RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 WRNIP1Q96S55 665 aa32.25■■■□□ 2.75
SMARCD3-201ENST00000262188 STX8Q9UNK0 236 aa32.25■■■□□ 2.75
SMARCD3-201ENST00000262188 RXRAP19793 462 aa32.25■■■□□ 2.75
SMARCD3-201ENST00000262188 STK3Q13188 491 aa32.25■■■□□ 2.75
SMARCD3-201ENST00000262188 DCAF15Q66K64 600 aa32.25■■■□□ 2.75
SMARCD3-201ENST00000262188 SNX21Q969T3 373 aa32.25■■■□□ 2.75
SMARCD3-201ENST00000262188 CCDC17Q96LX7 622 aa32.25■■■□□ 2.75
SMARCD3-201ENST00000262188 ZNF341Q9BYN7 854 aa32.25■■■□□ 2.75
SMARCD3-201ENST00000262188 ALDH8A1Q9H2A2 487 aaPredicted RBP32.25■■■□□ 2.75
SMARCD3-201ENST00000262188 IGKV6D-41A0A0C4DH26 115 aa32.24■■■□□ 2.75
SMARCD3-201ENST00000262188 ERICH2A1L162 156 aa32.24■■■□□ 2.75
SMARCD3-201ENST00000262188 USP2O75604 605 aaPredicted RBP32.24■■■□□ 2.75
SMARCD3-201ENST00000262188 CAP2P40123 477 aa32.24■■■□□ 2.75
SMARCD3-201ENST00000262188 SART3Q15020 963 aaKnown RBP32.24■■■□□ 2.75
SMARCD3-201ENST00000262188 NFXL1Q6ZNB6 911 aa32.24■■■□□ 2.75
SMARCD3-201ENST00000262188 ATP2B2Q01814 1243 aa32.23■■■□□ 2.75
SMARCD3-201ENST00000262188 ZBTB21Q9ULJ3 1066 aa32.23■■■□□ 2.75
SMARCD3-201ENST00000262188 GREB1LQ9C091 1923 aaPredicted RBP32.23■■■□□ 2.75
SMARCD3-201ENST00000262188 PLIN4Q96Q06 1357 aa32.23■■■□□ 2.75
SMARCD3-201ENST00000262188 KLF18A0A0U1RQI7 1052 aa32.23■■■□□ 2.75
SMARCD3-201ENST00000262188 ME3Q16798 604 aa32.23■■■□□ 2.75
SMARCD3-201ENST00000262188 IFIT1BQ5T764 474 aaKnown RBP32.23■■■□□ 2.75
SMARCD3-201ENST00000262188 HSCBQ8IWL3 235 aa32.23■■■□□ 2.75
SMARCD3-201ENST00000262188 KIF3CO14782 793 aa32.22■■■□□ 2.75
SMARCD3-201ENST00000262188 TCP11L1Q9NUJ3 509 aa32.22■■■□□ 2.75
SMARCD3-201ENST00000262188 MTMR4Q9NYA4 1195 aa32.22■■■□□ 2.75
SMARCD3-201ENST00000262188 MTMR7Q9Y216 660 aa32.22■■■□□ 2.75
SMARCD3-201ENST00000262188 RASGRP2Q7LDG7 609 aa32.21■■■□□ 2.75
SMARCD3-201ENST00000262188 NECAB1Q8N987 351 aa32.21■■■□□ 2.75
SMARCD3-201ENST00000262188 KLRG1Q96E93 195 aa32.21■■■□□ 2.75
SMARCD3-201ENST00000262188 LIMCH1Q9UPQ0 1083 aa32.21■■■□□ 2.75
SMARCD3-201ENST00000262188 CCDC144CPQ8IYA2 1237 aa32.21■■■□□ 2.75
SMARCD3-201ENST00000262188 TMX3Q96JJ7 454 aa32.21■■■□□ 2.75
SMARCD3-201ENST00000262188 YY1P25490 414 aa32.2■■■□□ 2.75
SMARCD3-201ENST00000262188 ANKRD1Q15327 319 aa32.2■■■□□ 2.75
SMARCD3-201ENST00000262188 TMEM179Q6ZVK1 233 aa32.2■■■□□ 2.75
SMARCD3-201ENST00000262188 SIAH1Q8IUQ4 282 aa32.2■■■□□ 2.75
SMARCD3-201ENST00000262188 SPRYD3Q8NCJ5 442 aa32.2■■■□□ 2.75
SMARCD3-201ENST00000262188 HOOK2Q96ED9 719 aa32.2■■■□□ 2.75
SMARCD3-201ENST00000262188 CABP5Q9NP86 173 aa32.2■■■□□ 2.75
SMARCD3-201ENST00000262188 CLIP2Q9UDT6 1046 aa32.2■■■□□ 2.75
SMARCD3-201ENST00000262188 ZNF112Q9UJU3 913 aa32.2■■■□□ 2.75
SMARCD3-201ENST00000262188 K7ELQ4 463 aaPredicted RBP32.19■■■□□ 2.74
SMARCD3-201ENST00000262188 LIFRP42702 1097 aa32.19■■■□□ 2.74
SMARCD3-201ENST00000262188 TTLL12Q14166 644 aaPredicted RBP32.19■■■□□ 2.74
SMARCD3-201ENST00000262188 CHADLQ6NUI6 762 aa32.19■■■□□ 2.74
SMARCD3-201ENST00000262188 LRRC47Q8N1G4 583 aaKnown RBP32.19■■■□□ 2.74
SMARCD3-201ENST00000262188 FBXL16Q8N461 479 aa32.19■■■□□ 2.74
SMARCD3-201ENST00000262188 TMEM47Q9BQJ4 181 aa32.19■■■□□ 2.74
SMARCD3-201ENST00000262188 ATAD5Q96QE3 1844 aa32.19■■■□□ 2.74
SMARCD3-201ENST00000262188 CCDC69A6NI79 296 aa32.19■■■□□ 2.74
SMARCD3-201ENST00000262188 TAOK2Q9UL54 1235 aa32.19■■■□□ 2.74
SMARCD3-201ENST00000262188 EEF2P13639 858 aaKnown RBP32.18■■■□□ 2.74
SMARCD3-201ENST00000262188 CCT2P78371 535 aaKnown RBP32.18■■■□□ 2.74
SMARCD3-201ENST00000262188 FOXD4L1Q9NU39 408 aa32.18■■■□□ 2.74
SMARCD3-201ENST00000262188 PDIA3P30101 505 aaKnown RBP32.18■■■□□ 2.74
SMARCD3-201ENST00000262188 ICA1Q05084 483 aa32.18■■■□□ 2.74
SMARCD3-201ENST00000262188 ST3GAL1Q11201 340 aa32.18■■■□□ 2.74
SMARCD3-201ENST00000262188 APOA5Q6Q788 366 aa32.18■■■□□ 2.74
SMARCD3-201ENST00000262188 SGMS1Q86VZ5 419 aa32.18■■■□□ 2.74
SMARCD3-201ENST00000262188 MICU3Q86XE3 530 aa32.18■■■□□ 2.74
SMARCD3-201ENST00000262188 NCOA5Q9HCD5 579 aaKnown RBP32.18■■■□□ 2.74
SMARCD3-201ENST00000262188 GOLGA8BA8MQT2 603 aa32.17■■■□□ 2.74
SMARCD3-201ENST00000262188 ITGBL1O95965 494 aaPredicted RBP32.17■■■□□ 2.74
SMARCD3-201ENST00000262188 NF2P35240 595 aa32.17■■■□□ 2.74
SMARCD3-201ENST00000262188 DGKHQ86XP1 1220 aa32.17■■■□□ 2.74
SMARCD3-201ENST00000262188 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.17■■■□□ 2.74
SMARCD3-201ENST00000262188 MTA3Q9BTC8 594 aa32.17■■■□□ 2.74
SMARCD3-201ENST00000262188 HPS5Q9UPZ3 1129 aa32.17■■■□□ 2.74
SMARCD3-201ENST00000262188 PPP1R12BO60237 982 aaPredicted RBP32.16■■■□□ 2.74
SMARCD3-201ENST00000262188 CTNND1O60716 968 aaKnown RBP32.16■■■□□ 2.74
SMARCD3-201ENST00000262188 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.16■■■□□ 2.74
SMARCD3-201ENST00000262188 ZNF654Q8IZM8 581 aa32.16■■■□□ 2.74
SMARCD3-201ENST00000262188 ACER1Q8TDN7 264 aa32.16■■■□□ 2.74
SMARCD3-201ENST00000262188 NUP133Q8WUM0 1156 aa32.16■■■□□ 2.74
SMARCD3-201ENST00000262188 KANSL2Q9H9L4 492 aa32.16■■■□□ 2.74
SMARCD3-201ENST00000262188 SLC12A7Q9Y666 1083 aa32.16■■■□□ 2.74
SMARCD3-201ENST00000262188 OTOFQ9HC10 1997 aa32.15■■■□□ 2.74
SMARCD3-201ENST00000262188 A0A1W2PRG0 241 aa32.15■■■□□ 2.74
SMARCD3-201ENST00000262188 TTLL1O95922 423 aa32.15■■■□□ 2.74
SMARCD3-201ENST00000262188 ECE1P42892 770 aa32.15■■■□□ 2.74
SMARCD3-201ENST00000262188 CLMNQ96JQ2 1002 aa32.15■■■□□ 2.74
SMARCD3-201ENST00000262188 KAT14Q9H8E8 782 aa32.15■■■□□ 2.74
SMARCD3-201ENST00000262188 PPFIA3O75145 1194 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 NOVP48745 357 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 MCM2P49736 904 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 NT5C2P49902 561 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 VGLL4Q14135 290 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 CCDC83Q8IWF9 413 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 PNMA1Q8ND90 353 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 UBE2Q2LH0YL09 131 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 ASNSP08243 561 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 EVCP57679 992 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 L1TD1Q5T7N2 865 aaKnown RBP32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 ANKS1AQ92625 1134 aa32.14■■■□□ 2.74
SMARCD3-201ENST00000262188 CELF2O95319 508 aaKnown RBP32.13■■■□□ 2.73
SMARCD3-201ENST00000262188 SCYL3Q8IZE3 742 aa32.13■■■□□ 2.73
SMARCD3-201ENST00000262188 ZNF784Q8NCA9 323 aaPredicted RBP32.13■■■□□ 2.73
SMARCD3-201ENST00000262188 DOCK1Q14185 1865 aa32.13■■■□□ 2.73
SMARCD3-201ENST00000262188 MYH4Q9Y623 1939 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms