RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 IFNL3Q8IZI9 196 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 DYNLL2Q96FJ2 89 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 TRIM17Q9Y577 477 aa15.27■□□□□ 0.04
VPREB3-201ENST00000248948 PLIN4Q96Q06 1357 aa15.26■□□□□ 0.03
VPREB3-201ENST00000248948 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
VPREB3-201ENST00000248948 OSBPP22059 807 aa15.26■□□□□ 0.03
VPREB3-201ENST00000248948 HOXA7P31268 230 aaPredicted RBP15.26■□□□□ 0.03
VPREB3-201ENST00000248948 GUCY1A2P33402 732 aa15.26■□□□□ 0.03
VPREB3-201ENST00000248948 GCLCP48506 637 aaPredicted RBP15.26■□□□□ 0.03
VPREB3-201ENST00000248948 CDK8P49336 464 aa15.26■□□□□ 0.03
VPREB3-201ENST00000248948 NAPBQ9H115 298 aa15.26■□□□□ 0.03
VPREB3-201ENST00000248948 EFCC1Q9HA90 598 aa15.26■□□□□ 0.03
VPREB3-201ENST00000248948 ZNF287Q9HBT7 754 aa15.26■□□□□ 0.03
VPREB3-201ENST00000248948 CPA4Q9UI42 421 aa15.26■□□□□ 0.03
VPREB3-201ENST00000248948 A0A0D9SFI3 127 aa15.25■□□□□ 0.03
VPREB3-201ENST00000248948 HIP1O00291 1037 aa15.25■□□□□ 0.03
VPREB3-201ENST00000248948 APPP05067 770 aa15.25■□□□□ 0.03
VPREB3-201ENST00000248948 AKR1B1P15121 316 aa15.25■□□□□ 0.03
VPREB3-201ENST00000248948 IRX3P78415 501 aaPredicted RBP15.25■□□□□ 0.03
VPREB3-201ENST00000248948 SEPT2Q15019 361 aa15.25■□□□□ 0.03
VPREB3-201ENST00000248948 FAM110CQ1W6H9 321 aa15.25■□□□□ 0.03
VPREB3-201ENST00000248948 GTF3C2Q8WUA4 911 aaPredicted RBP15.25■□□□□ 0.03
VPREB3-201ENST00000248948 RILPL2Q969X0 211 aa15.25■□□□□ 0.03
VPREB3-201ENST00000248948 ASCC2Q9H1I8 757 aaPredicted RBP15.25■□□□□ 0.03
VPREB3-201ENST00000248948 SH2D4AQ9H788 454 aa15.25■□□□□ 0.03
VPREB3-201ENST00000248948 HPS5Q9UPZ3 1129 aa15.25■□□□□ 0.03
VPREB3-201ENST00000248948 PLXNB2O15031 1838 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 CCDC171Q6TFL3 1326 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 SMIM22K7EJ46 135 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 FOXP2O15409 715 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 PDE4AP27815 886 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 MFAP1P55081 439 aaKnown RBP15.24■□□□□ 0.03
VPREB3-201ENST00000248948 PRMT2P55345 433 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 ICA1Q05084 483 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 MCMDC2Q4G0Z9 681 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 CCDC129Q6ZRS4 1044 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 FAM227BQ96M60 508 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 ARHGEF10LQ9HCE6 1279 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 EMILIN3Q9NT22 766 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 PTPN22Q9Y2R2 807 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 COL11A1P12107 1806 aaPredicted RBP15.24■□□□□ 0.03
VPREB3-201ENST00000248948 ZNF236Q9UL36 1845 aa15.24■□□□□ 0.03
VPREB3-201ENST00000248948 MINDY4BA8MYZ0 360 aa15.23■□□□□ 0.03
VPREB3-201ENST00000248948 SLC3A2P08195 630 aaKnown RBP15.23■□□□□ 0.03
VPREB3-201ENST00000248948 VCAM1P19320 739 aa15.23■□□□□ 0.03
VPREB3-201ENST00000248948 SDSP20132 328 aa15.23■□□□□ 0.03
VPREB3-201ENST00000248948 CAP1Q01518 475 aa15.23■□□□□ 0.03
VPREB3-201ENST00000248948 NMIQ13287 307 aaPredicted RBP15.23■□□□□ 0.03
VPREB3-201ENST00000248948 TTC22Q5TAA0 569 aa15.23■□□□□ 0.03
VPREB3-201ENST00000248948 ACER1Q8TDN7 264 aa15.23■□□□□ 0.03
VPREB3-201ENST00000248948 LPAR1Q92633 364 aa15.23■□□□□ 0.03
VPREB3-201ENST00000248948 RASA1P20936 1047 aa15.22■□□□□ 0.03
VPREB3-201ENST00000248948 FCGRTP55899 365 aa15.22■□□□□ 0.03
VPREB3-201ENST00000248948 PPARAQ07869 468 aa15.22■□□□□ 0.03
VPREB3-201ENST00000248948 ZYXQ15942 572 aaKnown RBP15.22■□□□□ 0.03
VPREB3-201ENST00000248948 CENPQQ7L2Z9 268 aaPredicted RBP15.22■□□□□ 0.03
VPREB3-201ENST00000248948 KANSL2Q9H9L4 492 aa15.22■□□□□ 0.03
VPREB3-201ENST00000248948 MKNK2Q9HBH9 465 aa15.22■□□□□ 0.03
VPREB3-201ENST00000248948 DIAPH3Q9NSV4 1193 aa15.22■□□□□ 0.03
VPREB3-201ENST00000248948 MORF4L1Q9UBU8 362 aa15.22■□□□□ 0.03
VPREB3-201ENST00000248948 TMX2Q9Y320 296 aa15.22■□□□□ 0.03
VPREB3-201ENST00000248948 DOCK3Q8IZD9 2030 aa15.22■□□□□ 0.03
VPREB3-201ENST00000248948 CENPFP49454 3210 aa15.22■□□□□ 0.03
VPREB3-201ENST00000248948 A0A1W2PRG0 241 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 USP17L15C9J2P7 530 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 USP17L13C9JLJ4 530 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 USP17L11C9JVI0 530 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 USP17L18D6R9N7 530 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 USP17L22D6RA61 530 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 USP17L17D6RBQ6 530 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 USP17L19D6RCP7 530 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 USP17L20D6RJB6 530 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 CAPN15O75808 1086 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 GSPT1P15170 499 aaKnown RBP15.21■□□□□ 0.03
VPREB3-201ENST00000248948 PSMC4P43686 418 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 HERVK_113P62684 666 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 PDE4BQ07343 736 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 USP17L24Q0WX57 530 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 ALX1Q15699 326 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 ZNF589Q86UQ0 364 aaPredicted RBP15.21■□□□□ 0.03
VPREB3-201ENST00000248948 ANKRD13CQ8N6S4 541 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 TRIM47Q96LD4 638 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 ARHGAP39Q9C0H5 1083 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 ANAPC4Q9UJX5 808 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 SYNPO2Q9UMS6 1093 aa15.21■□□□□ 0.03
VPREB3-201ENST00000248948 RAD50Q92878 1312 aa15.2■□□□□ 0.02
VPREB3-201ENST00000248948 HOXD10P28358 340 aa15.2■□□□□ 0.02
VPREB3-201ENST00000248948 CTGFP29279 349 aa15.2■□□□□ 0.02
VPREB3-201ENST00000248948 VPS53Q5VIR6 699 aa15.2■□□□□ 0.02
VPREB3-201ENST00000248948 LBX2Q6XYB7 198 aa15.2■□□□□ 0.02
VPREB3-201ENST00000248948 CLEC10AQ8IUN9 316 aa15.2■□□□□ 0.02
VPREB3-201ENST00000248948 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.2■□□□□ 0.02
VPREB3-201ENST00000248948 VCPKMTQ9H867 229 aa15.2■□□□□ 0.02
VPREB3-201ENST00000248948 SRRDQ9UH36 339 aa15.2■□□□□ 0.02
VPREB3-201ENST00000248948 MYPNQ86TC9 1320 aa15.19■□□□□ 0.02
VPREB3-201ENST00000248948 IGKV6D-41A0A0C4DH26 115 aa15.19■□□□□ 0.02
VPREB3-201ENST00000248948 CCDC85CA6NKD9 419 aa15.19■□□□□ 0.02
VPREB3-201ENST00000248948 FMNL1O95466 1100 aaPredicted RBP15.19■□□□□ 0.02
VPREB3-201ENST00000248948 HSPD1P10809 573 aaKnown RBP15.19■□□□□ 0.02
VPREB3-201ENST00000248948 CATSPERGQ6ZRH7 1159 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms