RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MYO1BO43795 1136 aa26.67■■□□□ 1.86
SMARCB1-201ENST00000263121 AKR1B1P15121 316 aa26.67■■□□□ 1.86
SMARCB1-201ENST00000263121 CRACR2BQ8N4Y2 399 aaPredicted RBP26.67■■□□□ 1.86
SMARCB1-201ENST00000263121 RBM28Q9NW13 759 aaKnown RBP26.67■■□□□ 1.86
SMARCB1-201ENST00000263121 NBPF9Q3BBW0 867 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 MICALL2Q8IY33 904 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 PHKBQ93100 1093 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 CEP95Q96GE4 821 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 FMNL1O95466 1100 aaPredicted RBP26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 SLURP2P0DP57 97 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 NBPF11Q86T75 865 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 FAM83AQ86UY5 434 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 PNMA1Q8ND90 353 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 CCDC17Q96LX7 622 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 MAP3K14Q99558 947 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 TMEM47Q9BQJ4 181 aa26.66■■□□□ 1.86
SMARCB1-201ENST00000263121 H3BQV1 296 aa26.65■■□□□ 1.86
SMARCB1-201ENST00000263121 IFFO2Q5TF58 517 aa26.65■■□□□ 1.86
SMARCB1-201ENST00000263121 TATDN1Q6P1N9 297 aa26.65■■□□□ 1.86
SMARCB1-201ENST00000263121 RGS22Q8NE09 1264 aa26.65■■□□□ 1.86
SMARCB1-201ENST00000263121 CHAMP1Q96JM3 812 aa26.65■■□□□ 1.86
SMARCB1-201ENST00000263121 VEZTQ9HBM0 779 aa26.65■■□□□ 1.86
SMARCB1-201ENST00000263121 CNOT7Q9UIV1 285 aaKnown RBP26.65■■□□□ 1.86
SMARCB1-201ENST00000263121 STX8Q9UNK0 236 aa26.65■■□□□ 1.86
SMARCB1-201ENST00000263121 EGFRP00533 1210 aa26.64■■□□□ 1.86
SMARCB1-201ENST00000263121 SSRP1Q08945 709 aaKnown RBP26.64■■□□□ 1.86
SMARCB1-201ENST00000263121 CSRNP1Q96S65 589 aa26.64■■□□□ 1.86
SMARCB1-201ENST00000263121 ATP6V1DQ9Y5K8 247 aa26.64■■□□□ 1.86
SMARCB1-201ENST00000263121 FUT2Q10981 343 aa26.63■■□□□ 1.85
SMARCB1-201ENST00000263121 CTCFLQ8NI51 663 aaPredicted RBP26.63■■□□□ 1.85
SMARCB1-201ENST00000263121 SLC26A6Q9BXS9 759 aa26.63■■□□□ 1.85
SMARCB1-201ENST00000263121 MTMR4Q9NYA4 1195 aa26.63■■□□□ 1.85
SMARCB1-201ENST00000263121 FAM196BA6NMK8 535 aa26.63■■□□□ 1.85
SMARCB1-201ENST00000263121 MCTP1Q6DN14 999 aa26.63■■□□□ 1.85
SMARCB1-201ENST00000263121 TMTC3Q6ZXV5 915 aa26.63■■□□□ 1.85
SMARCB1-201ENST00000263121 GPC2Q8N158 579 aa26.63■■□□□ 1.85
SMARCB1-201ENST00000263121 TRIM34Q9BYJ4 488 aa26.63■■□□□ 1.85
SMARCB1-201ENST00000263121 GOLGA6L22H0YM25 854 aa26.62■■□□□ 1.85
SMARCB1-201ENST00000263121 TOP1P11387 765 aaKnown RBP26.62■■□□□ 1.85
SMARCB1-201ENST00000263121 FOSBP53539 338 aa26.62■■□□□ 1.85
SMARCB1-201ENST00000263121 C8orf76Q96K31 380 aa26.62■■□□□ 1.85
SMARCB1-201ENST00000263121 HERC5Q9UII4 1024 aaKnown RBP26.62■■□□□ 1.85
SMARCB1-201ENST00000263121 PLEKHA8P1O95397 391 aa26.61■■□□□ 1.85
SMARCB1-201ENST00000263121 RESTQ13127 1097 aa26.61■■□□□ 1.85
SMARCB1-201ENST00000263121 GRM4Q14833 912 aa26.61■■□□□ 1.85
SMARCB1-201ENST00000263121 FERMT3Q86UX7 667 aa26.61■■□□□ 1.85
SMARCB1-201ENST00000263121 TRIM22Q8IYM9 498 aa26.61■■□□□ 1.85
SMARCB1-201ENST00000263121 CMTR1Q8N1G2 835 aaKnown RBP26.61■■□□□ 1.85
SMARCB1-201ENST00000263121 FBXO18Q8NFZ0 1043 aa26.61■■□□□ 1.85
SMARCB1-201ENST00000263121 ALG1Q9BT22 464 aa26.61■■□□□ 1.85
SMARCB1-201ENST00000263121 RNF26Q9BY78 433 aaPredicted RBP26.61■■□□□ 1.85
SMARCB1-201ENST00000263121 PGAP2Q9UHJ9 254 aa26.61■■□□□ 1.85
SMARCB1-201ENST00000263121 KIF5BP33176 963 aa26.6■■□□□ 1.85
SMARCB1-201ENST00000263121 CERKLQ49MI3 558 aaPredicted RBP26.6■■□□□ 1.85
SMARCB1-201ENST00000263121 RBM26Q5T8P6 1007 aaKnown RBP26.6■■□□□ 1.85
SMARCB1-201ENST00000263121 SAMD7Q7Z3H4 446 aa26.6■■□□□ 1.85
SMARCB1-201ENST00000263121 PTMSP20962 102 aa26.6■■□□□ 1.85
SMARCB1-201ENST00000263121 FOXD4L6Q3SYB3 417 aaPredicted RBP26.6■■□□□ 1.85
SMARCB1-201ENST00000263121 FOXD4L3Q6VB84 417 aaPredicted RBP26.6■■□□□ 1.85
SMARCB1-201ENST00000263121 WASF1Q92558 559 aa26.6■■□□□ 1.85
SMARCB1-201ENST00000263121 AIFM3Q96NN9 605 aa26.6■■□□□ 1.85
SMARCB1-201ENST00000263121 DEXIO95424 95 aa26.59■■□□□ 1.85
SMARCB1-201ENST00000263121 KIF4BQ2VIQ3 1234 aa26.59■■□□□ 1.85
SMARCB1-201ENST00000263121 TBC1D10BQ4KMP7 808 aaPredicted RBP26.59■■□□□ 1.85
SMARCB1-201ENST00000263121 TMEM39BQ9GZU3 492 aa26.59■■□□□ 1.85
SMARCB1-201ENST00000263121 ZSCAN16Q9H4T2 348 aaPredicted RBP26.59■■□□□ 1.85
SMARCB1-201ENST00000263121 GPRC5DQ9NZD1 345 aa26.59■■□□□ 1.85
SMARCB1-201ENST00000263121 CNTNAP5Q8WYK1 1306 aa26.58■■□□□ 1.85
SMARCB1-201ENST00000263121 UBE2Q2LH0YL09 131 aa26.58■■□□□ 1.85
SMARCB1-201ENST00000263121 GUCY1B3Q02153 619 aa26.58■■□□□ 1.85
SMARCB1-201ENST00000263121 CCDC82Q8N4S0 544 aa26.58■■□□□ 1.85
SMARCB1-201ENST00000263121 SRBD1Q8N5C6 995 aaKnown RBP26.58■■□□□ 1.85
SMARCB1-201ENST00000263121 RNF181Q9P0P0 153 aa26.58■■□□□ 1.85
SMARCB1-201ENST00000263121 H7C1D1 291 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 MPHOSPH10O00566 681 aaKnown RBP26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 PRPF3O43395 683 aaKnown RBP26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 TTLL1O95922 423 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 GUCY1A2P33402 732 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 TNNI2P48788 182 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 PPP4R3BQ5MIZ7 849 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 MAD2L2Q9UI95 211 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 TBC1D12O60347 775 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 TNFAIP1Q13829 316 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 OTUD7BQ6GQQ9 843 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 CLEC10AQ8IUN9 316 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.57■■□□□ 1.842e-8■■□□□ 13.5
SMARCB1-201ENST00000263121 GJB4Q9NTQ9 266 aa26.57■■□□□ 1.84
SMARCB1-201ENST00000263121 MYH6P13533 1939 aa26.56■■□□□ 1.84
SMARCB1-201ENST00000263121 CDAN1Q8IWY9 1227 aa26.56■■□□□ 1.84
SMARCB1-201ENST00000263121 LMBRD1Q9NUN5 540 aa26.56■■□□□ 1.84
SMARCB1-201ENST00000263121 PALM3A6NDB9 673 aaPredicted RBP26.55■■□□□ 1.84
SMARCB1-201ENST00000263121 GNAQP50148 359 aa26.55■■□□□ 1.84
SMARCB1-201ENST00000263121 DNM1Q05193 864 aaKnown RBP26.55■■□□□ 1.84
SMARCB1-201ENST00000263121 RASA3Q14644 834 aa26.55■■□□□ 1.84
SMARCB1-201ENST00000263121 SHROOM1Q2M3G4 852 aaPredicted RBP26.55■■□□□ 1.84
SMARCB1-201ENST00000263121 TMEM179Q6ZVK1 233 aa26.55■■□□□ 1.84
SMARCB1-201ENST00000263121 STAG2Q8N3U4 1231 aa26.55■■□□□ 1.84
SMARCB1-201ENST00000263121 TCHHQ07283 1943 aa26.55■■□□□ 1.84
SMARCB1-201ENST00000263121 ASTN2O75129 1339 aaPredicted RBP26.54■■□□□ 1.84
SMARCB1-201ENST00000263121 MAP3K10Q02779 954 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms