RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 CLCN6P51797 869 aa17.77■□□□□ 0.43
CTSD-201ENST00000236671 NR5A1Q13285 461 aa17.77■□□□□ 0.43
CTSD-201ENST00000236671 ARHGAP29Q52LW3 1261 aa17.77■□□□□ 0.43
CTSD-201ENST00000236671 HSP90AA4PQ58FG1 418 aa17.77■□□□□ 0.43
CTSD-201ENST00000236671 RRP12Q5JTH9 1297 aaKnown RBP17.77■□□□□ 0.43
CTSD-201ENST00000236671 CRACR2BQ8N4Y2 399 aaPredicted RBP17.77■□□□□ 0.43
CTSD-201ENST00000236671 ZNF579Q8NAF0 562 aaKnown RBP17.77■□□□□ 0.43
CTSD-201ENST00000236671 MLKLQ8NB16 471 aa17.77■□□□□ 0.43
CTSD-201ENST00000236671 PPP2R2CQ9Y2T4 447 aa17.77■□□□□ 0.43
CTSD-201ENST00000236671 NFE2L3Q9Y4A8 694 aa17.77■□□□□ 0.43
CTSD-201ENST00000236671 PCDHB6Q9Y5E3 794 aa17.77■□□□□ 0.43
CTSD-201ENST00000236671 PARP3Q9Y6F1 533 aa17.77■□□□□ 0.43
CTSD-201ENST00000236671 SCN7AQ01118 1682 aa17.76■□□□□ 0.43
CTSD-201ENST00000236671 CAMTA2O94983 1202 aa17.76■□□□□ 0.43
CTSD-201ENST00000236671 GYS1P13807 737 aa17.76■□□□□ 0.43
CTSD-201ENST00000236671 TDO2P48775 406 aa17.76■□□□□ 0.43
CTSD-201ENST00000236671 SART3Q15020 963 aaKnown RBP17.76■□□□□ 0.43
CTSD-201ENST00000236671 ENOX1Q8TC92 643 aaKnown RBP17.76■□□□□ 0.43
CTSD-201ENST00000236671 ACTN4O43707 911 aaKnown RBP17.75■□□□□ 0.43
CTSD-201ENST00000236671 TADA3O75528 432 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 GNAT2P19087 354 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 RCAN1P53805 252 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 TERF2Q15554 542 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 ZNF771Q7L3S4 317 aaPredicted RBP17.75■□□□□ 0.43
CTSD-201ENST00000236671 CMTR1Q8N1G2 835 aaKnown RBP17.75■□□□□ 0.43
CTSD-201ENST00000236671 SMARCE1Q969G3 411 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 MED15Q96RN5 788 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 BAG1Q99933 345 aaPredicted RBP17.75■□□□□ 0.43
CTSD-201ENST00000236671 SRRTQ9BXP5 876 aaKnown RBP17.75■□□□□ 0.43
CTSD-201ENST00000236671 DACH1Q9UI36 760 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 SRPRBQ9Y5M8 271 aaKnown RBP17.75■□□□□ 0.43
CTSD-201ENST00000236671 SLC4A4Q9Y6R1 1079 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 SPECC1LQ69YQ0 1117 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 TRMT44Q8IYL2 757 aaKnown RBP17.75■□□□□ 0.43
CTSD-201ENST00000236671 GRAMD1CQ8IYS0 662 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 TC2NQ8N9U0 490 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 TRIML1Q8N9V2 468 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 OXER1Q8TDS5 423 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 MTA3Q9BTC8 594 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 NACAP1Q9BZK3 213 aa17.75■□□□□ 0.43
CTSD-201ENST00000236671 CCDC24Q8N4L8 307 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 CCDC82Q8N4S0 544 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 SEC31BQ9NQW1 1179 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 TOMM22Q9NS69 142 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 FHOD1Q9Y613 1164 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 CCDC196A0A1B0GTZ2 297 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 ZPR1O75312 459 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 URI1O94763 535 aaPredicted RBP17.74■□□□□ 0.43
CTSD-201ENST00000236671 BMS1Q14692 1282 aaKnown RBP17.74■□□□□ 0.43
CTSD-201ENST00000236671 TBC1D9BQ66K14 1250 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 USP49Q70CQ1 688 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 ZNF654Q8IZM8 581 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 FANCBQ8NB91 859 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 SPATA20Q8TB22 786 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 UBXN4Q92575 508 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 NARFQ9UHQ1 456 aa17.74■□□□□ 0.43
CTSD-201ENST00000236671 ERICH2A1L162 156 aa17.73■□□□□ 0.43
CTSD-201ENST00000236671 STX10O60499 249 aa17.73■□□□□ 0.43
CTSD-201ENST00000236671 TOGARAM2Q6ZUX3 1019 aa17.73■□□□□ 0.43
CTSD-201ENST00000236671 TMTC2Q8N394 836 aa17.73■□□□□ 0.43
CTSD-201ENST00000236671 SHISA4Q96DD7 197 aa17.73■□□□□ 0.43
CTSD-201ENST00000236671 NOL10Q9BSC4 688 aaKnown RBP17.73■□□□□ 0.43
CTSD-201ENST00000236671 CSRNP2Q9H175 543 aa17.73■□□□□ 0.43
CTSD-201ENST00000236671 ST7Q9NRC1 585 aa17.73■□□□□ 0.43
CTSD-201ENST00000236671 CEP131Q9UPN4 1083 aa17.73■□□□□ 0.43
CTSD-201ENST00000236671 GOLGA6L9A6NEM1 432 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 BCAMP50895 628 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 PLCD1P51178 756 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 KANK3Q6NY19 840 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 PDILTQ8N807 584 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 MIGA1Q8NAN2 632 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 MNS1Q8NEH6 495 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 MPHOSPH8Q99549 860 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 CARD6Q9BX69 1037 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 EFCAB8A8MWE9 144 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 ZRANB2O95218 330 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTSD-201ENST00000236671 CDK11BP21127 795 aaKnown RBP17.72■□□□□ 0.43
CTSD-201ENST00000236671 ADKP55263 362 aaKnown RBP17.72■□□□□ 0.43
CTSD-201ENST00000236671 SUSD4Q5VX71 490 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 NUP133Q8WUM0 1156 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 RNF41Q9H4P4 317 aaPredicted RBP17.72■□□□□ 0.43
CTSD-201ENST00000236671 CABP5Q9NP86 173 aa17.72■□□□□ 0.43
CTSD-201ENST00000236671 SAMSN1Q9NSI8 373 aaKnown RBP17.72■□□□□ 0.43
CTSD-201ENST00000236671 PNMA6AP0CW24 399 aaPredicted RBP17.71■□□□□ 0.43
CTSD-201ENST00000236671 PPARAQ07869 468 aa17.71■□□□□ 0.43
CTSD-201ENST00000236671 NR1I3Q14994 352 aa17.71■□□□□ 0.43
CTSD-201ENST00000236671 WDR24Q96S15 920 aa17.71■□□□□ 0.43
CTSD-201ENST00000236671 RAI14Q9P0K7 980 aa17.71■□□□□ 0.43
CTSD-201ENST00000236671 ERCC5P28715 1186 aaPredicted RBP17.71■□□□□ 0.42
CTSD-201ENST00000236671 SEC23AQ15436 765 aa17.71■□□□□ 0.42
CTSD-201ENST00000236671 RNF26Q9BY78 433 aaPredicted RBP17.71■□□□□ 0.42
CTSD-201ENST00000236671 A0A1B0GTH6 734 aa17.7■□□□□ 0.42
CTSD-201ENST00000236671 FAM205CA6NFA0 338 aa17.7■□□□□ 0.42
CTSD-201ENST00000236671 ADRA2BP18089 450 aa17.7■□□□□ 0.42
CTSD-201ENST00000236671 ATP2B1P20020 1258 aa17.7■□□□□ 0.42
CTSD-201ENST00000236671 GNG11P61952 73 aa17.7■□□□□ 0.42
CTSD-201ENST00000236671 APTXQ7Z2E3 356 aaKnown RBP17.7■□□□□ 0.42
CTSD-201ENST00000236671 FAM177A1Q8N128 213 aaPredicted RBP17.7■□□□□ 0.42
CTSD-201ENST00000236671 UBAC1Q9BSL1 405 aa17.7■□□□□ 0.42
CTSD-201ENST00000236671 AATFQ9NY61 560 aaKnown RBP eCLIP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms