RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 KIFAP3Q92845 792 aa11.89□□□□□ -0.51
SLC6A4-201ENST00000261707 YY1AP1Q9H869 796 aa11.89□□□□□ -0.51
SLC6A4-201ENST00000261707 ZBTB40Q9NUA8 1239 aa11.89□□□□□ -0.51
SLC6A4-201ENST00000261707 NIP7Q9Y221 180 aaKnown RBP eCLIP11.89□□□□□ -0.51
SLC6A4-201ENST00000261707 GNAQP50148 359 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 SRGAP1Q7Z6B7 1085 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 NOP9Q86U38 636 aaKnown RBP11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 TTC30AQ86WT1 665 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 ZBTB21Q9ULJ3 1066 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 NR1I2O75469 434 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 RASA3Q14644 834 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 P3H4Q92791 437 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 GNPATO15228 680 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 LCA5Q86VQ0 697 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 TEX11Q8IYF3 940 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 GINS2Q9Y248 185 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 CSADQ9Y600 493 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 RALGAPBQ86X10 1494 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 NOP56O00567 594 aaKnown RBP11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 CAPN15O75808 1086 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 UQCRFS1P1P0C7P4 283 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 KRT5P13647 590 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 RXRAP19793 462 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 GABPAQ06546 454 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 IFNL2Q8IZJ0 200 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 FBXO18Q8NFZ0 1043 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 SNX14Q9Y5W7 946 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 EVI5O60447 810 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 CDC25BP30305 580 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 POSTNQ15063 836 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 NAA16Q6N069 864 aaPredicted RBP11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 TYW1BQ6NUM6 668 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 LLPHQ9BRT6 129 aaKnown RBP11.88□□□□□ -0.51
SLC6A4-201ENST00000261707 CCDC92Q53HC0 331 aaPredicted RBP11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 ZCRB1Q8TBF4 217 aaKnown RBP11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 NSD2O96028 1365 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 BRD1O95696 1058 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 TADA2BQ86TJ2 420 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 CENPKQ9BS16 269 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 MRPL46Q9H2W6 279 aaKnown RBP11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 PLCD1P51178 756 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 CLCN6P51797 869 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 FCHSD1Q86WN1 690 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 STX8Q9UNK0 236 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 FRMD4BQ9Y2L6 1034 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 PDE6BP35913 854 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 RAD51AP2Q09MP3 1159 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 RILPL1Q5EBL4 403 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 NELFBQ8WX92 580 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 CTTNBP2NLQ9P2B4 639 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 DISP3Q9P2K9 1392 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 MAP3K7O43318 606 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 RXRBP28702 533 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 FAM133BQ5BKY9 247 aaKnown RBP11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 SFMBT2Q5VUG0 894 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 LDHAL6AQ6ZMR3 332 aa11.87□□□□□ -0.51
SLC6A4-201ENST00000261707 UBE3BQ7Z3V4 1068 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 GPIHBP1Q8IV16 184 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 TRMT44Q8IYL2 757 aaKnown RBP11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 SUPT20HQ8NEM7 779 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 YIPF3Q9GZM5 350 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 ZC4H2Q9NQZ6 224 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 SCINQ9Y6U3 715 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 IRAK4Q9NWZ3 460 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 NSFL1CQ9UNZ2 370 aaKnown RBP11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 SKIP12755 728 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 CCDC93Q567U6 631 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 RNF113AO15541 343 aaKnown RBP11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 FAM193BQ96PV7 902 aaPredicted RBP11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 SH3GL3Q99963 347 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 PHLPP2Q6ZVD8 1323 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 KRIT1O00522 736 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 APOEP02649 317 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 PNOCQ13519 176 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 PPP4R1Q8TF05 950 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 KLHL30Q0D2K2 578 aa11.86□□□□□ -0.51
SLC6A4-201ENST00000261707 SLC27A2O14975 620 aa11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 DYNC1I2Q13409 638 aaKnown RBP11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 ANKRD20A4Q4UJ75 823 aa11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 ANKRD20A8PQ5CZ79 823 aa11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 ANKRD20A2Q5SQ80 823 aa11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 AKNAD1Q5T1N1 836 aa11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 ANKRD20A1Q5TYW2 823 aa11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 PDZD8Q8NEN9 1154 aa11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 CACYBPQ9HB71 228 aaKnown RBP11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 CCNL1Q9UK58 526 aaPredicted RBP11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 EIF3CLB5ME19 914 aaKnown RBP11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 LIN9Q5TKA1 542 aa11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 EIF3CQ99613 913 aaKnown RBP11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 SH2D4AQ9H788 454 aa11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 CDC23Q9UJX2 597 aa11.85□□□□□ -0.51
SLC6A4-201ENST00000261707 KCNK3O14649 394 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms