RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 SMARCC2Q8TAQ2 1214 aa26.52■■□□□ 1.84
UFD1-201ENST00000263202 FAM217BQ9NTX9 383 aaPredicted RBP26.52■■□□□ 1.84
UFD1-201ENST00000263202 MYH4Q9Y623 1939 aa26.51■■□□□ 1.84
UFD1-201ENST00000263202 DHX16O60231 1041 aaKnown RBP26.51■■□□□ 1.83
UFD1-201ENST00000263202 JAK2O60674 1132 aa26.51■■□□□ 1.83
UFD1-201ENST00000263202 CDC27P30260 824 aa26.51■■□□□ 1.83
UFD1-201ENST00000263202 DEFB129Q9H1M3 183 aa26.51■■□□□ 1.83
UFD1-201ENST00000263202 GGA3Q9NZ52 723 aa26.51■■□□□ 1.83
UFD1-201ENST00000263202 TROAPQ12815 778 aa26.51■■□□□ 1.83
UFD1-201ENST00000263202 KAT14Q9H8E8 782 aa26.51■■□□□ 1.83
UFD1-201ENST00000263202 MTMR4Q9NYA4 1195 aa26.51■■□□□ 1.83
UFD1-201ENST00000263202 STX8Q9UNK0 236 aa26.51■■□□□ 1.83
UFD1-201ENST00000263202 DDAH1O94760 285 aa26.5■■□□□ 1.83
UFD1-201ENST00000263202 ADD1P35611 737 aaKnown RBP26.5■■□□□ 1.83
UFD1-201ENST00000263202 MAP3K10Q02779 954 aa26.5■■□□□ 1.83
UFD1-201ENST00000263202 NUP133Q8WUM0 1156 aa26.5■■□□□ 1.83
UFD1-201ENST00000263202 TMEM47Q9BQJ4 181 aa26.5■■□□□ 1.83
UFD1-201ENST00000263202 MPHOSPH10O00566 681 aaKnown RBP26.49■■□□□ 1.83
UFD1-201ENST00000263202 CALM1P0DP23 149 aa26.49■■□□□ 1.83
UFD1-201ENST00000263202 CALM2P0DP24 149 aa26.49■■□□□ 1.83
UFD1-201ENST00000263202 CALM3P0DP25 149 aa26.49■■□□□ 1.83
UFD1-201ENST00000263202 FANCBQ8NB91 859 aa26.49■■□□□ 1.83
UFD1-201ENST00000263202 WDR90Q96KV7 1748 aa26.49■■□□□ 1.83
UFD1-201ENST00000263202 PTPDC1A2A3K4 754 aa26.49■■□□□ 1.83
UFD1-201ENST00000263202 RRP1BQ14684 758 aaKnown RBP26.49■■□□□ 1.83
UFD1-201ENST00000263202 RTN1Q16799 776 aa26.49■■□□□ 1.83
UFD1-201ENST00000263202 PNMA1Q8ND90 353 aa26.49■■□□□ 1.83
UFD1-201ENST00000263202 PITPNM2Q9BZ72 1349 aa26.48■■□□□ 1.83
UFD1-201ENST00000263202 CPLX1O14810 134 aa26.48■■□□□ 1.83
UFD1-201ENST00000263202 SHROOM1Q2M3G4 852 aaPredicted RBP26.48■■□□□ 1.83
UFD1-201ENST00000263202 MIGA2Q7L4E1 593 aa26.48■■□□□ 1.83
UFD1-201ENST00000263202 GDF11O95390 407 aa26.47■■□□□ 1.83
UFD1-201ENST00000263202 PKP1Q13835 747 aa26.47■■□□□ 1.83
UFD1-201ENST00000263202 NTRK3Q16288 839 aa26.47■■□□□ 1.83
UFD1-201ENST00000263202 ABCB5Q2M3G0 1257 aa26.47■■□□□ 1.83
UFD1-201ENST00000263202 TOP1P11387 765 aaKnown RBP26.46■■□□□ 1.83
UFD1-201ENST00000263202 HMGN5P82970 282 aaKnown RBP26.46■■□□□ 1.83
UFD1-201ENST00000263202 PPP2R5BQ15173 497 aa26.46■■□□□ 1.83
UFD1-201ENST00000263202 CLEC10AQ8IUN9 316 aa26.46■■□□□ 1.83
UFD1-201ENST00000263202 DDX11Q96FC9 970 aa26.46■■□□□ 1.83
UFD1-201ENST00000263202 ATAD5Q96QE3 1844 aa26.46■■□□□ 1.83
UFD1-201ENST00000263202 JAG1P78504 1218 aa26.46■■□□□ 1.83
UFD1-201ENST00000263202 NUCB2P80303 420 aa26.46■■□□□ 1.83
UFD1-201ENST00000263202 TMEM179Q6ZVK1 233 aa26.46■■□□□ 1.83
UFD1-201ENST00000263202 CCDC196A0A1B0GTZ2 297 aa26.45■■□□□ 1.82
UFD1-201ENST00000263202 TTLL1O95922 423 aa26.45■■□□□ 1.82
UFD1-201ENST00000263202 GUCY1A2P33402 732 aa26.45■■□□□ 1.82
UFD1-201ENST00000263202 EPHX2P34913 555 aa26.45■■□□□ 1.82
UFD1-201ENST00000263202 CPLX2Q6PUV4 134 aaKnown RBP26.45■■□□□ 1.82
UFD1-201ENST00000263202 USP50Q70EL3 339 aaPredicted RBP26.45■■□□□ 1.82
UFD1-201ENST00000263202 PPP2R3BQ9Y5P8 575 aa26.45■■□□□ 1.82
UFD1-201ENST00000263202 PPFIA3O75145 1194 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 RAB3GAP1Q15042 981 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 NBPF12Q5TAG4 269 aaPredicted RBP26.44■■□□□ 1.82
UFD1-201ENST00000263202 MAP3K14Q99558 947 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 CDKL5O76039 1030 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 GH2P01242 217 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 FDPSP14324 419 aaKnown RBP26.44■■□□□ 1.82
UFD1-201ENST00000263202 SYT1P21579 422 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 SEPT2Q15019 361 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 PPP4R3BQ5MIZ7 849 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 KANSL2Q9H9L4 492 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 RBM28Q9NW13 759 aaKnown RBP26.44■■□□□ 1.82
UFD1-201ENST00000263202 CLIP2Q9UDT6 1046 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 ZDHHC9Q9Y397 364 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 MYH6P13533 1939 aa26.44■■□□□ 1.82
UFD1-201ENST00000263202 POTECB2RU33 542 aa26.43■■□□□ 1.82
UFD1-201ENST00000263202 IFNAR1P17181 557 aa26.43■■□□□ 1.82
UFD1-201ENST00000263202 CTCFLQ8NI51 663 aaPredicted RBP26.43■■□□□ 1.82
UFD1-201ENST00000263202 CABP5Q9NP86 173 aa26.43■■□□□ 1.82
UFD1-201ENST00000263202 FAM184AQ8NB25 1140 aa26.42■■□□□ 1.82
UFD1-201ENST00000263202 IQCA1LA6NCM1 817 aa26.42■■□□□ 1.82
UFD1-201ENST00000263202 PHF20L1A8MW92 1017 aa26.42■■□□□ 1.82
UFD1-201ENST00000263202 LARP1BQ659C4 914 aaKnown RBP26.42■■□□□ 1.82
UFD1-201ENST00000263202 DCPSQ96C86 337 aaKnown RBP26.42■■□□□ 1.82
UFD1-201ENST00000263202 NYAP2Q9P242 653 aa26.42■■□□□ 1.82
UFD1-201ENST00000263202 STX6O43752 255 aa26.41■■□□□ 1.82
UFD1-201ENST00000263202 BRD1O95696 1058 aa26.41■■□□□ 1.82
UFD1-201ENST00000263202 PDCP20941 246 aa26.41■■□□□ 1.82
UFD1-201ENST00000263202 CAP2P40123 477 aa26.41■■□□□ 1.82
UFD1-201ENST00000263202 GRM4Q14833 912 aa26.41■■□□□ 1.82
UFD1-201ENST00000263202 PRAMEF18Q5VWM3 479 aa26.41■■□□□ 1.82
UFD1-201ENST00000263202 PHKBQ93100 1093 aa26.41■■□□□ 1.82
UFD1-201ENST00000263202 TAF1DQ9H5J8 278 aaPredicted RBP26.41■■□□□ 1.82
UFD1-201ENST00000263202 ORC3Q9UBD5 711 aaPredicted RBP26.41■■□□□ 1.82
UFD1-201ENST00000263202 EEF2P13639 858 aaKnown RBP26.4■■□□□ 1.82
UFD1-201ENST00000263202 NBPF11Q86T75 865 aa26.4■■□□□ 1.82
UFD1-201ENST00000263202 SIAH1Q8IUQ4 282 aa26.4■■□□□ 1.82
UFD1-201ENST00000263202 CMTR1Q8N1G2 835 aaKnown RBP26.4■■□□□ 1.82
UFD1-201ENST00000263202 LRRC47Q8N1G4 583 aaKnown RBP26.4■■□□□ 1.82
UFD1-201ENST00000263202 MKL1Q969V6 931 aa26.4■■□□□ 1.82
UFD1-201ENST00000263202 HOOK2Q96ED9 719 aa26.4■■□□□ 1.82
UFD1-201ENST00000263202 KIF3AQ9Y496 699 aa26.4■■□□□ 1.82
UFD1-201ENST00000263202 PLEKHA8P1O95397 391 aa26.39■■□□□ 1.82
UFD1-201ENST00000263202 KIF5BP33176 963 aa26.39■■□□□ 1.82
UFD1-201ENST00000263202 ICA1Q05084 483 aa26.39■■□□□ 1.82
UFD1-201ENST00000263202 TMTC3Q6ZXV5 915 aa26.39■■□□□ 1.82
UFD1-201ENST00000263202 ZC3H15Q8WU90 426 aaKnown RBP26.39■■□□□ 1.82
UFD1-201ENST00000263202 ZBTB21Q9ULJ3 1066 aa26.39■■□□□ 1.82
UFD1-201ENST00000263202 FMNL1O95466 1100 aaPredicted RBP26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms