RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TREML2Q5T2D2 321 aa29.05■■■□□ 2.24
SDF2L1-201ENST00000248958 CENPQQ7L2Z9 268 aaPredicted RBP29.05■■■□□ 2.24
SDF2L1-201ENST00000248958 KIAA1683Q9H0B3 1180 aa29.05■■■□□ 2.24
SDF2L1-201ENST00000248958 A0A0D9SFI3 127 aa29.04■■■□□ 2.24
SDF2L1-201ENST00000248958 NEFLP07196 543 aa29.04■■■□□ 2.24
SDF2L1-201ENST00000248958 CYP2C8P10632 490 aa29.04■■■□□ 2.24
SDF2L1-201ENST00000248958 CD99L2Q8TCZ2 262 aa29.04■■■□□ 2.24
SDF2L1-201ENST00000248958 SMCR8Q8TEV9 937 aaPredicted RBP29.04■■■□□ 2.24
SDF2L1-201ENST00000248958 C12orf42Q96LP6 360 aa29.04■■■□□ 2.24
SDF2L1-201ENST00000248958 MKNK2Q9HBH9 465 aa29.04■■■□□ 2.24
SDF2L1-201ENST00000248958 CPA4Q9UI42 421 aa29.04■■■□□ 2.24
SDF2L1-201ENST00000248958 SMIM22K7EJ46 135 aa29.03■■■□□ 2.24
SDF2L1-201ENST00000248958 AKR1B1P15121 316 aa29.03■■■□□ 2.24
SDF2L1-201ENST00000248958 HOXA7P31268 230 aaPredicted RBP29.03■■■□□ 2.24
SDF2L1-201ENST00000248958 DIAPH3Q9NSV4 1193 aa29.03■■■□□ 2.24
SDF2L1-201ENST00000248958 CENPBP07199 599 aaPredicted RBP29.02■■■□□ 2.24
SDF2L1-201ENST00000248958 ALX1Q15699 326 aa29.02■■■□□ 2.24
SDF2L1-201ENST00000248958 ABHD8Q96I13 439 aa29.02■■■□□ 2.24
SDF2L1-201ENST00000248958 EFCC1Q9HA90 598 aa29.02■■■□□ 2.24
SDF2L1-201ENST00000248958 EMILIN3Q9NT22 766 aa29.02■■■□□ 2.24
SDF2L1-201ENST00000248958 TRIM17Q9Y577 477 aa29.02■■■□□ 2.24
SDF2L1-201ENST00000248958 CCDC171Q6TFL3 1326 aa29.01■■■□□ 2.23
SDF2L1-201ENST00000248958 BCRP11274 1271 aa29.01■■■□□ 2.23
SDF2L1-201ENST00000248958 LACTBP83111 547 aaPredicted RBP29.01■■■□□ 2.23
SDF2L1-201ENST00000248958 PDE4BQ07343 736 aa29.01■■■□□ 2.23
SDF2L1-201ENST00000248958 FBXO46Q6PJ61 603 aaPredicted RBP29.01■■■□□ 2.23
SDF2L1-201ENST00000248958 SH2D4AQ9H788 454 aa29.01■■■□□ 2.23
SDF2L1-201ENST00000248958 ARHGEF10LQ9HCE6 1279 aa29.01■■■□□ 2.23
SDF2L1-201ENST00000248958 GNRH1P01148 92 aa29■■■□□ 2.23
SDF2L1-201ENST00000248958 GCLCP48506 637 aaPredicted RBP29■■■□□ 2.23
SDF2L1-201ENST00000248958 IRX3P78415 501 aaPredicted RBP29■■■□□ 2.23
SDF2L1-201ENST00000248958 PPARAQ07869 468 aa29■■■□□ 2.23
SDF2L1-201ENST00000248958 OTOP1Q7RTM1 612 aa29■■■□□ 2.23
SDF2L1-201ENST00000248958 ZNF444Q8N0Y2 327 aaPredicted RBP29■■■□□ 2.23
SDF2L1-201ENST00000248958 ACER1Q8TDN7 264 aa29■■■□□ 2.23
SDF2L1-201ENST00000248958 KANSL2Q9H9L4 492 aa29■■■□□ 2.23
SDF2L1-201ENST00000248958 GREB1LQ9C091 1923 aaPredicted RBP28.99■■■□□ 2.23
SDF2L1-201ENST00000248958 RASA1P20936 1047 aa28.99■■■□□ 2.23
SDF2L1-201ENST00000248958 ICA1Q05084 483 aa28.99■■■□□ 2.23
SDF2L1-201ENST00000248958 ASCC2Q9H1I8 757 aaPredicted RBP28.99■■■□□ 2.23
SDF2L1-201ENST00000248958 ZMYM6O95789 1325 aa28.98■■■□□ 2.23
SDF2L1-201ENST00000248958 FOXP2O15409 715 aa28.98■■■□□ 2.23
SDF2L1-201ENST00000248958 GSPT1P15170 499 aaKnown RBP28.98■■■□□ 2.23
SDF2L1-201ENST00000248958 VPS53Q5VIR6 699 aa28.98■■■□□ 2.23
SDF2L1-201ENST00000248958 HSPD1P10809 573 aaKnown RBP28.97■■■□□ 2.23
SDF2L1-201ENST00000248958 ZYXQ15942 572 aaKnown RBP28.97■■■□□ 2.23
SDF2L1-201ENST00000248958 CWC27Q6UX04 472 aaKnown RBP28.97■■■□□ 2.23
SDF2L1-201ENST00000248958 ZNF589Q86UQ0 364 aaPredicted RBP28.97■■■□□ 2.23
SDF2L1-201ENST00000248958 STK11IPQ8N1F8 1099 aa28.97■■■□□ 2.23
SDF2L1-201ENST00000248958 GTF3C2Q8WUA4 911 aaPredicted RBP28.97■■■□□ 2.23
SDF2L1-201ENST00000248958 TMX2Q9Y320 296 aa28.97■■■□□ 2.23
SDF2L1-201ENST00000248958 MGAMO43451 1857 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 USP17L15C9J2P7 530 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 USP17L13C9JLJ4 530 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 USP17L11C9JVI0 530 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 USP17L18D6R9N7 530 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 USP17L22D6RA61 530 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 USP17L17D6RBQ6 530 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 USP17L19D6RCP7 530 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 USP17L20D6RJB6 530 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 USP17L24Q0WX57 530 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 ANAPC4Q9UJX5 808 aa28.96■■■□□ 2.23
SDF2L1-201ENST00000248958 A0A1W2PRG0 241 aa28.95■■■□□ 2.22
SDF2L1-201ENST00000248958 HOXD10P28358 340 aa28.95■■■□□ 2.22
SDF2L1-201ENST00000248958 PRMT2P55345 433 aa28.95■■■□□ 2.22
SDF2L1-201ENST00000248958 FAM110CQ1W6H9 321 aa28.95■■■□□ 2.22
SDF2L1-201ENST00000248958 PTPN22Q9Y2R2 807 aa28.95■■■□□ 2.22
SDF2L1-201ENST00000248958 FGAP02671 866 aa28.94■■■□□ 2.22
SDF2L1-201ENST00000248958 VCAM1P19320 739 aa28.94■■■□□ 2.22
SDF2L1-201ENST00000248958 LPAR1Q92633 364 aa28.94■■■□□ 2.22
SDF2L1-201ENST00000248958 CCDC136Q96JN2 1154 aa28.94■■■□□ 2.22
SDF2L1-201ENST00000248958 PSMC4P43686 418 aa28.93■■■□□ 2.22
SDF2L1-201ENST00000248958 FCGRTP55899 365 aa28.93■■■□□ 2.22
SDF2L1-201ENST00000248958 CATSPERGQ6ZRH7 1159 aa28.93■■■□□ 2.22
SDF2L1-201ENST00000248958 SIAH1Q8IUQ4 282 aa28.93■■■□□ 2.22
SDF2L1-201ENST00000248958 ANKRD13CQ8N6S4 541 aa28.93■■■□□ 2.22
SDF2L1-201ENST00000248958 RUFY2Q8WXA3 655 aa28.93■■■□□ 2.22
SDF2L1-201ENST00000248958 EEF2P13639 858 aaKnown RBP28.92■■■□□ 2.22
SDF2L1-201ENST00000248958 P2RX7Q99572 595 aaKnown RBP28.92■■■□□ 2.22
SDF2L1-201ENST00000248958 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.92■■■□□ 2.22
SDF2L1-201ENST00000248958 VCPKMTQ9H867 229 aa28.92■■■□□ 2.22
SDF2L1-201ENST00000248958 NYAP2Q9P242 653 aa28.92■■■□□ 2.22
SDF2L1-201ENST00000248958 HPS5Q9UPZ3 1129 aa28.92■■■□□ 2.22
SDF2L1-201ENST00000248958 RAD50Q92878 1312 aa28.92■■■□□ 2.22
SDF2L1-201ENST00000248958 PLIN4Q96Q06 1357 aa28.91■■■□□ 2.22
SDF2L1-201ENST00000248958 PRDM1O75626 825 aa28.91■■■□□ 2.22
SDF2L1-201ENST00000248958 FMNL1O95466 1100 aaPredicted RBP28.91■■■□□ 2.22
SDF2L1-201ENST00000248958 HERVK_113P62684 666 aa28.91■■■□□ 2.22
SDF2L1-201ENST00000248958 CAP1Q01518 475 aa28.91■■■□□ 2.22
SDF2L1-201ENST00000248958 ARHGAP39Q9C0H5 1083 aa28.91■■■□□ 2.22
SDF2L1-201ENST00000248958 MORF4L1Q9UBU8 362 aa28.91■■■□□ 2.22
SDF2L1-201ENST00000248958 ZSWIM8A7E2V4 1837 aa28.9■■■□□ 2.22
SDF2L1-201ENST00000248958 TSPY3P0CV98 308 aa28.9■■■□□ 2.22
SDF2L1-201ENST00000248958 TSPY8P0CW00 308 aa28.9■■■□□ 2.22
SDF2L1-201ENST00000248958 PPP4R3BQ5MIZ7 849 aa28.9■■■□□ 2.22
SDF2L1-201ENST00000248958 CLEC10AQ8IUN9 316 aa28.9■■■□□ 2.22
SDF2L1-201ENST00000248958 NEDD1Q8NHV4 660 aa28.9■■■□□ 2.22
SDF2L1-201ENST00000248958 RPAP3Q9H6T3 665 aaPredicted RBP28.9■■■□□ 2.22
SDF2L1-201ENST00000248958 GOPCQ9HD26 462 aa28.9■■■□□ 2.22
SDF2L1-201ENST00000248958 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms