RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 CSRNP2Q9H175 543 aa11.48□□□□□ -0.57
LIG3-201ENST00000262327 CYP2D7A0A087X1C5 515 aa11.48□□□□□ -0.57
LIG3-201ENST00000262327 SOWAHDA6NJG2 315 aa11.48□□□□□ -0.57
LIG3-201ENST00000262327 PATL2C9JE40 543 aaKnown RBP11.48□□□□□ -0.57
LIG3-201ENST00000262327 MMP1P03956 469 aa11.48□□□□□ -0.57
LIG3-201ENST00000262327 EARS2Q5JPH6 523 aaKnown RBP11.48□□□□□ -0.57
LIG3-201ENST00000262327 TMCO3Q6UWJ1 677 aa11.48□□□□□ -0.57
LIG3-201ENST00000262327 TC2NQ8N9U0 490 aa11.48□□□□□ -0.57
LIG3-201ENST00000262327 NOL10Q9BSC4 688 aaKnown RBP11.48□□□□□ -0.57
LIG3-201ENST00000262327 VPS54Q9P1Q0 977 aa11.48□□□□□ -0.57
LIG3-201ENST00000262327 FBXO2Q9UK22 296 aaPredicted RBP11.48□□□□□ -0.57
LIG3-201ENST00000262327 RTCBQ9Y3I0 505 aaKnown RBP11.48□□□□□ -0.57
LIG3-201ENST00000262327 BAZ2BQ9UIF8 2168 aaKnown RBP11.47□□□□□ -0.57
LIG3-201ENST00000262327 C4BP0C0L5 1744 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 WNT7AO00755 349 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 TADA3O75528 432 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 FMNL1O95466 1100 aaPredicted RBP11.47□□□□□ -0.57
LIG3-201ENST00000262327 CASQ1P31415 396 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 WTAPQ15007 396 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 AKNAD1Q5T1N1 836 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 TRIM34Q9BYJ4 488 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 NARFQ9UHQ1 456 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 A0A087X0B3 334 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 ADRA2BP18089 450 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 GYS2P54840 703 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 KCNQ4P56696 695 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 MRPL44Q9H9J2 332 aaKnown RBP11.47□□□□□ -0.57
LIG3-201ENST00000262327 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
LIG3-201ENST00000262327 ABCF2Q9UG63 623 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 PHLPP2Q6ZVD8 1323 aa11.47□□□□□ -0.57
LIG3-201ENST00000262327 PLSCR1O15162 318 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 GNPATO15228 680 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 ARHGAP6O43182 974 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 CAPN2P17655 700 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 SLC4A8Q2Y0W8 1093 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 SGMS1Q86VZ5 419 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 TRIM22Q8IYM9 498 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 SHISA4Q96DD7 197 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 FAM53CQ9NYF3 392 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 FBXO3Q9UK99 471 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 SCN7AQ01118 1682 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 WDR19Q8NEZ3 1342 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 ZSCAN12O43309 604 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 PTPREP23469 700 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 MAP3K12Q12852 859 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 SPECC1LQ69YQ0 1117 aa11.46□□□□□ -0.57
LIG3-201ENST00000262327 SASH3O75995 380 aa11.46□□□□□ -0.58
LIG3-201ENST00000262327 IFNAR1P17181 557 aa11.46□□□□□ -0.58
LIG3-201ENST00000262327 EVX2Q03828 476 aa11.46□□□□□ -0.58
LIG3-201ENST00000262327 PUM3Q15397 648 aaKnown RBP11.46□□□□□ -0.58
LIG3-201ENST00000262327 POTEAQ6S8J7 498 aa11.46□□□□□ -0.58
LIG3-201ENST00000262327 TICAM2Q86XR7 235 aa11.46□□□□□ -0.58
LIG3-201ENST00000262327 CCDC12Q8WUD4 166 aaPredicted RBP11.46□□□□□ -0.58
LIG3-201ENST00000262327 MPHOSPH8Q99549 860 aa11.46□□□□□ -0.58
LIG3-201ENST00000262327 LRP2BPQ9P2M1 347 aa11.46□□□□□ -0.58
LIG3-201ENST00000262327 PUF60Q9UHX1 559 aaKnown RBP11.46□□□□□ -0.58
LIG3-201ENST00000262327 C4AP0C0L4 1744 aa11.46□□□□□ -0.58
LIG3-201ENST00000262327 CD44P16070 742 aaKnown RBP11.45□□□□□ -0.58
LIG3-201ENST00000262327 PPP2R3AQ06190 1150 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 ADGRA1Q86SQ6 560 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 CRACR2BQ8N4Y2 399 aaPredicted RBP11.45□□□□□ -0.58
LIG3-201ENST00000262327 LPIN2Q92539 896 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 LRRC4BQ9NT99 713 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 AKAP11Q9UKA4 1901 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 ERICH2A1L162 156 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 PDE8AO60658 829 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 ARID4AP29374 1257 aaPredicted RBP11.45□□□□□ -0.58
LIG3-201ENST00000262327 LIFRP42702 1097 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 KCNJ6P48051 423 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 ZNF174Q15697 407 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 SUSD4Q5VX71 490 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 ZNF654Q8IZM8 581 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 RAI14Q9P0K7 980 aa11.45□□□□□ -0.58
LIG3-201ENST00000262327 NIP7Q9Y221 180 aaKnown RBP eCLIP11.45□□□□□ -0.58
LIG3-201ENST00000262327 FAM237AA0A1B0GTK4 181 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 CCP110O43303 1012 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 ZPR1O75312 459 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 ABL1P00519 1130 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 TBX2Q13207 712 aaPredicted RBP11.44□□□□□ -0.58
LIG3-201ENST00000262327 MORC3Q14149 939 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 FANCBQ8NB91 859 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 NEK11Q8NG66 645 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 BLZF1Q9H2G9 400 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 ARGLU1Q9NWB6 273 aaPredicted RBP11.44□□□□□ -0.58
LIG3-201ENST00000262327 CCDC66A2RUB6 948 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 ACTN4O43707 911 aaKnown RBP11.44□□□□□ -0.58
LIG3-201ENST00000262327 UQCRFS1P1P0C7P4 283 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 ZNF18P17022 549 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 CDC25AP30304 524 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 CCT6AP40227 531 aaKnown RBP11.44□□□□□ -0.58
LIG3-201ENST00000262327 RBL2Q08999 1139 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 TRAPPC3LQ5T215 181 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 MAPK8IP1Q9UQF2 711 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 ZRANB2O95218 330 aaKnown RBP eCLIP11.44□□□□□ -0.58
LIG3-201ENST00000262327 PLEKHA8P1O95397 391 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 SLC5A1P13866 664 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 ST5P78524 1137 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 RAD9BQ6WBX8 426 aa11.44□□□□□ -0.58
LIG3-201ENST00000262327 ARHGEF1Q92888 912 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms