RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SRRTQ9BXP5 876 aaKnown RBP18.57■□□□□ 0.56
LTBR-201ENST00000228918 SAMSN1Q9NSI8 373 aaKnown RBP18.57■□□□□ 0.56
LTBR-201ENST00000228918 A0A087X0B3 334 aa18.57■□□□□ 0.56
LTBR-201ENST00000228918 PRPF3O43395 683 aaKnown RBP18.57■□□□□ 0.56
LTBR-201ENST00000228918 ITPK1Q13572 414 aa18.57■□□□□ 0.56
LTBR-201ENST00000228918 EARS2Q5JPH6 523 aaKnown RBP18.57■□□□□ 0.56
LTBR-201ENST00000228918 PARP3Q9Y6F1 533 aa18.57■□□□□ 0.56
LTBR-201ENST00000228918 LOC102724428A0A0B4J2F2 783 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 GOLGA6L9A6NEM1 432 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 GYG1P46976 350 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 SIK1P57059 783 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 DHX58Q96C10 678 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 A0A1B0GTH6 734 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 PLEKHA8P1O95397 391 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 NR1I3Q14994 352 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 ARHGAP29Q52LW3 1261 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 CT47A1Q5JQC4 288 aaPredicted RBP18.56■□□□□ 0.56
LTBR-201ENST00000228918 IFIT1BQ5T764 474 aaKnown RBP18.56■□□□□ 0.56
LTBR-201ENST00000228918 SH3RF1Q7Z6J0 888 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 BRIP1Q9BX63 1249 aa18.56■□□□□ 0.56
LTBR-201ENST00000228918 GNL3LQ9NVN8 582 aaKnown RBP18.56■□□□□ 0.56
LTBR-201ENST00000228918 RBM28Q9NW13 759 aaKnown RBP18.56■□□□□ 0.56
LTBR-201ENST00000228918 TAF1P21675 1872 aa18.55■□□□□ 0.56
LTBR-201ENST00000228918 PRDM1O75626 825 aa18.55■□□□□ 0.56
LTBR-201ENST00000228918 ADKP55263 362 aaKnown RBP18.55■□□□□ 0.56
LTBR-201ENST00000228918 CATIPQ7Z7H3 387 aa18.55■□□□□ 0.56
LTBR-201ENST00000228918 CCDC34Q96HJ3 373 aa18.55■□□□□ 0.56
LTBR-201ENST00000228918 EPSTI1Q96J88 318 aa18.55■□□□□ 0.56
LTBR-201ENST00000228918 CYP2D7A0A087X1C5 515 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 TADA3O75528 432 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 URI1O94763 535 aaPredicted RBP18.54■□□□□ 0.56
LTBR-201ENST00000228918 FGRP09769 529 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 SLFN14P0C7P3 912 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 CLCN6P51797 869 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 DYNLL1P63167 89 aaKnown RBP18.54■□□□□ 0.56
LTBR-201ENST00000228918 TOGARAM2Q6ZUX3 1019 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 APTXQ7Z2E3 356 aaKnown RBP18.54■□□□□ 0.56
LTBR-201ENST00000228918 A0A0G2JS52 829 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 hCG_1642624A0A1W2PR95 340 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 WNT7AO00755 349 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 BMP15O95972 392 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 TROAPQ12815 778 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 UBE4AQ14139 1066 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 SYMPKQ92797 1274 aaKnown RBP18.54■□□□□ 0.56
LTBR-201ENST00000228918 TNFRSF25Q93038 417 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 FERMT2Q96AC1 680 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 LAMB1P07942 1786 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 SYNRGQ9UMZ2 1314 aa18.54■□□□□ 0.56
LTBR-201ENST00000228918 PCP11498 1178 aaKnown RBP18.53■□□□□ 0.56
LTBR-201ENST00000228918 CUL4BQ13620 913 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 NPY5RQ15761 445 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 MNS1Q8NEH6 495 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 UBXN4Q92575 508 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 ACSBG1Q96GR2 724 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 PAGE5Q96GU1 130 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 V9GY48 417 aaPredicted RBP18.53■□□□□ 0.56
LTBR-201ENST00000228918 ROBO1Q9Y6N7 1651 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 WTIPA6NIX2 430 aaPredicted RBP18.53■□□□□ 0.56
LTBR-201ENST00000228918 IGSF3O75054 1194 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 DDAH1O94760 285 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 CALM1P0DP23 149 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 CALM2P0DP24 149 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 CALM3P0DP25 149 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 AFMP43652 599 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 TMTC3Q6ZXV5 915 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 IQCA1Q86XH1 822 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 ANKRD18AQ8IVF6 992 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 ZNF384Q8TF68 577 aa18.53■□□□□ 0.56
LTBR-201ENST00000228918 CDCA7Q9BWT1 371 aaPredicted RBP18.53■□□□□ 0.56
LTBR-201ENST00000228918 COL5A3P25940 1745 aaPredicted RBP18.52■□□□□ 0.56
LTBR-201ENST00000228918 CNTNAP5Q8WYK1 1306 aa18.52■□□□□ 0.56
LTBR-201ENST00000228918 CD44P16070 742 aaKnown RBP18.52■□□□□ 0.56
LTBR-201ENST00000228918 DPYDQ12882 1025 aa18.52■□□□□ 0.56
LTBR-201ENST00000228918 SPATA1Q5VX52 437 aa18.52■□□□□ 0.56
LTBR-201ENST00000228918 WDR24Q96S15 920 aa18.52■□□□□ 0.56
LTBR-201ENST00000228918 CARD6Q9BX69 1037 aa18.52■□□□□ 0.56
LTBR-201ENST00000228918 BRMS1Q9HCU9 246 aa18.52■□□□□ 0.56
LTBR-201ENST00000228918 EFCAB8A8MWE9 144 aa18.52■□□□□ 0.55
LTBR-201ENST00000228918 DDB1Q16531 1140 aa18.52■□□□□ 0.55
LTBR-201ENST00000228918 C3orf67Q6ZVT6 689 aa18.52■□□□□ 0.55
LTBR-201ENST00000228918 FAM177A1Q8N128 213 aaPredicted RBP18.52■□□□□ 0.55
LTBR-201ENST00000228918 ZNF652Q9Y2D9 606 aa18.52■□□□□ 0.55
LTBR-201ENST00000228918 MYH13Q9UKX3 1938 aa18.52■□□□□ 0.55
LTBR-201ENST00000228918 CASP1P29466 404 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 GNG11P61952 73 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 BMS1Q14692 1282 aaKnown RBP18.51■□□□□ 0.55
LTBR-201ENST00000228918 NOM1Q5C9Z4 860 aaKnown RBP18.51■□□□□ 0.55
LTBR-201ENST00000228918 TTC38Q5R3I4 469 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 CDKAL1Q5VV42 579 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 CTR9Q6PD62 1173 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 GSDMAQ96QA5 445 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 NRAPQ86VF7 1730 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 TEX33O43247 280 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 GTF2E1P29083 439 aaPredicted RBP18.51■□□□□ 0.55
LTBR-201ENST00000228918 CASQ1P31415 396 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 SF3B3Q15393 1217 aaKnown RBP18.51■□□□□ 0.55
LTBR-201ENST00000228918 CAVIN4Q5BKX8 364 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 PANX2Q96RD6 677 aa18.51■□□□□ 0.55
LTBR-201ENST00000228918 BSDC1Q9NW68 430 aaPredicted RBP18.51■□□□□ 0.55
LTBR-201ENST00000228918 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms