RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 FAM198AQ9UFP1 575 aa21.94■■□□□ 1.1
TRIM47-201ENST00000254816 ZNRF3Q9ULT6 936 aa21.94■■□□□ 1.1
TRIM47-201ENST00000254816 hCG_1642624A0A1W2PR95 340 aa21.93■■□□□ 1.1
TRIM47-201ENST00000254816 KIF28PB7ZC32 967 aa21.93■■□□□ 1.1
TRIM47-201ENST00000254816 TRIM22Q8IYM9 498 aa21.93■■□□□ 1.1
TRIM47-201ENST00000254816 NLGN2Q8NFZ4 835 aa21.93■■□□□ 1.1
TRIM47-201ENST00000254816 MTMR7Q9Y216 660 aa21.93■■□□□ 1.1
TRIM47-201ENST00000254816 NFKBIEO00221 500 aa21.92■■□□□ 1.1
TRIM47-201ENST00000254816 MBD3O95983 291 aa21.92■■□□□ 1.1
TRIM47-201ENST00000254816 PNMA1Q8ND90 353 aa21.92■■□□□ 1.1
TRIM47-201ENST00000254816 NEDD1Q8NHV4 660 aa21.92■■□□□ 1.1
TRIM47-201ENST00000254816 CTCFLQ8NI51 663 aaPredicted RBP21.92■■□□□ 1.1
TRIM47-201ENST00000254816 SPATA32Q96LK8 384 aa21.92■■□□□ 1.1
TRIM47-201ENST00000254816 VPS33BQ9H267 617 aa21.92■■□□□ 1.1
TRIM47-201ENST00000254816 RBM28Q9NW13 759 aaKnown RBP21.92■■□□□ 1.1
TRIM47-201ENST00000254816 SERPINB13Q9UIV8 391 aa21.92■■□□□ 1.1
TRIM47-201ENST00000254816 UTRNP46939 3433 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 DDTLA6NHG4 134 aaPredicted RBP21.91■■□□□ 1.1
TRIM47-201ENST00000254816 NT5C2P49902 561 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 FUT2Q10981 343 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 PPP2R5BQ15173 497 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 CSPP1Q1MSJ5 1256 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 ANKS1AQ92625 1134 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 GMLQ99445 158 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 TMEM47Q9BQJ4 181 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 SYCE3A1L190 88 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 UBE2HP62256 183 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 KIF23Q02241 960 aaPredicted RBP21.91■■□□□ 1.1
TRIM47-201ENST00000254816 LEO1Q8WVC0 666 aaPredicted RBP21.91■■□□□ 1.1
TRIM47-201ENST00000254816 IDI2Q9BXS1 227 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 RBSNQ9H1K0 784 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 MYO3BQ8WXR4 1341 aa21.91■■□□□ 1.1
TRIM47-201ENST00000254816 DEXIO95424 95 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 HLA-DOAP06340 250 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 AKR1B1P15121 316 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 CXCL9Q07325 125 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 TMTC3Q6ZXV5 915 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 SH3BP5LQ7L8J4 393 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 SRBD1Q8N5C6 995 aaKnown RBP21.9■■□□□ 1.1
TRIM47-201ENST00000254816 CEP95Q96GE4 821 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 SCAND2PQ9GZW5 306 aaPredicted RBP21.9■■□□□ 1.1
TRIM47-201ENST00000254816 FAM196BA6NMK8 535 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 TRIM29Q14134 588 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 CCDC178Q5BJE1 867 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 USP28Q96RU2 1077 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.9■■□□□ 1.1
TRIM47-201ENST00000254816 KCNJ14Q9UNX9 436 aa21.9■■□□□ 1.1
TRIM47-201ENST00000254816 SHMT1P34896 483 aa21.89■■□□□ 1.09
TRIM47-201ENST00000254816 RASSF7Q02833 373 aa21.89■■□□□ 1.09
TRIM47-201ENST00000254816 RASGRP2Q7LDG7 609 aa21.89■■□□□ 1.09
TRIM47-201ENST00000254816 ZSCAN29Q8IWY8 852 aaPredicted RBP21.89■■□□□ 1.09
TRIM47-201ENST00000254816 WASF1Q92558 559 aa21.89■■□□□ 1.09
TRIM47-201ENST00000254816 RNF26Q9BY78 433 aaPredicted RBP21.89■■□□□ 1.09
TRIM47-201ENST00000254816 V9GY48 417 aaPredicted RBP21.89■■□□□ 1.09
TRIM47-201ENST00000254816 STAG2Q8N3U4 1231 aa21.89■■□□□ 1.09
TRIM47-201ENST00000254816 ARFGEF1Q9Y6D6 1849 aa21.88■■□□□ 1.09
TRIM47-201ENST00000254816 AKAP17AQ02040 695 aaKnown RBP21.88■■□□□ 1.09
TRIM47-201ENST00000254816 PKN1Q16512 942 aa21.88■■□□□ 1.09
TRIM47-201ENST00000254816 CLEC10AQ8IUN9 316 aa21.88■■□□□ 1.09
TRIM47-201ENST00000254816 PIBF1Q8WXW3 757 aa21.88■■□□□ 1.09
TRIM47-201ENST00000254816 CFAP45Q9UL16 551 aa21.88■■□□□ 1.09
TRIM47-201ENST00000254816 CNTNAP5Q8WYK1 1306 aa21.88■■□□□ 1.09
TRIM47-201ENST00000254816 CLRN2A0PK11 232 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 JDP2Q8WYK2 163 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 TRIM44Q96DX7 344 aaPredicted RBP21.87■■□□□ 1.09
TRIM47-201ENST00000254816 DNAJC18Q9H819 358 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 SWAP70Q9UH65 585 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 HDAC9Q9UKV0 1011 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 ELP1O95163 1332 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 MYH4Q9Y623 1939 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 SPDYE2BA6NHP3 402 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 PRPF3O43395 683 aaKnown RBP21.87■■□□□ 1.09
TRIM47-201ENST00000254816 SPDYE6P0CI01 402 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 EIF6P56537 245 aaKnown RBP21.87■■□□□ 1.09
TRIM47-201ENST00000254816 OGFOD1Q8N543 542 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 SHISA4Q96DD7 197 aa21.87■■□□□ 1.09
TRIM47-201ENST00000254816 ZNF396Q96N95 335 aaPredicted RBP21.86■■□□□ 1.09
TRIM47-201ENST00000254816 PRELPP51888 382 aa21.86■■□□□ 1.09
TRIM47-201ENST00000254816 GNL2Q13823 731 aaKnown RBP21.86■■□□□ 1.09
TRIM47-201ENST00000254816 GRM4Q14833 912 aa21.86■■□□□ 1.09
TRIM47-201ENST00000254816 DLGAP5Q15398 846 aa21.86■■□□□ 1.09
TRIM47-201ENST00000254816 MYSM1Q5VVJ2 828 aa21.86■■□□□ 1.09
TRIM47-201ENST00000254816 CIAPIN1Q6FI81 312 aa21.86■■□□□ 1.09
TRIM47-201ENST00000254816 DHX36Q9H2U1 1008 aaKnown RBP21.86■■□□□ 1.09
TRIM47-201ENST00000254816 MAD2L2Q9UI95 211 aa21.86■■□□□ 1.09
TRIM47-201ENST00000254816 GREB1LQ9C091 1923 aaPredicted RBP21.86■■□□□ 1.09
TRIM47-201ENST00000254816 SHTN1A0MZ66 631 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 TCP10L2B9ZVM9 353 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 KIF5BP33176 963 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 CCDC173Q0VFZ6 552 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 LRSAM1Q6UWE0 723 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 BRAPQ7Z569 592 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 PGBD1Q96JS3 809 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 EHD4Q9H223 541 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 VPS54Q9P1Q0 977 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 PLIN4Q96Q06 1357 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 MPHOSPH10O00566 681 aaKnown RBP21.85■■□□□ 1.09
TRIM47-201ENST00000254816 MMP1P03956 469 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 GOLGA8HP0CJ92 632 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 SHROOM1Q2M3G4 852 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms