RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 WDR93Q6P2C0 686 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 ZBTB10Q96DT7 871 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 SEC31BQ9NQW1 1179 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 A2ML1A8K2U0 1454 aa20.56■□□□□ 0.88
PTPN12-201ENST00000248594 GRIN2DO15399 1336 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 KIF4AO95239 1232 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 MCM3P25205 808 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 CCNI2Q6ZMN8 369 aaPredicted RBP20.55■□□□□ 0.88
PTPN12-201ENST00000248594 CNGA4Q8IV77 575 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 MICAL1Q8TDZ2 1067 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 UPP2O95045 317 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 NAP1L1P55209 391 aaKnown RBP20.55■□□□□ 0.88
PTPN12-201ENST00000248594 TIMM10P62072 90 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 CYP27A1Q02318 531 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 RNPC3Q96LT9 517 aaKnown RBP20.55■□□□□ 0.88
PTPN12-201ENST00000248594 ZNF609O15014 1411 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 OPA1O60313 960 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 TUBBP07437 444 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 SMCR8Q8TEV9 937 aaPredicted RBP20.55■□□□□ 0.88
PTPN12-201ENST00000248594 VIPAS39Q9H9C1 493 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 CTNND2Q9UQB3 1225 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 DUSP10Q9Y6W6 482 aa20.55■□□□□ 0.88
PTPN12-201ENST00000248594 PDE2AO00408 941 aaPredicted RBP20.54■□□□□ 0.88
PTPN12-201ENST00000248594 AP1G2O75843 785 aa20.54■□□□□ 0.88
PTPN12-201ENST00000248594 CSB-PGBD3P0DP91 1061 aa20.54■□□□□ 0.88
PTPN12-201ENST00000248594 CCDC181Q5TID7 509 aa20.54■□□□□ 0.88
PTPN12-201ENST00000248594 NAA35Q5VZE5 725 aa20.54■□□□□ 0.88
PTPN12-201ENST00000248594 TSEN2Q8NCE0 465 aaKnown RBP20.54■□□□□ 0.88
PTPN12-201ENST00000248594 MED15Q96RN5 788 aa20.54■□□□□ 0.88
PTPN12-201ENST00000248594 LRRC1Q9BTT6 524 aa20.54■□□□□ 0.88
PTPN12-201ENST00000248594 IPO7O95373 1038 aaKnown RBP20.54■□□□□ 0.88
PTPN12-201ENST00000248594 ODF2Q5BJF6 829 aa20.54■□□□□ 0.88
PTPN12-201ENST00000248594 TACO1Q9BSH4 297 aaKnown RBP20.54■□□□□ 0.88
PTPN12-201ENST00000248594 KCNJ14Q9UNX9 436 aa20.54■□□□□ 0.88
PTPN12-201ENST00000248594 EPN1Q9Y6I3 576 aaPredicted RBP20.54■□□□□ 0.88
PTPN12-201ENST00000248594 HSPD1P10809 573 aaKnown RBP20.53■□□□□ 0.88
PTPN12-201ENST00000248594 FNTAP49354 379 aa20.53■□□□□ 0.88
PTPN12-201ENST00000248594 USPL1Q5W0Q7 1092 aa20.53■□□□□ 0.88
PTPN12-201ENST00000248594 PNMA8AQ86V59 439 aaPredicted RBP20.53■□□□□ 0.88
PTPN12-201ENST00000248594 SYNRGQ9UMZ2 1314 aa20.53■□□□□ 0.88
PTPN12-201ENST00000248594 MPHOSPH10O00566 681 aaKnown RBP20.53■□□□□ 0.88
PTPN12-201ENST00000248594 PREPLQ4J6C6 727 aaPredicted RBP20.53■□□□□ 0.88
PTPN12-201ENST00000248594 TTMPQ5BVD1 217 aa20.53■□□□□ 0.88
PTPN12-201ENST00000248594 DENND2AQ9ULE3 1009 aa20.53■□□□□ 0.88
PTPN12-201ENST00000248594 HOXC9P31274 260 aa20.53■□□□□ 0.88
PTPN12-201ENST00000248594 TMTC1Q8IUR5 882 aa20.53■□□□□ 0.88
PTPN12-201ENST00000248594 MLKLQ8NB16 471 aa20.53■□□□□ 0.88
PTPN12-201ENST00000248594 ENOX1Q8TC92 643 aaKnown RBP20.53■□□□□ 0.88
PTPN12-201ENST00000248594 CCDC43Q96MW1 224 aaKnown RBP20.53■□□□□ 0.88
PTPN12-201ENST00000248594 UBR1Q8IWV7 1749 aa20.53■□□□□ 0.88
PTPN12-201ENST00000248594 EPHA10Q5JZY3 1008 aa20.52■□□□□ 0.88
PTPN12-201ENST00000248594 CYP26C1Q6V0L0 522 aa20.52■□□□□ 0.88
PTPN12-201ENST00000248594 CMTR1Q8N1G2 835 aaKnown RBP20.52■□□□□ 0.88
PTPN12-201ENST00000248594 ZNF473Q8WTR7 871 aaKnown RBP20.52■□□□□ 0.88
PTPN12-201ENST00000248594 UBXN1Q04323 297 aa20.52■□□□□ 0.88
PTPN12-201ENST00000248594 MYO1EQ12965 1108 aa20.52■□□□□ 0.88
PTPN12-201ENST00000248594 AP1ARQ63HQ0 302 aa20.52■□□□□ 0.88
PTPN12-201ENST00000248594 PARP9Q8IXQ6 854 aa20.52■□□□□ 0.88
PTPN12-201ENST00000248594 KRI1Q8N9T8 703 aaKnown RBP20.52■□□□□ 0.88
PTPN12-201ENST00000248594 ZNF274Q96GC6 653 aaPredicted RBP20.52■□□□□ 0.88
PTPN12-201ENST00000248594 BLZF1Q9H2G9 400 aa20.52■□□□□ 0.88
PTPN12-201ENST00000248594 CPSF2Q9P2I0 782 aaKnown RBP20.52■□□□□ 0.88
PTPN12-201ENST00000248594 ZNF18P17022 549 aa20.52■□□□□ 0.87
PTPN12-201ENST00000248594 LSP1P33241 339 aa20.52■□□□□ 0.87
PTPN12-201ENST00000248594 EXOSC10Q01780 885 aaKnown RBP20.52■□□□□ 0.87
PTPN12-201ENST00000248594 SLC26A6Q9BXS9 759 aa20.52■□□□□ 0.87
PTPN12-201ENST00000248594 SHOX2O60902 331 aaPredicted RBP20.51■□□□□ 0.87
PTPN12-201ENST00000248594 TUBB2AQ13885 445 aa20.51■□□□□ 0.87
PTPN12-201ENST00000248594 ACCSLQ4AC99 568 aa20.51■□□□□ 0.87
PTPN12-201ENST00000248594 CFAP58Q5T655 872 aa20.51■□□□□ 0.87
PTPN12-201ENST00000248594 TUBB2BQ9BVA1 445 aa20.51■□□□□ 0.87
PTPN12-201ENST00000248594 IRAK4Q9NWZ3 460 aa20.51■□□□□ 0.87
PTPN12-201ENST00000248594 BUB1BO60566 1050 aaPredicted RBP20.51■□□□□ 0.87
PTPN12-201ENST00000248594 SNX1Q13596 522 aa20.51■□□□□ 0.87
PTPN12-201ENST00000248594 CCT8L2Q96SF2 557 aa20.51■□□□□ 0.87
PTPN12-201ENST00000248594 FAM184BQ9ULE4 1060 aa20.51■□□□□ 0.87
PTPN12-201ENST00000248594 A0A1B0GTH6 734 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 TUBB4BP68371 445 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 TNNI3KQ59H18 835 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 ANKRD13CQ8N6S4 541 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 YIPF3Q9GZM5 350 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 ABHD10Q9NUJ1 306 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 FPGT-TNNI3KV9GXZ4 949 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 BTBD18B2RXH4 712 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 GOLGA8KD6RF30 607 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 GRIPAP1Q4V328 841 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 TCP11Q8WWU5 503 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 NAA15Q9BXJ9 866 aaKnown RBP20.5■□□□□ 0.87
PTPN12-201ENST00000248594 ARHGEF10O15013 1369 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 ZC3H4Q9UPT8 1303 aaKnown RBP20.5■□□□□ 0.87
PTPN12-201ENST00000248594 CD44P16070 742 aaKnown RBP20.5■□□□□ 0.87
PTPN12-201ENST00000248594 RESP18Q5W5W9 173 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 PARD3BQ8TEW8 1205 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 TPX2Q9ULW0 747 aaKnown RBP20.5■□□□□ 0.87
PTPN12-201ENST00000248594 CDC42BPGQ6DT37 1551 aa20.5■□□□□ 0.87
PTPN12-201ENST00000248594 NDUFA10O95299 355 aa20.49■□□□□ 0.87
PTPN12-201ENST00000248594 METAP2P50579 478 aaKnown RBP eCLIP20.49■□□□□ 0.87
PTPN12-201ENST00000248594 CKAP4Q07065 602 aaKnown RBP20.49■□□□□ 0.87
PTPN12-201ENST00000248594 SEMA3FQ13275 785 aa20.49■□□□□ 0.87
PTPN12-201ENST00000248594 CYB5D1Q6P9G0 228 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms