RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 PPP4CP60510 307 aa16.96■□□□□ 0.31
MBD4-201ENST00000249910 NLGN1Q8N2Q7 840 aa16.96■□□□□ 0.31
MBD4-201ENST00000249910 STAG2Q8N3U4 1231 aa16.96■□□□□ 0.31
MBD4-201ENST00000249910 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.96■□□□□ 0.31
MBD4-201ENST00000249910 PRPF3O43395 683 aaKnown RBP16.95■□□□□ 0.3
MBD4-201ENST00000249910 PPP2R5BQ15173 497 aa16.95■□□□□ 0.3
MBD4-201ENST00000249910 TEX11Q8IYF3 940 aa16.95■□□□□ 0.3
MBD4-201ENST00000249910 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
MBD4-201ENST00000249910 RGS22Q8NE09 1264 aa16.95■□□□□ 0.3
MBD4-201ENST00000249910 AKT1S1Q96B36 256 aa16.95■□□□□ 0.3
MBD4-201ENST00000249910 LDHCP07864 332 aa16.95■□□□□ 0.3
MBD4-201ENST00000249910 TSPY3P0CV98 308 aa16.95■□□□□ 0.3
MBD4-201ENST00000249910 TSPY8P0CW00 308 aa16.95■□□□□ 0.3
MBD4-201ENST00000249910 LONRF3Q496Y0 759 aa16.95■□□□□ 0.3
MBD4-201ENST00000249910 NRBP1Q9UHY1 535 aa16.95■□□□□ 0.3
MBD4-201ENST00000249910 GPR75-ASB3A0A0A6YYF3 556 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 BECN2A8MW95 431 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 DDAH1O94760 285 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 CALM1P0DP23 149 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 CALM2P0DP24 149 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 CALM3P0DP25 149 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 RILPL1Q5EBL4 403 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 DHX40Q8IX18 779 aaKnown RBP16.94■□□□□ 0.3
MBD4-201ENST00000249910 SP8Q8IXZ3 490 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
MBD4-201ENST00000249910 PNMA1Q8ND90 353 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 PHF20Q9BVI0 1012 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 KAT14Q9H8E8 782 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 RBM28Q9NW13 759 aaKnown RBP16.94■□□□□ 0.3
MBD4-201ENST00000249910 ANO10Q9NW15 660 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 HPSEQ9Y251 543 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 ATP6V0A2Q9Y487 856 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 CNTNAP5Q8WYK1 1306 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 GOLGA6L19H0YKK7 550 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 RHBDL3P58872 404 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 USP49Q70CQ1 688 aa16.94■□□□□ 0.3
MBD4-201ENST00000249910 KRI1Q8N9T8 703 aaKnown RBP16.94■□□□□ 0.3
MBD4-201ENST00000249910 ZNF219Q9P2Y4 722 aaPredicted RBP16.94■□□□□ 0.3
MBD4-201ENST00000249910 PLSCR1O15162 318 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 FOXN1O15353 648 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 XBP1P17861 261 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 PICALMQ13492 652 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 PNOCQ13519 176 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 NPY5RQ15761 445 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 RESP18Q5W5W9 173 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 DRC7Q8IY82 874 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 AOPEPQ8N6M6 819 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 PDILTQ8N807 584 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
MBD4-201ENST00000249910 CPVLQ9H3G5 476 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 KCNQ5Q9NR82 932 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 KCNH3Q9ULD8 1083 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 FLT1P17948 1338 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 ZNF500O60304 480 aaPredicted RBP16.93■□□□□ 0.3
MBD4-201ENST00000249910 GOLGA8HP0CJ92 632 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 AMOTL1Q8IY63 956 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 CERS5Q8N5B7 392 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 ZNF622Q969S3 477 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■■■□ 19.4
MBD4-201ENST00000249910 CCDC88AQ3V6T2 1871 aa16.93■□□□□ 0.3
MBD4-201ENST00000249910 RASA1P20936 1047 aa16.92■□□□□ 0.3
MBD4-201ENST00000249910 SCNN1DP51172 638 aa16.92■□□□□ 0.3
MBD4-201ENST00000249910 ZRSR1Q15695 479 aaKnown RBP16.92■□□□□ 0.3
MBD4-201ENST00000249910 IPO4Q8TEX9 1081 aaKnown RBP16.92■□□□□ 0.3
MBD4-201ENST00000249910 GPKOWQ92917 476 aaPredicted RBP eCLIP16.92■□□□□ 0.32e-7■■■□□ 18.7
MBD4-201ENST00000249910 KCNF1Q9H3M0 494 aa16.92■□□□□ 0.3
MBD4-201ENST00000249910 ECM29Q5VYK3 1845 aa16.92■□□□□ 0.3
MBD4-201ENST00000249910 KRT2P35908 639 aa16.92■□□□□ 0.3
MBD4-201ENST00000249910 FOXP4Q8IVH2 680 aaPredicted RBP16.92■□□□□ 0.3
MBD4-201ENST00000249910 FBXO2Q9UK22 296 aaPredicted RBP16.92■□□□□ 0.3
MBD4-201ENST00000249910 DAGLAQ9Y4D2 1042 aa16.92■□□□□ 0.3
MBD4-201ENST00000249910 CUTAO60888 179 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 PTGS1P23219 599 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 CDK8P49336 464 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 ZNF75DP51815 510 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 TMED8Q6PL24 325 aaPredicted RBP16.91■□□□□ 0.3
MBD4-201ENST00000249910 DPP8Q6V1X1 898 aaPredicted RBP16.91■□□□□ 0.3
MBD4-201ENST00000249910 CEP57L1Q8IYX8 460 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 ZBTB22O15209 634 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 SLURP2P0DP57 97 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 SCG2P13521 617 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 PTPREP23469 700 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 ZNF174Q15697 407 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 ZNF772Q68DY9 489 aaPredicted RBP16.91■□□□□ 0.3
MBD4-201ENST00000249910 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 DGKHQ86XP1 1220 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 PARP3Q9Y6F1 533 aa16.91■□□□□ 0.3
MBD4-201ENST00000249910 POLR2DO15514 142 aaKnown RBP16.9■□□□□ 0.3
MBD4-201ENST00000249910 CAVIN2O95810 425 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 SLC35G1Q2M3R5 365 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 CCDC186Q7Z3E2 898 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 METTL16Q86W50 562 aaKnown RBP16.9■□□□□ 0.3
MBD4-201ENST00000249910 CNNM3Q8NE01 707 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 TMEM47Q9BQJ4 181 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 PDCL3Q9H2J4 239 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 DBNDD1Q9H9R9 158 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 NPR1P16066 1061 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 NLRP5P59047 1200 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 PIK3AP1Q6ZUJ8 805 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 TBC1D22AQ8WUA7 517 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 EYA3Q99504 573 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms