RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 FOSP01100 380 aaPredicted RBP16.85■□□□□ 0.29
UBE4B-201ENST00000253251 LIFRP42702 1097 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 UBXN1Q04323 297 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 ICA1Q05084 483 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 NKX1-1Q15270 411 aaPredicted RBP16.85■□□□□ 0.29
UBE4B-201ENST00000253251 ZNF589Q86UQ0 364 aaPredicted RBP16.85■□□□□ 0.29
UBE4B-201ENST00000253251 SNX29Q8TEQ0 813 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 BRIP1Q9BX63 1249 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 SPATA31A1Q5TZJ5 1347 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 DPY19L2Q6NUT2 758 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 APOA5Q6Q788 366 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 OSBP2Q969R2 916 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 TACC1O75410 805 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 RASGRF1Q13972 1273 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 NECTIN1Q15223 517 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 TCHPQ9BT92 498 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 ANTXR1Q9H6X2 564 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 DNM3Q9UQ16 869 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 KRT86O43790 486 aa16.85■□□□□ 0.29
UBE4B-201ENST00000253251 ADD1P35611 737 aaKnown RBP16.85■□□□□ 0.29
UBE4B-201ENST00000253251 POSTNQ15063 836 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 BRDTQ58F21 947 aaPredicted RBP16.84■□□□□ 0.29
UBE4B-201ENST00000253251 FAM173BQ6P4H8 233 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 IQCDQ96DY2 449 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 CCDC42Q96M95 316 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 FRMD4BQ9Y2L6 1034 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 CSADQ9Y600 493 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 TMCO5BA8MYB1 307 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 EPB41P11171 864 aaKnown RBP16.84■□□□□ 0.29
UBE4B-201ENST00000253251 VWA3BQ502W6 1294 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 ARHGEF35A5YM69 484 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 CMA1P23946 247 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 NOLC1Q14978 699 aaKnown RBP eCLIP16.84■□□□□ 0.29
UBE4B-201ENST00000253251 CABP7Q86V35 215 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 MCF2L2Q86YR7 1114 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 FOXP1Q9H334 677 aaPredicted RBP16.84■□□□□ 0.29
UBE4B-201ENST00000253251 MROH2AA6NES4 1674 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 WDR19Q8NEZ3 1342 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 CALUO43852 315 aaPredicted RBP16.84■□□□□ 0.29
UBE4B-201ENST00000253251 STX17P56962 302 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 PABPC4Q13310 644 aaKnown RBP eCLIP16.84■□□□□ 0.29
UBE4B-201ENST00000253251 IVNS1ABPQ9Y6Y0 642 aa16.84■□□□□ 0.29
UBE4B-201ENST00000253251 CCDC66A2RUB6 948 aa16.83■□□□□ 0.29
UBE4B-201ENST00000253251 NBPF26B4DH59 902 aa16.83■□□□□ 0.29
UBE4B-201ENST00000253251 LAD1O00515 517 aa16.83■□□□□ 0.29
UBE4B-201ENST00000253251 ABCB5Q2M3G0 1257 aa16.83■□□□□ 0.29
UBE4B-201ENST00000253251 ADCK5Q3MIX3 580 aa16.83■□□□□ 0.29
UBE4B-201ENST00000253251 NBPF10Q6P3W6 841 aaKnown RBP16.83■□□□□ 0.29
UBE4B-201ENST00000253251 NBPF15Q8N660 670 aa16.83■□□□□ 0.29
UBE4B-201ENST00000253251 KIF4AO95239 1232 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 SCNN1DP51172 638 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 SCRN1Q12765 414 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 KIF5AQ12840 1032 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 PAK1Q13153 545 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 TRIML1Q8N9V2 468 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 A0A1W2PQ27 194 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 A0A1W2PQ64 194 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 A0A1W2PQD8 194 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 CETN3O15182 167 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 FMNL1O95466 1100 aaPredicted RBP16.83■□□□□ 0.28
UBE4B-201ENST00000253251 NLRX1Q86UT6 975 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 NUP58Q9BVL2 599 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 FER1L4A9Z1Z3 1794 aa16.83■□□□□ 0.28
UBE4B-201ENST00000253251 NEFHP12036 1026 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 SLFN13Q68D06 897 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 IFT74Q96LB3 600 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 KANSL2Q9H9L4 492 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 MAGEF1Q9HAY2 307 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 ARHGAP23Q9P227 1491 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 TRAF5O00463 557 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 SLFN12Q8IYM2 578 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 PSTPIP2Q9H939 334 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 IMPACTQ9P2X3 320 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 SERPINB13Q9UIV8 391 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 MMP10P09238 476 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 GBP2P32456 591 aaPredicted RBP16.82■□□□□ 0.28
UBE4B-201ENST00000253251 FAM182BQ5T319 152 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 NEK8Q86SG6 692 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 PIH1D3Q9NQM4 214 aaKnown RBP16.82■□□□□ 0.28
UBE4B-201ENST00000253251 MROH1Q8NDA8 1641 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 FBXO11Q86XK2 927 aa16.82■□□□□ 0.28
UBE4B-201ENST00000253251 PUS7LQ9H0K6 701 aaKnown RBP16.82■□□□□ 0.28
UBE4B-201ENST00000253251 SYNRGQ9UMZ2 1314 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 GOLGA6L10A0A0M3HER8 536 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 TTLL1O95922 423 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 LCORLQ8N3X6 602 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 DDX12PQ92771 950 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 FERMT1Q9BQL6 677 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 SELENOOQ9BVL4 669 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 RTEL1Q9NZ71 1219 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 MYO3BQ8WXR4 1341 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 SH2B2O14492 632 aaPredicted RBP16.81■□□□□ 0.28
UBE4B-201ENST00000253251 IFNAR1P17181 557 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 IRX3P78415 501 aaPredicted RBP16.81■□□□□ 0.28
UBE4B-201ENST00000253251 MSANTD4Q8NCY6 345 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 STRBPQ96SI9 672 aaKnown RBP16.81■□□□□ 0.28
UBE4B-201ENST00000253251 MINPP1Q9UNW1 487 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 RICTORQ6R327 1708 aa16.81■□□□□ 0.28
UBE4B-201ENST00000253251 AKR1B15C9JRZ8 316 aaPredicted RBP16.81■□□□□ 0.28
UBE4B-201ENST00000253251 CFBP00751 764 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms