RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 HSPD1P10809 573 aaKnown RBP15.13■□□□□ 0.01
LSM5-201ENST00000223084 RASA1P20936 1047 aa15.13■□□□□ 0.01
LSM5-201ENST00000223084 PPARAQ07869 468 aa15.13■□□□□ 0.01
LSM5-201ENST00000223084 NOM1Q5C9Z4 860 aaKnown RBP15.13■□□□□ 0.01
LSM5-201ENST00000223084 SH3D19Q5HYK7 790 aa15.13■□□□□ 0.01
LSM5-201ENST00000223084 PROCA1Q8NCQ7 364 aaPredicted RBP15.13■□□□□ 0.01
LSM5-201ENST00000223084 FEZ1Q99689 392 aa15.13■□□□□ 0.01
LSM5-201ENST00000223084 EMILIN3Q9NT22 766 aa15.13■□□□□ 0.01
LSM5-201ENST00000223084 TMOD4Q9NZQ9 345 aa15.13■□□□□ 0.01
LSM5-201ENST00000223084 CPA4Q9UI42 421 aa15.13■□□□□ 0.01
LSM5-201ENST00000223084 TAOK2Q9UL54 1235 aa15.13■□□□□ 0.01
LSM5-201ENST00000223084 ROBO3Q96MS0 1386 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 LOC285556D6RIA3 1793 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 A0A1W2PRG0 241 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 C19orf81C9J6K1 198 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 HIP1O00291 1037 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 ECM2O94769 699 aaPredicted RBP15.12■□□□□ 0.01
LSM5-201ENST00000223084 CAP1Q01518 475 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 CTDSPL2Q05D32 466 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 TMEM179Q6ZVK1 233 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 CD99L2Q8TCZ2 262 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 CCDC17Q96LX7 622 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 PARK7Q99497 189 aaKnown RBP15.12■□□□□ 0.01
LSM5-201ENST00000223084 IL25Q9H293 177 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 MKNK2Q9HBH9 465 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 INCENPQ9NQS7 918 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 ADGRA2Q96PE1 1338 aa15.12■□□□□ 0.01
LSM5-201ENST00000223084 FGAP02671 866 aa15.11■□□□□ 0.01
LSM5-201ENST00000223084 SP3Q02447 781 aa15.11■□□□□ 0.01
LSM5-201ENST00000223084 ALX1Q15699 326 aa15.11■□□□□ 0.01
LSM5-201ENST00000223084 USP17L2Q6R6M4 530 aa15.11■□□□□ 0.01
LSM5-201ENST00000223084 SIAH1Q8IUQ4 282 aa15.11■□□□□ 0.01
LSM5-201ENST00000223084 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.11■□□□□ 0.01
LSM5-201ENST00000223084 SLC45A1Q9Y2W3 748 aa15.11■□□□□ 0.01
LSM5-201ENST00000223084 TACC3Q9Y6A5 838 aa15.11■□□□□ 0.01
LSM5-201ENST00000223084 C17orf99Q6UX52 265 aa15.1■□□□□ 0.01
LSM5-201ENST00000223084 CTU1Q7Z7A3 348 aaKnown RBP15.1■□□□□ 0.01
LSM5-201ENST00000223084 MCOLN1Q9GZU1 580 aa15.1■□□□□ 0.01
LSM5-201ENST00000223084 KIAA1683Q9H0B3 1180 aa15.1■□□□□ 0.01
LSM5-201ENST00000223084 CHMLP26374 656 aa15.09■□□□□ 0.01
LSM5-201ENST00000223084 MFAP1P55081 439 aaKnown RBP15.09■□□□□ 0.01
LSM5-201ENST00000223084 HAND2P61296 217 aa15.09■□□□□ 0.01
LSM5-201ENST00000223084 ATP2B2Q01814 1243 aa15.09■□□□□ 0.01
LSM5-201ENST00000223084 ICA1Q05084 483 aa15.09■□□□□ 0.01
LSM5-201ENST00000223084 KIAA1755Q5JYT7 1200 aa15.09■□□□□ 0.01
LSM5-201ENST00000223084 ZNF444Q8N0Y2 327 aaPredicted RBP15.09■□□□□ 0.01
LSM5-201ENST00000223084 ERO1AQ96HE7 468 aa15.09■□□□□ 0.01
LSM5-201ENST00000223084 ARHGAP39Q9C0H5 1083 aa15.09■□□□□ 0.01
LSM5-201ENST00000223084 ASCC2Q9H1I8 757 aaPredicted RBP15.09■□□□□ 0.01
LSM5-201ENST00000223084 ZSWIM8A7E2V4 1837 aa15.08■□□□□ 0.01
LSM5-201ENST00000223084 SLC3A2P08195 630 aaKnown RBP15.08■□□□□ 0
LSM5-201ENST00000223084 EEF2P13639 858 aaKnown RBP15.08■□□□□ 0
LSM5-201ENST00000223084 OSBPP22059 807 aa15.08■□□□□ 0
LSM5-201ENST00000223084 USP14P54578 494 aa15.08■□□□□ 0
LSM5-201ENST00000223084 IRX3P78415 501 aaPredicted RBP15.08■□□□□ 0
LSM5-201ENST00000223084 PDE4BQ07343 736 aa15.08■□□□□ 0
LSM5-201ENST00000223084 FAM47AQ5JRC9 791 aa15.08■□□□□ 0
LSM5-201ENST00000223084 SMCR8Q8TEV9 937 aaPredicted RBP15.08■□□□□ 0
LSM5-201ENST00000223084 C12orf42Q96LP6 360 aa15.08■□□□□ 0
LSM5-201ENST00000223084 KANSL2Q9H9L4 492 aa15.08■□□□□ 0
LSM5-201ENST00000223084 PNMA3Q9UL41 463 aa15.08■□□□□ 0
LSM5-201ENST00000223084 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.08■□□□□ 0
LSM5-201ENST00000223084 TRIM17Q9Y577 477 aa15.08■□□□□ 0
LSM5-201ENST00000223084 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
LSM5-201ENST00000223084 PEX10O60683 326 aa15.07■□□□□ 0
LSM5-201ENST00000223084 BCRP11274 1271 aa15.07■□□□□ 0
LSM5-201ENST00000223084 VCAM1P19320 739 aa15.07■□□□□ 0
LSM5-201ENST00000223084 CTGFP29279 349 aa15.07■□□□□ 0
LSM5-201ENST00000223084 HOXA7P31268 230 aaPredicted RBP15.07■□□□□ 0
LSM5-201ENST00000223084 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 07e-10■□□□□ 11.1
LSM5-201ENST00000223084 OTOP1Q7RTM1 612 aa15.07■□□□□ 0
LSM5-201ENST00000223084 ANKRD13CQ8N6S4 541 aa15.07■□□□□ 0
LSM5-201ENST00000223084 P2RX7Q99572 595 aaKnown RBP15.07■□□□□ 0
LSM5-201ENST00000223084 ZNF287Q9HBT7 754 aa15.07■□□□□ 0
LSM5-201ENST00000223084 ARHGEF10LQ9HCE6 1279 aa15.07■□□□□ 0
LSM5-201ENST00000223084 PPP4R2Q9NY27 417 aa15.07■□□□□ 0
LSM5-201ENST00000223084 ANAPC4Q9UJX5 808 aa15.07■□□□□ 0
LSM5-201ENST00000223084 IGKV6D-41A0A0C4DH26 115 aa15.06■□□□□ 0
LSM5-201ENST00000223084 TSPY3P0CV98 308 aa15.06■□□□□ 0
LSM5-201ENST00000223084 TSPY8P0CW00 308 aa15.06■□□□□ 0
LSM5-201ENST00000223084 LACTBP83111 547 aaPredicted RBP15.06■□□□□ 0
LSM5-201ENST00000223084 TFAP4Q01664 338 aa15.06■□□□□ 0
LSM5-201ENST00000223084 MLLT1Q03111 559 aaPredicted RBP15.06■□□□□ 0
LSM5-201ENST00000223084 SPICE1Q8N0Z3 855 aa15.06■□□□□ 0
LSM5-201ENST00000223084 NBPF3Q9H094 633 aa15.06■□□□□ 0
LSM5-201ENST00000223084 RPAP3Q9H6T3 665 aaPredicted RBP15.06■□□□□ 0
LSM5-201ENST00000223084 EFCC1Q9HA90 598 aa15.06■□□□□ 0
LSM5-201ENST00000223084 TMX2Q9Y320 296 aa15.06■□□□□ 0
LSM5-201ENST00000223084 KIF22Q14807 665 aa15.05■□□□□ -0
LSM5-201ENST00000223084 RRP12Q5JTH9 1297 aaKnown RBP15.05■□□□□ -0
LSM5-201ENST00000223084 POTEEQ6S8J3 1075 aa15.05■□□□□ -0
LSM5-201ENST00000223084 CATSPERGQ6ZRH7 1159 aa15.05■□□□□ -0
LSM5-201ENST00000223084 TBC1D10CQ8IV04 446 aa15.05■□□□□ -0
LSM5-201ENST00000223084 NEDD1Q8NHV4 660 aa15.05■□□□□ -0
LSM5-201ENST00000223084 RUFY2Q8WXA3 655 aa15.05■□□□□ -0
LSM5-201ENST00000223084 ABHD8Q96I13 439 aa15.05■□□□□ -0
LSM5-201ENST00000223084 DSCC1Q9BVC3 393 aa15.05■□□□□ -0
LSM5-201ENST00000223084 TOMM22Q9NS69 142 aa15.05■□□□□ -0
LSM5-201ENST00000223084 FOXD4L1Q9NU39 408 aa15.05■□□□□ -0
LSM5-201ENST00000223084 CLIP2Q9UDT6 1046 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms