q6P1N9 297 aa27.76■■■□□ 2.03
EPCAM-201ENST00000263735 TRIM22Q8IYM9 498 aa27.76■■■□□ 2.03
EPCAM-201ENST00000263735 PHKBQ93100 1093 aa27.76■■■□□ 2.03
EPCAM-201ENST00000263735 TMEM47Q9BQJ4 181 aa27.76■■■□□ 2.03
EPCAM-201ENST00000263735 BAZ2BQ9UIF8 2168 aaKnown RBP27.76■■■□□ 2.03
EPCAM-201ENST00000263735 PPP4R3BQ5MIZ7 849 aa27.75■■■□□ 2.03
EPCAM-201ENST00000263735 KIF5BP33176 963 aa27.75■■■□□ 2.03
EPCAM-201ENST00000263735 TNNI2P48788 182 aa27.75■■■□□ 2.03
EPCAM-201ENST00000263735 NBPF11Q86T75 865 aa27.75■■■□□ 2.03
EPCAM-201ENST00000263735 WASF1Q92558 559 aa27.75■■■□□ 2.03
EPCAM-201ENST00000263735 C8orf76Q96K31 380 aa27.75■■■□□ 2.03
EPCAM-201ENST00000263735 SLC26A6Q9BXS9 759 aa27.75■■■□□ 2.03
EPCAM-201ENST00000263735 MTMR4Q9NYA4 1195 aa27.75■■■□□ 2.03
EPCAM-201ENST00000263735 TOP1P11387 765 aaKnown RBP27.74■■■□□ 2.03
EPCAM-201ENST00000263735 TNFAIP1Q13829 316 aa27.74■■■□□ 2.03
EPCAM-201ENST00000263735 RNF26Q9BY78 433 aaPredicted RBP27.74■■■□□ 2.03
EPCAM-201ENST00000263735 POLR2AP24928 1970 aaKnown RBP27.74■■■□□ 2.03
EPCAM-201ENST00000263735 CERKLQ49MI3 558 aaPredicted RBP27.73■■■□□ 2.03
EPCAM-201ENST00000263735 MCTP1Q6DN14 999 aa27.73■■■□□ 2.03
EPCAM-201ENST00000263735 TMTC3Q6ZXV5 915 aa27.73■■■□□ 2.03
EPCAM-201ENST00000263735 FAM196BA6NMK8 535 aa27.72■■■□□ 2.03
EPCAM-201ENST00000263735 H7C1D1 291 aa27.72■■■□□ 2.03
EPCAM-201ENST00000263735 DEXIO95424 95 aa27.72■■■□□ 2.03
EPCAM-201ENST00000263735 KIF4BQ2VIQ3 1234 aa27.72■■■□□ 2.03
EPCAM-201ENST00000263735 ALG1Q9BT22 464 aa27.72■■■□□ 2.03
EPCAM-201ENST00000263735 ZSCAN16Q9H4T2 348 aaPredicted RBP27.72■■■□□ 2.03
EPCAM-201ENST00000263735 EGFRP00533 1210 aa27.72■■■□□ 2.03
EPCAM-201ENST00000263735 GRM4Q14833 912 aa27.72■■■□□ 2.03
EPCAM-201ENST00000263735 SAMD7Q7Z3H4 446 aa27.72■■■□□ 2.03
EPCAM-201ENST00000263735 FBXO18Q8NFZ0 1043 aa27.72■■■□□ 2.03
EPCAM-201ENST00000263735 RNF181Q9P0P0 153 aa27.72■■■□□ 2.03
EPCAM-201ENST00000263735 TTLL1O95922 423 aa27.71■■■□□ 2.03
EPCAM-201ENST00000263735 FUT2Q10981 343 aa27.71■■■□□ 2.03
EPCAM-201ENST00000263735 RBM26Q5T8P6 1007 aaKnown RBP27.71■■■□□ 2.03
EPCAM-201ENST00000263735 FERMT3Q86UX7 667 aa27.71■■■□□ 2.03
EPCAM-201ENST00000263735 GPRC5DQ9NZD1 345 aa27.71■■■□□ 2.03
EPCAM-201ENST00000263735 MPHOSPH10O00566 681 aaKnown RBP27.7■■■□□ 2.03
EPCAM-201ENST00000263735 PLEKHA8P1O95397 391 aa27.7■■■□□ 2.03
EPCAM-201ENST00000263735 SLURP2P0DP57 97 aa27.7■■■□□ 2.03
EPCAM-201ENST00000263735 FOSBP53539 338 aa27.7■■■□□ 2.03
EPCAM-201ENST00000263735 TBC1D10BQ4KMP7 808 aaPredicted RBP27.7■■■□□ 2.03
EPCAM-201ENST00000263735 CNTNAP5Q8WYK1 1306 aa27.7■■■□□ 2.02
EPCAM-201ENST00000263735 GNAQP50148 359 aa27.7■■■□□ 2.02
EPCAM-201ENST00000263735 RESTQ13127 1097 aa27.7■■■□□ 2.02
EPCAM-201ENST00000263735 CMTR1Q8N1G2 835 aaKnown RBP27.7■■■□□ 2.02
EPCAM-201ENST00000263735 TMEM39BQ9GZU3 492 aa27.7■■■□□ 2.02
EPCAM-201ENST00000263735 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.7■■■□□ 2.02
EPCAM-201ENST00000263735 TBC1D12O60347 775 aa27.69■■■□□ 2.02
EPCAM-201ENST00000263735 AKAP17AQ02040 695 aaKnown RBP27.69■■■□□ 2.02
EPCAM-201ENST00000263735 TMEM179Q6ZVK1 233 aa27.69■■■□□ 2.02
EPCAM-201ENST00000263735 CCDC82Q8N4S0 544 aa27.69■■■□□ 2.02
EPCAM-201ENST00000263735 PRPF3O43395 683 aaKnown RBP27.68■■■□□ 2.02
EPCAM-201ENST00000263735 PGAP2Q9UHJ9 254 aa27.68■■■□□ 2.02
EPCAM-201ENST00000263735 MAD2L2Q9UI95 211 aa27.68■■■□□ 2.02
EPCAM-201ENST00000263735 FOXD4L6Q3SYB3 417 aaPredicted RBP27.67■■■□□ 2.02
EPCAM-201ENST00000263735 FOXD4L3Q6VB84 417 aaPredicted RBP27.67■■■□□ 2.02
EPCAM-201ENST00000263735 CHAMP1Q96JM3 812 aa27.67■■■□□ 2.02
EPCAM-201ENST00000263735 AIFM3Q96NN9 605 aa27.67■■■□□ 2.02
EPCAM-201ENST00000263735 GUCY1B3Q02153 619 aa27.67■■■□□ 2.02
EPCAM-201ENST00000263735 TRIM29Q14134 588 aa27.67■■■□□ 2.02
EPCAM-201ENST00000263735 ABCB5Q2M3G0 1257 aa27.67■■■□□ 2.02
EPCAM-201ENST00000263735 SRBD1Q8N5C6 995 aaKnown RBP27.67■■■□□ 2.02
EPCAM-201ENST00000263735 KANSL2Q9H9L4 492 aa27.67■■■□□ 2.02
EPCAM-201ENST00000263735 RBM27Q9P2N5 1060 aaKnown RBP27.67■■■□□ 2.02
EPCAM-201ENST00000263735 HACL1Q9UJ83 578 aa27.67■■■□□ 2.02
EPCAM-201ENST00000263735 PALM3A6NDB9 673 aaPredicted RBP27.66■■■□□ 2.02
EPCAM-201ENST00000263735 RASA3Q14644 834 aa27.66■■■□□ 2.02
EPCAM-201ENST00000263735 LZTS2Q9BRK4 669 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms