RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 GRM8O00222 908 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 SDSP20132 328 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 KRT33BQ14525 404 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 RAPH1Q70E73 1250 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 CSGALNACT2Q8N6G5 542 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 FAM8A1Q9UBU6 413 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 UBAP1LF5GYI3 381 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 TTC4O95801 387 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 IFNB1P01574 187 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 YWHAEP62258 255 aaKnown RBP12.55□□□□□ -0.4
PTPN4-201ENST00000263708 TRIM14Q14142 442 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 TRPC6Q9Y210 931 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 A0A1B0GVL5 298 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 GSTA4O15217 222 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 EXOC3O60645 756 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 RAP1GDS1P52306 607 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 SLC9C1Q4G0N8 1177 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 STK25O00506 426 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 UFL1O94874 794 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 KIF22Q14807 665 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 IQCB1Q15051 598 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 ATF7P17544 494 aaPredicted RBP12.55□□□□□ -0.4
PTPN4-201ENST00000263708 CALCRLQ16602 461 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 FGD4Q96M96 766 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 IL15P40933 162 aaPredicted RBP12.55□□□□□ -0.4
PTPN4-201ENST00000263708 COPS6Q7L5N1 327 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 GLG1Q92896 1179 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 TEKT2Q9UIF3 430 aa12.55□□□□□ -0.4
PTPN4-201ENST00000263708 RNF113AO15541 343 aaKnown RBP12.54□□□□□ -0.4
PTPN4-201ENST00000263708 TBCCQ15814 346 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 HAUS1Q96CS2 278 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 LMCD1Q9NZU5 365 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 TUBBP07437 444 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 SLC39A6Q13433 755 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 MYSM1Q5VVJ2 828 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 DNM3Q9UQ16 869 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 FNDC3AQ9Y2H6 1198 aaKnown RBP12.54□□□□□ -0.4
PTPN4-201ENST00000263708 BMP2KLQ5H9B9 411 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 ZNF449Q6P9G9 518 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 TCP10Q12799 353 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 FAM102BQ5T8I3 360 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 PNMA2Q9UL42 364 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 POLR2DO15514 142 aaKnown RBP12.54□□□□□ -0.4
PTPN4-201ENST00000263708 PRPSAP1Q14558 356 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 TTC6Q86TZ1 520 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 BAIAP2L1Q9UHR4 511 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 CABS1Q96KC9 395 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 NBPF3Q9H094 633 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 ZC4H2Q9NQZ6 224 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 RAB20Q9NX57 234 aa12.54□□□□□ -0.4
PTPN4-201ENST00000263708 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTPN4-201ENST00000263708 LMNB1P20700 586 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 MCUQ8NE86 351 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 RGS16O15492 202 aaPredicted RBP12.53□□□□□ -0.4
PTPN4-201ENST00000263708 TRIM35Q9UPQ4 493 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 PYGLP06737 847 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 DDB1Q16531 1140 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 LONRF2Q1L5Z9 754 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 ATP6V1E2Q96A05 226 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 FLOT1O75955 427 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 ARHGAP25P42331 645 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 RSBN1LQ6PCB5 846 aaPredicted RBP12.53□□□□□ -0.4
PTPN4-201ENST00000263708 SUCLA2Q9P2R7 463 aaPredicted RBP12.53□□□□□ -0.4
PTPN4-201ENST00000263708 FAN1Q9Y2M0 1017 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 IRS4O14654 1257 aaPredicted RBP12.53□□□□□ -0.4
PTPN4-201ENST00000263708 PPFIA4O75335 1185 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 WDR7Q9Y4E6 1490 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 ZBBXA8MT70 800 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 TAB3Q8N5C8 712 aaPredicted RBP12.53□□□□□ -0.4
PTPN4-201ENST00000263708 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 SLC5A4Q9NY91 659 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 SLC13A4Q9UKG4 626 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 OCM2P0CE71 109 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 OCMP0CE72 109 aaPredicted RBP12.53□□□□□ -0.4
PTPN4-201ENST00000263708 KAZNQ674X7 775 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 GNPATO15228 680 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 MTMR3Q13615 1198 aa12.53□□□□□ -0.4
PTPN4-201ENST00000263708 MSH6P52701 1360 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 PAK1Q13153 545 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 POLKQ9UBT6 870 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 PRG4Q92954 1404 aaPredicted RBP12.52□□□□□ -0.4
PTPN4-201ENST00000263708 PPP1R2P41236 205 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 SFMBT2Q5VUG0 894 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 DYMQ7RTS9 669 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 RAB44Q7Z6P3 723 aaPredicted RBP12.52□□□□□ -0.4
PTPN4-201ENST00000263708 KRT82Q9NSB4 513 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 ARHGEF16Q5VV41 709 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 TPH2Q8IWU9 490 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 PPWD1Q96BP3 646 aaKnown RBP12.52□□□□□ -0.4
PTPN4-201ENST00000263708 PAGR1Q9BTK6 254 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 PARP2Q9UGN5 583 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 MAGED2Q9UNF1 606 aaPredicted RBP12.52□□□□□ -0.4
PTPN4-201ENST00000263708 EHBP1L1Q8N3D4 1523 aa12.52□□□□□ -0.4
PTPN4-201ENST00000263708 HEXIM1O94992 359 aaKnown RBP12.52□□□□□ -0.41
PTPN4-201ENST00000263708 GUCY2FP51841 1108 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 ZBTB17Q13105 803 aa12.52□□□□□ -0.41
PTPN4-201ENST00000263708 CFAP221Q4G0U5 840 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms