RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 CIAPIN1Q6FI81 312 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 SYT10Q6XYQ8 523 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 LMNTD2Q8IXW0 634 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 FNBP4Q8N3X1 1017 aaPredicted RBP12.15□□□□□ -0.46
URB2-201ENST00000258243 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
URB2-201ENST00000258243 LMBRD1Q9NUN5 540 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 RNF216Q9NWF9 866 aaPredicted RBP12.15□□□□□ -0.46
URB2-201ENST00000258243 ATP10DQ9P241 1426 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 CAPN2P17655 700 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 ICA1Q05084 483 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 FAM47CQ5HY64 1035 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 MICALL1Q8N3F8 863 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 USH1CQ9Y6N9 552 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 SPATA31A6Q5VVP1 1343 aa12.15□□□□□ -0.46
URB2-201ENST00000258243 HACE1Q8IYU2 909 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 GTF3C6Q969F1 213 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 DSCC1Q9BVC3 393 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 MLXIPQ9HAP2 919 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 SSX2IPQ9Y2D8 614 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 MRPL11Q9Y3B7 192 aaKnown RBP12.14□□□□□ -0.47
URB2-201ENST00000258243 ALAS1P13196 640 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 ABCB5Q2M3G0 1257 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 LRRC24Q50LG9 513 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 WDR44Q5JSH3 913 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 MCF2L2Q86YR7 1114 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 CIAO1O76071 339 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 RFX1P22670 979 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 SLC8A3P57103 927 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 NAA15Q9BXJ9 866 aaKnown RBP12.14□□□□□ -0.47
URB2-201ENST00000258243 FAM114A2Q9NRY5 505 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 TXKP42681 527 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 BIRC3Q13489 604 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 MKL2Q9ULH7 1088 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 PDE8BO95263 885 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 USP14P54578 494 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 HSP90AA4PQ58FG1 418 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 ANKRD35Q8N283 1001 aa12.14□□□□□ -0.47
URB2-201ENST00000258243 CTAGE15A4D2H0 777 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 CTAGE8P0CG41 777 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 ATL3Q6DD88 541 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 MCTP2Q6DN12 878 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 CTAGE6Q86UF2 777 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 CTAGE4Q8IX94 777 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 RAD17O75943 681 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 FLOT1O75955 427 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 GRAPQ13588 217 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 EHBP1Q8NDI1 1231 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 GRAPLQ8TC17 118 aaPredicted RBP12.13□□□□□ -0.47
URB2-201ENST00000258243 GLG1Q92896 1179 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 PPP1R9BQ96SB3 815 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
URB2-201ENST00000258243 EPB41P11171 864 aaKnown RBP12.13□□□□□ -0.47
URB2-201ENST00000258243 CYLC1P35663 651 aaPredicted RBP12.13□□□□□ -0.47
URB2-201ENST00000258243 PPP1R2P41236 205 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 OTUD7AQ8TE49 926 aaPredicted RBP12.13□□□□□ -0.47
URB2-201ENST00000258243 ERO1AQ96HE7 468 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 PDE6AP16499 860 aa12.13□□□□□ -0.47
URB2-201ENST00000258243 PRPF31Q8WWY3 499 aaKnown RBP12.13□□□□□ -0.47
URB2-201ENST00000258243 HSPA1LP34931 641 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 PRPHP41219 470 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 IREB2P48200 963 aaKnown RBP12.12□□□□□ -0.47
URB2-201ENST00000258243 GOLGA1Q92805 767 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 CSRNP1Q96S65 589 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 USP44Q9H0E7 712 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 ZBTB7AO95365 584 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 TRPC3Q13507 836 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 ADRA2BP18089 450 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 GABPB1Q06547 395 aaPredicted RBP12.12□□□□□ -0.47
URB2-201ENST00000258243 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 TSC1Q92574 1164 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 MKRN1Q9UHC7 482 aaKnown RBP12.12□□□□□ -0.47
URB2-201ENST00000258243 ZNF500O60304 480 aaPredicted RBP12.12□□□□□ -0.47
URB2-201ENST00000258243 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 CLNS1AP54105 237 aaKnown RBP12.12□□□□□ -0.47
URB2-201ENST00000258243 PDE4DQ08499 809 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 PROSER3Q2NL68 480 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 TTC38Q5R3I4 469 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 CLEC4GQ6UXB4 293 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 CEP128Q6ZU80 1094 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 NLRP10Q86W26 655 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 CEP112Q8N8E3 955 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 NEK11Q8NG66 645 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 ZSCAN10Q96SZ4 725 aaPredicted RBP12.12□□□□□ -0.47
URB2-201ENST00000258243 ATP8A2Q9NTI2 1148 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 RIMBP3CA6NJZ7 1639 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 RIMBP3BA6NNM3 1639 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 RIMBP3Q9UFD9 1639 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 SGSM2O43147 1006 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 CALUO43852 315 aaPredicted RBP12.12□□□□□ -0.47
URB2-201ENST00000258243 PDE1CQ14123 709 aaPredicted RBP12.12□□□□□ -0.47
URB2-201ENST00000258243 KCTD2Q14681 263 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 OTUD6AQ7L8S5 288 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 DPP9Q86TI2 863 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 GAS2L3Q86XJ1 694 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 TSNARE1Q96NA8 513 aa12.12□□□□□ -0.47
URB2-201ENST00000258243 NBPF3Q9H094 633 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms