RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 PPFIA3O75145 1194 aa15.15■□□□□ 0.02
VAMP7-201ENST00000262640 FMNL1O95466 1100 aaPredicted RBP15.15■□□□□ 0.02
VAMP7-201ENST00000262640 NOVP48745 357 aa15.15■□□□□ 0.02
VAMP7-201ENST00000262640 PNMA1Q8ND90 353 aa15.15■□□□□ 0.02
VAMP7-201ENST00000262640 CTCFLQ8NI51 663 aaPredicted RBP15.15■□□□□ 0.02
VAMP7-201ENST00000262640 AKR1B1P15121 316 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 FAM83AQ86UY5 434 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 TRIM22Q8IYM9 498 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 WASF1Q92558 559 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 VEZTQ9HBM0 779 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 STX8Q9UNK0 236 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 SHTN1A0MZ66 631 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 KIF5BP33176 963 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 PPP4R3BQ5MIZ7 849 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 MCTP1Q6DN14 999 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 PHKBQ93100 1093 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 CEP95Q96GE4 821 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 C8orf76Q96K31 380 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 CSRNP1Q96S65 589 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 TMEM47Q9BQJ4 181 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.14■□□□□ 0.01
VAMP7-201ENST00000262640 SLC26A6Q9BXS9 759 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 DNAJC18Q9H819 358 aa15.14■□□□□ 0.01
VAMP7-201ENST00000262640 CNOT7Q9UIV1 285 aaKnown RBP15.14■□□□□ 0.01
VAMP7-201ENST00000262640 CNTNAP1P78357 1384 aa15.13■□□□□ 0.01
VAMP7-201ENST00000262640 SIPA1L1O43166 1804 aa15.13■□□□□ 0.01
VAMP7-201ENST00000262640 IGKV6D-41A0A0C4DH26 115 aa15.13■□□□□ 0.01
VAMP7-201ENST00000262640 TOP1P11387 765 aaKnown RBP15.13■□□□□ 0.01
VAMP7-201ENST00000262640 NBPF9Q3BBW0 867 aa15.13■□□□□ 0.01
VAMP7-201ENST00000262640 TATDN1Q6P1N9 297 aa15.12■□□□□ 0.01
VAMP7-201ENST00000262640 NBPF11Q86T75 865 aa15.12■□□□□ 0.01
VAMP7-201ENST00000262640 ALG1Q9BT22 464 aa15.12■□□□□ 0.01
VAMP7-201ENST00000262640 ZSCAN16Q9H4T2 348 aaPredicted RBP15.12■□□□□ 0.01
VAMP7-201ENST00000262640 MTMR4Q9NYA4 1195 aa15.12■□□□□ 0.01
VAMP7-201ENST00000262640 HERC5Q9UII4 1024 aaKnown RBP15.12■□□□□ 0.01
VAMP7-201ENST00000262640 YBX3P16989 372 aaKnown RBP eCLIP15.12■□□□□ 0.017e-9■□□□□ 10.7
VAMP7-201ENST00000262640 TMTC3Q6ZXV5 915 aa15.12■□□□□ 0.01
VAMP7-201ENST00000262640 GPC2Q8N158 579 aa15.12■□□□□ 0.01
VAMP7-201ENST00000262640 RNF26Q9BY78 433 aaPredicted RBP15.12■□□□□ 0.01
VAMP7-201ENST00000262640 DICER1Q9UPY3 1922 aaKnown RBP15.12■□□□□ 0.01
VAMP7-201ENST00000262640 DEXIO95424 95 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 TNNI2P48788 182 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 FOSBP53539 338 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 GRM4Q14833 912 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 CERKLQ49MI3 558 aaPredicted RBP15.11■□□□□ 0.01
VAMP7-201ENST00000262640 FERMT3Q86UX7 667 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 FBXO18Q8NFZ0 1043 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 GNAQP50148 359 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 AKAP17AQ02040 695 aaKnown RBP15.11■□□□□ 0.01
VAMP7-201ENST00000262640 FUT2Q10981 343 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 RESTQ13127 1097 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 TNFAIP1Q13829 316 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 MYH8P13535 1937 aa15.11■□□□□ 0.01
VAMP7-201ENST00000262640 H7C1D1 291 aa15.1■□□□□ 0.01
VAMP7-201ENST00000262640 MPHOSPH10O00566 681 aaKnown RBP15.1■□□□□ 0.01
VAMP7-201ENST00000262640 PLEKHA8P1O95397 391 aa15.1■□□□□ 0.01
VAMP7-201ENST00000262640 TTLL1O95922 423 aa15.1■□□□□ 0.01
VAMP7-201ENST00000262640 FOXD4L6Q3SYB3 417 aaPredicted RBP15.1■□□□□ 0.01
VAMP7-201ENST00000262640 RBM26Q5T8P6 1007 aaKnown RBP15.1■□□□□ 0.01
VAMP7-201ENST00000262640 FOXD4L3Q6VB84 417 aaPredicted RBP15.1■□□□□ 0.01
VAMP7-201ENST00000262640 FAM196BA6NMK8 535 aa15.1■□□□□ 0.01
VAMP7-201ENST00000262640 PRPF3O43395 683 aaKnown RBP15.1■□□□□ 0.01
VAMP7-201ENST00000262640 KIF4BQ2VIQ3 1234 aa15.1■□□□□ 0.01
VAMP7-201ENST00000262640 CHAMP1Q96JM3 812 aa15.1■□□□□ 0.01
VAMP7-201ENST00000262640 GUCY1B3Q02153 619 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 TRIM29Q14134 588 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 TBC1D10BQ4KMP7 808 aaPredicted RBP15.09■□□□□ 0.01
VAMP7-201ENST00000262640 SAMD7Q7Z3H4 446 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 CMTR1Q8N1G2 835 aaKnown RBP15.09■□□□□ 0.01
VAMP7-201ENST00000262640 CCDC82Q8N4S0 544 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.09■□□□□ 0.01
VAMP7-201ENST00000262640 RNF181Q9P0P0 153 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 GREB1LQ9C091 1923 aaPredicted RBP15.09■□□□□ 0.01
VAMP7-201ENST00000262640 EGFRP00533 1210 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 SLURP2P0DP57 97 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 TMEM179Q6ZVK1 233 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 LZTS2Q9BRK4 669 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 TMEM39BQ9GZU3 492 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 GPRC5DQ9NZD1 345 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 RBM27Q9P2N5 1060 aaKnown RBP15.09■□□□□ 0.01
VAMP7-201ENST00000262640 SBF1O95248 1867 aa15.09■□□□□ 0.01
VAMP7-201ENST00000262640 CNTNAP5Q8WYK1 1306 aa15.08■□□□□ 0.01
VAMP7-201ENST00000262640 TBC1D12O60347 775 aa15.08■□□□□ 0.01
VAMP7-201ENST00000262640 SKOR2Q2VWA4 1001 aaPredicted RBP15.08■□□□□ 0.01
VAMP7-201ENST00000262640 SRBD1Q8N5C6 995 aaKnown RBP15.08■□□□□ 0.01
VAMP7-201ENST00000262640 AIFM3Q96NN9 605 aa15.08■□□□□ 0.01
VAMP7-201ENST00000262640 KANSL2Q9H9L4 492 aa15.08■□□□□ 0.01
VAMP7-201ENST00000262640 LMBRD1Q9NUN5 540 aa15.08■□□□□ 0.01
VAMP7-201ENST00000262640 MAD2L2Q9UI95 211 aa15.08■□□□□ 0.01
VAMP7-201ENST00000262640 DNM1Q05193 864 aaKnown RBP15.08■□□□□ 0
VAMP7-201ENST00000262640 CSPP1Q1MSJ5 1256 aa15.08■□□□□ 0
VAMP7-201ENST00000262640 ABCB5Q2M3G0 1257 aa15.08■□□□□ 0
VAMP7-201ENST00000262640 OTUD7BQ6GQQ9 843 aa15.08■□□□□ 0
VAMP7-201ENST00000262640 TMEM87AQ8NBN3 555 aa15.08■□□□□ 0
VAMP7-201ENST00000262640 CLIP2Q9UDT6 1046 aa15.08■□□□□ 0
VAMP7-201ENST00000262640 PGAP2Q9UHJ9 254 aa15.08■□□□□ 0
VAMP7-201ENST00000262640 PALM3A6NDB9 673 aaPredicted RBP15.07■□□□□ 0
VAMP7-201ENST00000262640 PARP1P09874 1014 aaKnown RBP15.07■□□□□ 0
VAMP7-201ENST00000262640 GUCY1A2P33402 732 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms