RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 USP14P54578 494 aa29.96■■■□□ 2.39
LSM7-201ENST00000252622 OTOP1Q7RTM1 612 aa29.96■■■□□ 2.39
LSM7-201ENST00000252622 FEZ1Q99689 392 aa29.96■■■□□ 2.39
LSM7-201ENST00000252622 KIAA1683Q9H0B3 1180 aa29.96■■■□□ 2.39
LSM7-201ENST00000252622 ARHGEF6Q15052 776 aa29.95■■■□□ 2.39
LSM7-201ENST00000252622 TTC22Q5TAA0 569 aa29.95■■■□□ 2.39
LSM7-201ENST00000252622 SMCR8Q8TEV9 937 aaPredicted RBP29.95■■■□□ 2.39
LSM7-201ENST00000252622 EMILIN3Q9NT22 766 aa29.95■■■□□ 2.39
LSM7-201ENST00000252622 TRIM17Q9Y577 477 aa29.95■■■□□ 2.39
LSM7-201ENST00000252622 OSBPP22059 807 aa29.94■■■□□ 2.38
LSM7-201ENST00000252622 HOXA7P31268 230 aaPredicted RBP29.94■■■□□ 2.38
LSM7-201ENST00000252622 LACTBP83111 547 aaPredicted RBP29.94■■■□□ 2.38
LSM7-201ENST00000252622 ACER1Q8TDN7 264 aa29.94■■■□□ 2.38
LSM7-201ENST00000252622 EFCC1Q9HA90 598 aa29.94■■■□□ 2.38
LSM7-201ENST00000252622 HIP1O00291 1037 aa29.93■■■□□ 2.38
LSM7-201ENST00000252622 CAP1Q01518 475 aa29.93■■■□□ 2.38
LSM7-201ENST00000252622 KIF22Q14807 665 aa29.93■■■□□ 2.38
LSM7-201ENST00000252622 FBXO46Q6PJ61 603 aaPredicted RBP29.93■■■□□ 2.38
LSM7-201ENST00000252622 ZNF287Q9HBT7 754 aa29.93■■■□□ 2.38
LSM7-201ENST00000252622 GSPT1P15170 499 aaKnown RBP29.92■■■□□ 2.38
LSM7-201ENST00000252622 VPS53Q5VIR6 699 aa29.92■■■□□ 2.38
LSM7-201ENST00000252622 ASCC2Q9H1I8 757 aaPredicted RBP29.92■■■□□ 2.38
LSM7-201ENST00000252622 CCDC171Q6TFL3 1326 aa29.92■■■□□ 2.38
LSM7-201ENST00000252622 RASA1P20936 1047 aa29.91■■■□□ 2.38
LSM7-201ENST00000252622 ICA1Q05084 483 aa29.91■■■□□ 2.38
LSM7-201ENST00000252622 PPARAQ07869 468 aa29.91■■■□□ 2.38
LSM7-201ENST00000252622 ALX1Q15699 326 aa29.91■■■□□ 2.38
LSM7-201ENST00000252622 CENPQQ7L2Z9 268 aaPredicted RBP29.91■■■□□ 2.38
LSM7-201ENST00000252622 ZNF589Q86UQ0 364 aaPredicted RBP29.91■■■□□ 2.38
LSM7-201ENST00000252622 MKNK2Q9HBH9 465 aa29.91■■■□□ 2.38
LSM7-201ENST00000252622 DIAPH3Q9NSV4 1193 aa29.91■■■□□ 2.38
LSM7-201ENST00000252622 GCLCP48506 637 aaPredicted RBP29.9■■■□□ 2.38
LSM7-201ENST00000252622 MFAP1P55081 439 aaKnown RBP29.9■■■□□ 2.38
LSM7-201ENST00000252622 IRX3P78415 501 aaPredicted RBP29.9■■■□□ 2.38
LSM7-201ENST00000252622 ZYXQ15942 572 aaKnown RBP29.9■■■□□ 2.38
LSM7-201ENST00000252622 GREB1LQ9C091 1923 aaPredicted RBP29.89■■■□□ 2.38
LSM7-201ENST00000252622 A0A1W2PRG0 241 aa29.89■■■□□ 2.38
LSM7-201ENST00000252622 GNRH1P01148 92 aa29.89■■■□□ 2.38
LSM7-201ENST00000252622 SLC3A2P08195 630 aaKnown RBP29.89■■■□□ 2.38
LSM7-201ENST00000252622 ARHGAP39Q9C0H5 1083 aa29.89■■■□□ 2.38
LSM7-201ENST00000252622 KANSL2Q9H9L4 492 aa29.89■■■□□ 2.38
LSM7-201ENST00000252622 ARHGEF10LQ9HCE6 1279 aa29.89■■■□□ 2.38
LSM7-201ENST00000252622 ZMYM6O95789 1325 aa29.89■■■□□ 2.38
LSM7-201ENST00000252622 SIAH1Q8IUQ4 282 aa29.88■■■□□ 2.37
LSM7-201ENST00000252622 STK11IPQ8N1F8 1099 aa29.88■■■□□ 2.37
LSM7-201ENST00000252622 SH2D4AQ9H788 454 aa29.88■■■□□ 2.37
LSM7-201ENST00000252622 HSPD1P10809 573 aaKnown RBP29.87■■■□□ 2.37
LSM7-201ENST00000252622 VCAM1P19320 739 aa29.87■■■□□ 2.37
LSM7-201ENST00000252622 PDE4BQ07343 736 aa29.87■■■□□ 2.37
LSM7-201ENST00000252622 FAM110CQ1W6H9 321 aa29.87■■■□□ 2.37
LSM7-201ENST00000252622 CLEC10AQ8IUN9 316 aa29.87■■■□□ 2.37
LSM7-201ENST00000252622 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.87■■■□□ 2.37
LSM7-201ENST00000252622 HPS5Q9UPZ3 1129 aa29.87■■■□□ 2.37
LSM7-201ENST00000252622 PTPN22Q9Y2R2 807 aa29.87■■■□□ 2.37
LSM7-201ENST00000252622 USP17L15C9J2P7 530 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 USP17L13C9JLJ4 530 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 USP17L11C9JVI0 530 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 USP17L18D6R9N7 530 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 USP17L22D6RA61 530 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 USP17L17D6RBQ6 530 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 USP17L19D6RCP7 530 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 USP17L20D6RJB6 530 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 USP17L24Q0WX57 530 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 CWC27Q6UX04 472 aaKnown RBP29.86■■■□□ 2.37
LSM7-201ENST00000252622 ANAPC4Q9UJX5 808 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 TMX2Q9Y320 296 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 ZSWIM8A7E2V4 1837 aa29.86■■■□□ 2.37
LSM7-201ENST00000252622 PRDM1O75626 825 aa29.85■■■□□ 2.37
LSM7-201ENST00000252622 CTGFP29279 349 aa29.85■■■□□ 2.37
LSM7-201ENST00000252622 PSMC4P43686 418 aa29.85■■■□□ 2.37
LSM7-201ENST00000252622 ZNF444Q8N0Y2 327 aaPredicted RBP29.85■■■□□ 2.37
LSM7-201ENST00000252622 ANKRD13CQ8N6S4 541 aa29.85■■■□□ 2.37
LSM7-201ENST00000252622 GTF3C2Q8WUA4 911 aaPredicted RBP29.85■■■□□ 2.37
LSM7-201ENST00000252622 P2RX7Q99572 595 aaKnown RBP29.85■■■□□ 2.37
LSM7-201ENST00000252622 CAPN15O75808 1086 aa29.84■■■□□ 2.37
LSM7-201ENST00000252622 FGAP02671 866 aa29.84■■■□□ 2.37
LSM7-201ENST00000252622 NEFLP07196 543 aa29.84■■■□□ 2.37
LSM7-201ENST00000252622 HERVK_113P62684 666 aa29.84■■■□□ 2.37
LSM7-201ENST00000252622 LPAR1Q92633 364 aa29.84■■■□□ 2.37
LSM7-201ENST00000252622 TRIM47Q96LD4 638 aa29.84■■■□□ 2.37
LSM7-201ENST00000252622 PLIN4Q96Q06 1357 aa29.84■■■□□ 2.37
LSM7-201ENST00000252622 EEF2P13639 858 aaKnown RBP29.83■■■□□ 2.37
LSM7-201ENST00000252622 PRMT2P55345 433 aa29.83■■■□□ 2.37
LSM7-201ENST00000252622 FCGRTP55899 365 aa29.83■■■□□ 2.37
LSM7-201ENST00000252622 CATSPERGQ6ZRH7 1159 aa29.83■■■□□ 2.37
LSM7-201ENST00000252622 VCPKMTQ9H867 229 aa29.83■■■□□ 2.37
LSM7-201ENST00000252622 MORF4L1Q9UBU8 362 aa29.83■■■□□ 2.37
LSM7-201ENST00000252622 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.83■■■□□ 2.37
LSM7-201ENST00000252622 IGKV6D-41A0A0C4DH26 115 aa29.82■■■□□ 2.36
LSM7-201ENST00000252622 RPAP3Q9H6T3 665 aaPredicted RBP29.82■■■□□ 2.36
LSM7-201ENST00000252622 FMNL1O95466 1100 aaPredicted RBP29.81■■■□□ 2.36
LSM7-201ENST00000252622 CTDSPL2Q05D32 466 aa29.81■■■□□ 2.36
LSM7-201ENST00000252622 NYAP2Q9P242 653 aa29.81■■■□□ 2.36
LSM7-201ENST00000252622 RAD50Q92878 1312 aa29.8■■■□□ 2.36
LSM7-201ENST00000252622 CCDC85CA6NKD9 419 aa29.8■■■□□ 2.36
LSM7-201ENST00000252622 CENPBP07199 599 aaPredicted RBP29.8■■■□□ 2.36
LSM7-201ENST00000252622 HOXD10P28358 340 aa29.8■■■□□ 2.36
LSM7-201ENST00000252622 NEDD1Q8NHV4 660 aa29.8■■■□□ 2.36
LSM7-201ENST00000252622 SRRDQ9UH36 339 aa29.8■■■□□ 2.36
LSM7-201ENST00000252622 FGRP09769 529 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms