RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PHIPQ8WWQ0 1821 aa19.91■□□□□ 0.78
SDCBP-201ENST00000260130 TAF1CQ15572 869 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-201ENST00000260130 ZNF444Q8N0Y2 327 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-201ENST00000260130 PROCA1Q8NCQ7 364 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-201ENST00000260130 DSCC1Q9BVC3 393 aa19.91■□□□□ 0.78
SDCBP-201ENST00000260130 R3HDMLQ9H3Y0 253 aa19.91■□□□□ 0.78
SDCBP-201ENST00000260130 PDHXO00330 501 aa19.9■□□□□ 0.78
SDCBP-201ENST00000260130 PRDM1O75626 825 aa19.9■□□□□ 0.78
SDCBP-201ENST00000260130 CTDSPL2Q05D32 466 aa19.9■□□□□ 0.78
SDCBP-201ENST00000260130 CRHR2Q13324 411 aa19.9■□□□□ 0.78
SDCBP-201ENST00000260130 PRDM10Q9NQV6 1147 aa19.9■□□□□ 0.78
SDCBP-201ENST00000260130 ZFYVE28Q9HCC9 887 aa19.9■□□□□ 0.78
SDCBP-201ENST00000260130 DAXXQ9UER7 740 aaPredicted RBP19.9■□□□□ 0.78
SDCBP-201ENST00000260130 SGSM2O43147 1006 aa19.89■□□□□ 0.77
SDCBP-201ENST00000260130 C8orf34Q49A92 452 aa19.89■□□□□ 0.77
SDCBP-201ENST00000260130 ACER1Q8TDN7 264 aa19.89■□□□□ 0.77
SDCBP-201ENST00000260130 TMOD4Q9NZQ9 345 aa19.89■□□□□ 0.77
SDCBP-201ENST00000260130 AGTPBP1Q9UPW5 1226 aa19.89■□□□□ 0.77
SDCBP-201ENST00000260130 DGKZQ13574 1117 aa19.88■□□□□ 0.77
SDCBP-201ENST00000260130 NOM1Q5C9Z4 860 aaKnown RBP19.88■□□□□ 0.77
SDCBP-201ENST00000260130 USP17L2Q6R6M4 530 aa19.88■□□□□ 0.77
SDCBP-201ENST00000260130 FEZ1Q99689 392 aa19.88■□□□□ 0.77
SDCBP-201ENST00000260130 KIAA1683Q9H0B3 1180 aa19.88■□□□□ 0.77
SDCBP-201ENST00000260130 KANSL2Q9H9L4 492 aa19.88■□□□□ 0.77
SDCBP-201ENST00000260130 SLC45A1Q9Y2W3 748 aa19.88■□□□□ 0.77
SDCBP-201ENST00000260130 GPR25O00155 361 aa19.87■□□□□ 0.77
SDCBP-201ENST00000260130 USP14P54578 494 aa19.87■□□□□ 0.77
SDCBP-201ENST00000260130 HAND2P61296 217 aa19.87■□□□□ 0.77
SDCBP-201ENST00000260130 ICA1Q05084 483 aa19.87■□□□□ 0.77
SDCBP-201ENST00000260130 TREML2Q5T2D2 321 aa19.87■□□□□ 0.77
SDCBP-201ENST00000260130 SIAH1Q8IUQ4 282 aa19.87■□□□□ 0.77
SDCBP-201ENST00000260130 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.87■□□□□ 0.77
SDCBP-201ENST00000260130 INCENPQ9NQS7 918 aa19.87■□□□□ 0.77
SDCBP-201ENST00000260130 CTNNA3Q9UI47 895 aa19.87■□□□□ 0.77
SDCBP-201ENST00000260130 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.87■□□□□ 0.77
SDCBP-201ENST00000260130 ZNF213O14771 459 aa19.87■□□□□ 0.77
SDCBP-201ENST00000260130 EMILIN3Q9NT22 766 aa19.87■□□□□ 0.77
SDCBP-201ENST00000260130 A0A1W2PRG0 241 aa19.86■□□□□ 0.77
SDCBP-201ENST00000260130 FGRP09769 529 aa19.86■□□□□ 0.77
SDCBP-201ENST00000260130 ZYXQ15942 572 aaKnown RBP19.86■□□□□ 0.77
SDCBP-201ENST00000260130 CLEC10AQ8IUN9 316 aa19.86■□□□□ 0.77
SDCBP-201ENST00000260130 ARHGEF10LQ9HCE6 1279 aa19.86■□□□□ 0.77
SDCBP-201ENST00000260130 TACC3Q9Y6A5 838 aa19.86■□□□□ 0.77
SDCBP-201ENST00000260130 TLR2O60603 784 aa19.85■□□□□ 0.77
SDCBP-201ENST00000260130 PABPC4Q13310 644 aaKnown RBP eCLIP19.85■□□□□ 0.775e-7■■■□□ 16
SDCBP-201ENST00000260130 PARK7Q99497 189 aaKnown RBP19.85■□□□□ 0.77
SDCBP-201ENST00000260130 TSPY3P0CV98 308 aa19.85■□□□□ 0.77
SDCBP-201ENST00000260130 TSPY8P0CW00 308 aa19.85■□□□□ 0.77
SDCBP-201ENST00000260130 TFAP4Q01664 338 aa19.85■□□□□ 0.77
SDCBP-201ENST00000260130 NEDD1Q8NHV4 660 aa19.85■□□□□ 0.77
SDCBP-201ENST00000260130 ZNF296Q8WUU4 475 aaPredicted RBP19.85■□□□□ 0.77
SDCBP-201ENST00000260130 C12orf42Q96LP6 360 aa19.85■□□□□ 0.77
SDCBP-201ENST00000260130 ESYT1Q9BSJ8 1104 aa19.85■□□□□ 0.77
SDCBP-201ENST00000260130 TMX2Q9Y320 296 aa19.85■□□□□ 0.77
SDCBP-201ENST00000260130 ORC4O43929 436 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 CYP2C8P10632 490 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 EEF2P13639 858 aaKnown RBP19.84■□□□□ 0.77
SDCBP-201ENST00000260130 PTH1RQ03431 593 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 IMMTQ16891 758 aaKnown RBP19.84■□□□□ 0.77
SDCBP-201ENST00000260130 FAM47AQ5JRC9 791 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 NBPF3Q9H094 633 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 SH2D4AQ9H788 454 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 PTPRFP10586 1907 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 MYH8P13535 1937 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 CDC45O75419 566 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 PCP11498 1178 aaKnown RBP19.84■□□□□ 0.77
SDCBP-201ENST00000260130 ATP2B2Q01814 1243 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 AKNAD1Q5T1N1 836 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 MFSD6Q6ZSS7 791 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 TOMM22Q9NS69 142 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 PNMA3Q9UL41 463 aa19.84■□□□□ 0.77
SDCBP-201ENST00000260130 IGKV6D-41A0A0C4DH26 115 aa19.83■□□□□ 0.77
SDCBP-201ENST00000260130 RANBP6O60518 1105 aaKnown RBP19.83■□□□□ 0.77
SDCBP-201ENST00000260130 FKTNO75072 461 aa19.83■□□□□ 0.77
SDCBP-201ENST00000260130 HOXA7P31268 230 aaPredicted RBP19.83■□□□□ 0.77
SDCBP-201ENST00000260130 CASC1Q6TDU7 716 aa19.83■□□□□ 0.77
SDCBP-201ENST00000260130 TBC1D10CQ8IV04 446 aa19.83■□□□□ 0.77
SDCBP-201ENST00000260130 STAG1Q8WVM7 1258 aa19.83■□□□□ 0.77
SDCBP-201ENST00000260130 RNF41Q9H4P4 317 aaPredicted RBP19.83■□□□□ 0.77
SDCBP-201ENST00000260130 NYAP2Q9P242 653 aa19.83■□□□□ 0.77
SDCBP-201ENST00000260130 TSPY2A6NKD2 308 aa19.83■□□□□ 0.76
SDCBP-201ENST00000260130 OSBPP22059 807 aa19.83■□□□□ 0.76
SDCBP-201ENST00000260130 KIAA1211Q6ZU35 1233 aa19.83■□□□□ 0.76
SDCBP-201ENST00000260130 RRP12Q5JTH9 1297 aaKnown RBP19.82■□□□□ 0.76
SDCBP-201ENST00000260130 COL13A1Q5TAT6 717 aaPredicted RBP19.82■□□□□ 0.76
SDCBP-201ENST00000260130 CEP95Q96GE4 821 aa19.82■□□□□ 0.76
SDCBP-201ENST00000260130 MTMR4Q9NYA4 1195 aa19.82■□□□□ 0.76
SDCBP-201ENST00000260130 U3KPZ7 1027 aaPredicted RBP19.82■□□□□ 0.76
SDCBP-201ENST00000260130 PLIN4Q96Q06 1357 aa19.82■□□□□ 0.76
SDCBP-201ENST00000260130 SP3Q02447 781 aa19.81■□□□□ 0.76
SDCBP-201ENST00000260130 C17orf99Q6UX52 265 aa19.81■□□□□ 0.76
SDCBP-201ENST00000260130 MAP4K1Q92918 833 aa19.81■□□□□ 0.76
SDCBP-201ENST00000260130 ASCC2Q9H1I8 757 aaPredicted RBP19.81■□□□□ 0.76
SDCBP-201ENST00000260130 LOC285556D6RIA3 1793 aa19.81■□□□□ 0.76
SDCBP-201ENST00000260130 VCAM1P19320 739 aa19.81■□□□□ 0.76
SDCBP-201ENST00000260130 SMCR8Q8TEV9 937 aaPredicted RBP19.81■□□□□ 0.76
SDCBP-201ENST00000260130 CLIP2Q9UDT6 1046 aa19.81■□□□□ 0.76
SDCBP-201ENST00000260130 CPA4Q9UI42 421 aa19.81■□□□□ 0.76
SDCBP-201ENST00000260130 ADGRA2Q96PE1 1338 aa19.81■□□□□ 0.76
SDCBP-201ENST00000260130 IRX3P78415 501 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms