RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 ERVK-24P63145 666 aa27.9■■■□□ 2.06
HMG20B-201ENST00000262949 USP17L24Q0WX57 530 aa27.9■■■□□ 2.06
HMG20B-201ENST00000262949 C12orf42Q96LP6 360 aa27.9■■■□□ 2.06
HMG20B-201ENST00000262949 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.9■■■□□ 2.06
HMG20B-201ENST00000262949 BOLA2Q9H3K6 86 aa27.9■■■□□ 2.06
HMG20B-201ENST00000262949 RBPJLQ9UBG7 517 aa27.9■■■□□ 2.06
HMG20B-201ENST00000262949 COLQQ9Y215 455 aaPredicted RBP27.9■■■□□ 2.06
HMG20B-201ENST00000262949 KIAA1683Q9H0B3 1180 aa27.89■■■□□ 2.06
HMG20B-201ENST00000262949 HMX1Q9NP08 348 aaPredicted RBP27.89■■■□□ 2.06
HMG20B-201ENST00000262949 ATP5JP18859 108 aa27.88■■■□□ 2.05
HMG20B-201ENST00000262949 CYP2B6P20813 491 aa27.88■■■□□ 2.05
HMG20B-201ENST00000262949 SHMT1P34896 483 aa27.88■■■□□ 2.05
HMG20B-201ENST00000262949 TRMT44Q8IYL2 757 aaKnown RBP27.88■■■□□ 2.05
HMG20B-201ENST00000262949 RPTORQ8N122 1335 aa27.88■■■□□ 2.05
HMG20B-201ENST00000262949 MPHOSPH10O00566 681 aaKnown RBP27.87■■■□□ 2.05
HMG20B-201ENST00000262949 CCNA1P78396 465 aa27.87■■■□□ 2.05
HMG20B-201ENST00000262949 SDR42E1Q8WUS8 393 aa27.87■■■□□ 2.05
HMG20B-201ENST00000262949 LRRCC1Q9C099 1032 aa27.87■■■□□ 2.05
HMG20B-201ENST00000262949 RABGAP1Q9Y3P9 1069 aa27.87■■■□□ 2.05
HMG20B-201ENST00000262949 TCRBV5S4A2TA0A5A2 114 aa27.86■■■□□ 2.05
HMG20B-201ENST00000262949 PEX10O60683 326 aa27.86■■■□□ 2.05
HMG20B-201ENST00000262949 XRCC5P13010 732 aaKnown RBP27.86■■■□□ 2.05
HMG20B-201ENST00000262949 AMOTL1Q8IY63 956 aa27.86■■■□□ 2.05
HMG20B-201ENST00000262949 LCORLQ8N3X6 602 aa27.86■■■□□ 2.05
HMG20B-201ENST00000262949 EDC3Q96F86 508 aaKnown RBP27.86■■■□□ 2.05
HMG20B-201ENST00000262949 CRISPLD2Q9H0B8 497 aa27.86■■■□□ 2.05
HMG20B-201ENST00000262949 DCP1AQ9NPI6 582 aaPredicted RBP27.86■■■□□ 2.05
HMG20B-201ENST00000262949 GLRX3O76003 335 aaKnown RBP27.85■■■□□ 2.05
HMG20B-201ENST00000262949 VCAM1P19320 739 aa27.85■■■□□ 2.05
HMG20B-201ENST00000262949 GABPAQ06546 454 aa27.85■■■□□ 2.05
HMG20B-201ENST00000262949 Q3C1V9 767 aa27.85■■■□□ 2.05
HMG20B-201ENST00000262949 CATSPERGQ6ZRH7 1159 aa27.85■■■□□ 2.05
HMG20B-201ENST00000262949 PLEKHH3Q7Z736 793 aa27.85■■■□□ 2.05
HMG20B-201ENST00000262949 ACER1Q8TDN7 264 aa27.85■■■□□ 2.05
HMG20B-201ENST00000262949 DDRGK1Q96HY6 314 aa27.85■■■□□ 2.05
HMG20B-201ENST00000262949 HAUS7Q99871 368 aa27.85■■■□□ 2.05
HMG20B-201ENST00000262949 ARMT1Q9H993 441 aa27.85■■■□□ 2.05
HMG20B-201ENST00000262949 SWAP70Q9UH65 585 aa27.85■■■□□ 2.05
HMG20B-201ENST00000262949 EVI5O60447 810 aa27.84■■■□□ 2.05
HMG20B-201ENST00000262949 RGS2P41220 211 aa27.84■■■□□ 2.05
HMG20B-201ENST00000262949 GPR142Q7Z601 462 aa27.84■■■□□ 2.05
HMG20B-201ENST00000262949 ANKLE1Q8NAG6 615 aa27.84■■■□□ 2.05
HMG20B-201ENST00000262949 TRIB2Q92519 343 aa27.84■■■□□ 2.05
HMG20B-201ENST00000262949 ATP8A2Q9NTI2 1148 aa27.84■■■□□ 2.05
HMG20B-201ENST00000262949 ZKSCAN1P17029 563 aaPredicted RBP27.83■■■□□ 2.05
HMG20B-201ENST00000262949 ADD2P35612 726 aa27.83■■■□□ 2.05
HMG20B-201ENST00000262949 SEPT2Q15019 361 aa27.83■■■□□ 2.05
HMG20B-201ENST00000262949 ZSCAN25Q6NSZ9 544 aa27.83■■■□□ 2.05
HMG20B-201ENST00000262949 CHRDL2Q6WN34 429 aa27.83■■■□□ 2.05
HMG20B-201ENST00000262949 NECAB2Q7Z6G3 386 aa27.83■■■□□ 2.05
HMG20B-201ENST00000262949 PORCNQ9H237 461 aa27.83■■■□□ 2.05
HMG20B-201ENST00000262949 MBD4O95243 580 aa27.82■■■□□ 2.04
HMG20B-201ENST00000262949 TRIM32Q13049 653 aa27.82■■■□□ 2.04
HMG20B-201ENST00000262949 WDR78Q5VTH9 848 aa27.82■■■□□ 2.04
HMG20B-201ENST00000262949 PAWRQ96IZ0 340 aaKnown RBP27.82■■■□□ 2.04
HMG20B-201ENST00000262949 RPAP3Q9H6T3 665 aaPredicted RBP27.82■■■□□ 2.04
HMG20B-201ENST00000262949 NAV1Q8NEY1 1877 aa27.82■■■□□ 2.04
HMG20B-201ENST00000262949 PRKAR2AP13861 404 aaKnown RBP27.8■■■□□ 2.04
HMG20B-201ENST00000262949 GUCY1A2P33402 732 aa27.8■■■□□ 2.04
HMG20B-201ENST00000262949 UBE3CQ15386 1083 aa27.8■■■□□ 2.04
HMG20B-201ENST00000262949 C20orf194Q5TEA3 1177 aa27.8■■■□□ 2.04
HMG20B-201ENST00000262949 TMEM179Q6ZVK1 233 aa27.8■■■□□ 2.04
HMG20B-201ENST00000262949 CYP2D6P10635 497 aa27.79■■■□□ 2.04
HMG20B-201ENST00000262949 FXR1P51114 621 aaKnown RBP eCLIP27.79■■■□□ 2.04
HMG20B-201ENST00000262949 MORN1Q5T089 497 aa27.79■■■□□ 2.04
HMG20B-201ENST00000262949 LBX2Q6XYB7 198 aa27.79■■■□□ 2.04
HMG20B-201ENST00000262949 APBA2Q99767 749 aa27.79■■■□□ 2.04
HMG20B-201ENST00000262949 IVNS1ABPQ9Y6Y0 642 aa27.79■■■□□ 2.04
HMG20B-201ENST00000262949 PRKAB2O43741 272 aa27.78■■■□□ 2.04
HMG20B-201ENST00000262949 MAP3K21Q5TCX8 1036 aa27.78■■■□□ 2.04
HMG20B-201ENST00000262949 USP6NLQ92738 828 aa27.78■■■□□ 2.04
HMG20B-201ENST00000262949 ARHGEF10LQ9HCE6 1279 aa27.78■■■□□ 2.04
HMG20B-201ENST00000262949 HOXC10Q9NYD6 342 aa27.78■■■□□ 2.04
HMG20B-201ENST00000262949 CNMDO75829 334 aa27.77■■■□□ 2.04
HMG20B-201ENST00000262949 MAP2K5Q13163 448 aa27.77■■■□□ 2.04
HMG20B-201ENST00000262949 POTEEQ6S8J3 1075 aa27.77■■■□□ 2.04
HMG20B-201ENST00000262949 SLC44A5Q8NCS7 719 aa27.77■■■□□ 2.04
HMG20B-201ENST00000262949 DYNLL2Q96FJ2 89 aa27.77■■■□□ 2.04
HMG20B-201ENST00000262949 GPATCH3Q96I76 525 aa27.77■■■□□ 2.04
HMG20B-201ENST00000262949 CCDC17Q96LX7 622 aa27.77■■■□□ 2.04
HMG20B-201ENST00000262949 TANGO6Q9C0B7 1094 aa27.77■■■□□ 2.04
HMG20B-201ENST00000262949 NBPF3Q9H094 633 aa27.77■■■□□ 2.04
HMG20B-201ENST00000262949 SH2D4AQ9H788 454 aa27.77■■■□□ 2.04
HMG20B-201ENST00000262949 DDX60LQ5H9U9 1706 aaKnown RBP27.77■■■□□ 2.04
HMG20B-201ENST00000262949 SPDYE16A6NNV3 312 aaPredicted RBP27.76■■■□□ 2.03
HMG20B-201ENST00000262949 SMARCA5O60264 1052 aaPredicted RBP27.76■■■□□ 2.03
HMG20B-201ENST00000262949 EVX2Q03828 476 aa27.76■■■□□ 2.03
HMG20B-201ENST00000262949 COG2Q14746 738 aa27.76■■■□□ 2.03
HMG20B-201ENST00000262949 SLFNL1Q499Z3 407 aa27.76■■■□□ 2.03
HMG20B-201ENST00000262949 DIS3LQ8TF46 1054 aaKnown RBP27.76■■■□□ 2.03
HMG20B-201ENST00000262949 ECHDC1Q9NTX5 307 aa27.76■■■□□ 2.03
HMG20B-201ENST00000262949 SLC4A4Q9Y6R1 1079 aa27.76■■■□□ 2.03
HMG20B-201ENST00000262949 TRIOBPQ9H2D6 2365 aa27.75■■■□□ 2.03
HMG20B-201ENST00000262949 SLC15A5A6NIM6 579 aa27.75■■■□□ 2.03
HMG20B-201ENST00000262949 CACNB2Q08289 660 aaPredicted RBP27.75■■■□□ 2.03
HMG20B-201ENST00000262949 RBM27Q9P2N5 1060 aaKnown RBP27.75■■■□□ 2.03
HMG20B-201ENST00000262949 OGDHLQ9ULD0 1010 aa27.75■■■□□ 2.03
HMG20B-201ENST00000262949 PLXNB2O15031 1838 aa27.75■■■□□ 2.03
HMG20B-201ENST00000262949 A0A1W2PRG0 241 aa27.74■■■□□ 2.03
HMG20B-201ENST00000262949 USP17L12C9JPN9 530 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms