RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 ARHGEF9O43307 516 aa15.12■□□□□ 0.01
SIPA1L3-201ENST00000222345 RBM6P78332 1123 aaKnown RBP15.12■□□□□ 0.01
SIPA1L3-201ENST00000222345 VAT1LQ9HCJ6 419 aa15.12■□□□□ 0.01
SIPA1L3-201ENST00000222345 THAP12O43422 761 aa15.12■□□□□ 0.01
SIPA1L3-201ENST00000222345 LRRC2Q9BYS8 371 aa15.12■□□□□ 0.01
SIPA1L3-201ENST00000222345 RIC8AQ9NPQ8 531 aa15.12■□□□□ 0.01
SIPA1L3-201ENST00000222345 ZNF449Q6P9G9 518 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 SCYL3Q8IZE3 742 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 SLF1Q9BQI6 1058 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 KRT5P13647 590 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 RPGRQ92834 1020 aaKnown RBP15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 PPP1R13BQ96KQ4 1090 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 THUMPD2Q9BTF0 503 aaKnown RBP15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 KIFC3Q9BVG8 833 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 BAG5Q9UL15 447 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 RAD51AP2Q09MP3 1159 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 NMIQ13287 307 aaPredicted RBP15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 GDAP1L1Q96MZ0 367 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 MBIPQ9NS73 344 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 SSH2Q76I76 1423 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 ARHGEF18Q6ZSZ5 1173 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 PAG1Q9NWQ8 432 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 VWA3AA6NCI4 1184 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 LMNB1P20700 586 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 NOP14P78316 857 aaKnown RBP15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 C16orf87Q6PH81 154 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 TRIML1Q8N9V2 468 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 PDE4DQ08499 809 aa15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 RBM26Q5T8P6 1007 aaKnown RBP15.11■□□□□ 0.01
SIPA1L3-201ENST00000222345 KLHL30Q0D2K2 578 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 STX8Q9UNK0 236 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 PALM3A6NDB9 673 aaPredicted RBP15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 KCNA4P22459 653 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 BIRC2Q13490 618 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 SLFNL1Q499Z3 407 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 SYF2O95926 243 aaKnown RBP15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 CA8P35219 290 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 NCBP1Q09161 790 aaKnown RBP15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 APOBRQ0VD83 1088 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 BICC1Q9H694 974 aaKnown RBP15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 CCDC61Q9Y6R9 512 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 DEXIO95424 95 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 MPRIPQ6WCQ1 1025 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 PALM2Q8IXS6 379 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 TMEM63CQ9P1W3 806 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 CHMP2AO43633 222 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 VPS37BQ9H9H4 285 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 DAAM1Q9Y4D1 1078 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 BATF3Q9NR55 127 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 RNF14Q9UBS8 474 aa15.1■□□□□ 0.01
SIPA1L3-201ENST00000222345 WDR46O15213 610 aaKnown RBP15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 NUB1Q9Y5A7 615 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 SOS1Q07889 1333 aaPredicted RBP15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 SYNJ1O43426 1573 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 HNRNPH2P55795 449 aaKnown RBP15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 EIF3BP55884 814 aaKnown RBP15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 RASA3Q14644 834 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 HELLSQ9NRZ9 838 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 SERPINI1Q99574 410 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 KIAA1468Q9P260 1216 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 PASKQ96RG2 1323 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 CUL4BQ13620 913 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 HAUS3Q68CZ6 603 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 NELFBQ8WX92 580 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 SLC12A2P55011 1212 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 OGFOD1Q8N543 542 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 CABP5Q9NP86 173 aa15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 PACSIN2Q9UNF0 486 aaPredicted RBP15.09■□□□□ 0.01
SIPA1L3-201ENST00000222345 EIF3CLB5ME19 914 aaKnown RBP15.08■□□□□ 0.01
SIPA1L3-201ENST00000222345 NEK2P51955 445 aa15.08■□□□□ 0.01
SIPA1L3-201ENST00000222345 PPP2R5BQ15173 497 aa15.08■□□□□ 0.01
SIPA1L3-201ENST00000222345 KRT80Q6KB66 452 aa15.08■□□□□ 0.01
SIPA1L3-201ENST00000222345 EIF3CQ99613 913 aaKnown RBP15.08■□□□□ 0.01
SIPA1L3-201ENST00000222345 MRRFQ96E11 262 aaKnown RBP15.08■□□□□ 0.01
SIPA1L3-201ENST00000222345 WDR70Q9NW82 654 aa15.08■□□□□ 0.01
SIPA1L3-201ENST00000222345 TROQ12816 1431 aaPredicted RBP15.08■□□□□ 0
SIPA1L3-201ENST00000222345 ARHGAP10A1A4S6 786 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 DNM2P50570 870 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 RWDD2BP57060 319 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 SLC8A3P57103 927 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 ST5P78524 1137 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 GRM1Q13255 1194 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 TRMT1LQ7Z2T5 733 aaKnown RBP15.08■□□□□ 0
SIPA1L3-201ENST00000222345 TMEM87BQ96K49 555 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 CCDC138Q96M89 665 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 GLT8D2Q9H1C3 349 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.08■□□□□ 0
SIPA1L3-201ENST00000222345 OCA2Q04671 838 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 USHBP1Q8N6Y0 703 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 STRN3Q13033 797 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 MMEL1Q495T6 779 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 TEX2Q8IWB9 1127 aa15.08■□□□□ 0
SIPA1L3-201ENST00000222345 DCTN3O75935 186 aa15.07■□□□□ 0
SIPA1L3-201ENST00000222345 RSBN1LQ6PCB5 846 aaPredicted RBP15.07■□□□□ 0
SIPA1L3-201ENST00000222345 TEX13AQ9BXU3 409 aaPredicted RBP15.07■□□□□ 0
SIPA1L3-201ENST00000222345 PRG4Q92954 1404 aaPredicted RBP15.07■□□□□ 0
SIPA1L3-201ENST00000222345 ALDH1L1O75891 902 aa15.07■□□□□ 0
SIPA1L3-201ENST00000222345 ZBTB40Q9NUA8 1239 aa15.07■□□□□ 0
SIPA1L3-201ENST00000222345 LDHAL6AQ6ZMR3 332 aa15.07■□□□□ 0
SIPA1L3-201ENST00000222345 RASSF10A6NK89 507 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms