RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 XBP1P17861 261 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 CACNB1Q02641 598 aaPredicted RBP10.42□□□□□ -0.74
CKAP2-201ENST00000258607 KARSQ15046 597 aaKnown RBP10.42□□□□□ -0.74
CKAP2-201ENST00000258607 AOC3Q16853 763 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 PRAMEF18Q5VWM3 479 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 CLEC4GQ6UXB4 293 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 BARGINQ6ZT62 677 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 KCNF1Q9H3M0 494 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 ANO10Q9NW15 660 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 GOLGA6L6A8MZA4 724 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 IDEP14735 1019 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 TTBK2Q6IQ55 1244 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 PROM2Q8N271 834 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 KCNG4Q8TDN1 519 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 DPF2Q92785 391 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 PCMTD1Q96MG8 357 aaPredicted RBP10.41□□□□□ -0.74
CKAP2-201ENST00000258607 HINFPQ9BQA5 517 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 TMEM260Q9NX78 707 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 TBC1D7Q9P0N9 293 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 BRCA2P51587 3418 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 SLIT2O94813 1529 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 TRIM75PA6NK02 468 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 LETM1O95202 739 aaPredicted RBP10.41□□□□□ -0.74
CKAP2-201ENST00000258607 SKILP12757 684 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 ADKP55263 362 aaKnown RBP10.41□□□□□ -0.74
CKAP2-201ENST00000258607 UBE2SQ16763 222 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 KCTD19Q17RG1 926 aaPredicted RBP10.41□□□□□ -0.74
CKAP2-201ENST00000258607 KIAA1468Q9P260 1216 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 NOL7Q9UMY1 257 aaKnown RBP10.41□□□□□ -0.74
CKAP2-201ENST00000258607 PARP3Q9Y6F1 533 aa10.41□□□□□ -0.74
CKAP2-201ENST00000258607 BAZ2AQ9UIF9 1905 aaKnown RBP10.41□□□□□ -0.74
CKAP2-201ENST00000258607 SPDYE4A6NLX3 237 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 TOB1P50616 345 aaPredicted RBP10.4□□□□□ -0.74
CKAP2-201ENST00000258607 SF3B3Q15393 1217 aaKnown RBP10.4□□□□□ -0.74
CKAP2-201ENST00000258607 EZH2Q15910 746 aaKnown RBP10.4□□□□□ -0.74
CKAP2-201ENST00000258607 NTRK3Q16288 839 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 ANKRD2Q9GZV1 360 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 COL1A1P02452 1464 aaPredicted RBP10.4□□□□□ -0.74
CKAP2-201ENST00000258607 KLRF2D3W0D1 207 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 TXKP42681 527 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 ZNF75DP51815 510 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 ADALQ6DHV7 355 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 KRI1Q8N9T8 703 aaKnown RBP10.4□□□□□ -0.74
CKAP2-201ENST00000258607 SYMPKQ92797 1274 aaKnown RBP10.4□□□□□ -0.74
CKAP2-201ENST00000258607 CEP95Q96GE4 821 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 DESI2Q9BSY9 194 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 TDRD3Q9H7E2 651 aaKnown RBP10.4□□□□□ -0.74
CKAP2-201ENST00000258607 BRMS1Q9HCU9 246 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 RNF216Q9NWF9 866 aaPredicted RBP10.4□□□□□ -0.74
CKAP2-201ENST00000258607 BCL9LQ86UU0 1499 aa10.4□□□□□ -0.74
CKAP2-201ENST00000258607 CCDC196A0A1B0GTZ2 297 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L5A8MUK1 530 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 PPEF1O14829 653 aaPredicted RBP10.4□□□□□ -0.75
CKAP2-201ENST00000258607 DEXIO95424 95 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 DNA2P51530 1060 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 HSP90AA2PQ14568 343 aaPredicted RBP10.4□□□□□ -0.75
CKAP2-201ENST00000258607 DYMQ7RTS9 669 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 C2CD5Q86YS7 1000 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 JMYQ8N9B5 988 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 TBC1D16Q8TBP0 767 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 PIGSQ96S52 555 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.4□□□□□ -0.75
CKAP2-201ENST00000258607 SAMSN1Q9NSI8 373 aaKnown RBP10.4□□□□□ -0.75
CKAP2-201ENST00000258607 FBXO3Q9UK99 471 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 TOGARAM1Q9Y4F4 1720 aa10.4□□□□□ -0.75
CKAP2-201ENST00000258607 XDHP47989 1333 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 MMP1P03956 469 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 GNAT2P19087 354 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 KRT2P35908 639 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 TYW1BQ6NUM6 668 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 FMR1NBQ8N0W7 255 aaPredicted RBP10.39□□□□□ -0.75
CKAP2-201ENST00000258607 SHISA4Q96DD7 197 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 CCNT1O60563 726 aaKnown RBP10.39□□□□□ -0.75
CKAP2-201ENST00000258607 CLSTN1O94985 981 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 TM4SF1P30408 202 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 UBASH3AP57075 661 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 FCHSD1Q86WN1 690 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 RBM17Q96I25 401 aaKnown RBP10.39□□□□□ -0.75
CKAP2-201ENST00000258607 KANSL2Q9H9L4 492 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 MYH2Q9UKX2 1941 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 LAMA3Q16787 3333 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 EPB41L2O43491 1005 aaKnown RBP10.39□□□□□ -0.75
CKAP2-201ENST00000258607 SLC39A14Q15043 492 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 CCDC178Q5BJE1 867 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 FBXO33Q7Z6M2 555 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 FOXP4Q8IVH2 680 aaPredicted RBP10.39□□□□□ -0.75
CKAP2-201ENST00000258607 STAG1Q8WVM7 1258 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 VPS16Q9H269 839 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 RTEL1Q9NZ71 1219 aa10.39□□□□□ -0.75
CKAP2-201ENST00000258607 FMNL1O95466 1100 aaPredicted RBP10.38□□□□□ -0.75
CKAP2-201ENST00000258607 TNNT1P13805 278 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 AKR1B1P15121 316 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 TTC38Q5R3I4 469 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.38□□□□□ -0.75
CKAP2-201ENST00000258607 TMEM87AQ8NBN3 555 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 ZNF277Q9NRM2 450 aaPredicted RBP10.38□□□□□ -0.75
CKAP2-201ENST00000258607 IL17RBQ9NRM6 502 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 HOMER2Q9NSB8 354 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 NFE2L3Q9Y4A8 694 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 DISP2A7MBM2 1401 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms