RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 SEC23AQ15436 765 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 ERCC6LQ2NKX8 1250 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 FAM177A1Q8N128 213 aaPredicted RBP17.45■□□□□ 0.38
TGFB1-201ENST00000221930 ENAHQ8N8S7 591 aaPredicted RBP17.45■□□□□ 0.38
TGFB1-201ENST00000221930 ESR2Q92731 530 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 CASP1P29466 404 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 KCNJ6P48051 423 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 EVX2Q03828 476 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 EPSTI1Q96J88 318 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 SRPRBQ9Y5M8 271 aaKnown RBP17.45■□□□□ 0.38
TGFB1-201ENST00000221930 SBF2Q86WG5 1849 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 AKAP17AQ02040 695 aaKnown RBP17.45■□□□□ 0.38
TGFB1-201ENST00000221930 ZNF622Q969S3 477 aaKnown RBP eCLIP17.45■□□□□ 0.38
TGFB1-201ENST00000221930 MED15Q96RN5 788 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 TMX1Q9H3N1 280 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 KCNG1Q9UIX4 513 aa17.45■□□□□ 0.38
TGFB1-201ENST00000221930 DDX41Q9UJV9 622 aaKnown RBP17.45■□□□□ 0.38
TGFB1-201ENST00000221930 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
TGFB1-201ENST00000221930 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
TGFB1-201ENST00000221930 FANCGO15287 622 aa17.44■□□□□ 0.38
TGFB1-201ENST00000221930 PLEKHA8P1O95397 391 aa17.44■□□□□ 0.38
TGFB1-201ENST00000221930 ADKP55263 362 aaKnown RBP17.44■□□□□ 0.38
TGFB1-201ENST00000221930 ETF1P62495 437 aaKnown RBP17.44■□□□□ 0.38
TGFB1-201ENST00000221930 L2HGDHQ9H9P8 463 aa17.44■□□□□ 0.38
TGFB1-201ENST00000221930 SAMSN1Q9NSI8 373 aaKnown RBP17.44■□□□□ 0.38
TGFB1-201ENST00000221930 TIAM2Q8IVF5 1701 aa17.44■□□□□ 0.38
TGFB1-201ENST00000221930 BAZ2BQ9UIF8 2168 aaKnown RBP17.44■□□□□ 0.38
TGFB1-201ENST00000221930 UBAP1LF5GYI3 381 aa17.44■□□□□ 0.38
TGFB1-201ENST00000221930 WNT7AO00755 349 aa17.44■□□□□ 0.38
TGFB1-201ENST00000221930 ACTN4O43707 911 aaKnown RBP17.44■□□□□ 0.38
TGFB1-201ENST00000221930 SARSP49591 514 aaKnown RBP17.44■□□□□ 0.38
TGFB1-201ENST00000221930 PKN1Q16512 942 aa17.44■□□□□ 0.38
TGFB1-201ENST00000221930 NOM1Q5C9Z4 860 aaKnown RBP17.44■□□□□ 0.38
TGFB1-201ENST00000221930 SMIM5Q71RC9 77 aa17.44■□□□□ 0.38
TGFB1-201ENST00000221930 DHX58Q96C10 678 aa17.44■□□□□ 0.38
TGFB1-201ENST00000221930 RIOK1Q9BRS2 568 aaKnown RBP17.44■□□□□ 0.38
TGFB1-201ENST00000221930 A0A087X0B3 334 aa17.43■□□□□ 0.38
TGFB1-201ENST00000221930 AFMP43652 599 aa17.43■□□□□ 0.38
TGFB1-201ENST00000221930 KCNQ4P56696 695 aa17.43■□□□□ 0.38
TGFB1-201ENST00000221930 ZNF397Q8NF99 534 aaPredicted RBP17.43■□□□□ 0.38
TGFB1-201ENST00000221930 ZSCAN10Q96SZ4 725 aaPredicted RBP17.43■□□□□ 0.38
TGFB1-201ENST00000221930 NUTM2BA6NNL0 878 aaPredicted RBP17.43■□□□□ 0.38
TGFB1-201ENST00000221930 NUTM2EB1AL46 878 aaPredicted RBP17.43■□□□□ 0.38
TGFB1-201ENST00000221930 MORC3Q14149 939 aa17.43■□□□□ 0.38
TGFB1-201ENST00000221930 DHX8Q14562 1220 aaKnown RBP17.43■□□□□ 0.38
TGFB1-201ENST00000221930 ERFEQ4G0M1 354 aa17.43■□□□□ 0.38
TGFB1-201ENST00000221930 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
TGFB1-201ENST00000221930 IFIT1BQ5T764 474 aaKnown RBP17.43■□□□□ 0.38
TGFB1-201ENST00000221930 NT5DC1Q5TFE4 455 aa17.43■□□□□ 0.38
TGFB1-201ENST00000221930 TMEM139Q8IV31 216 aa17.43■□□□□ 0.38
TGFB1-201ENST00000221930 NUTM2AQ8IVF1 878 aaPredicted RBP17.43■□□□□ 0.38
TGFB1-201ENST00000221930 RNF26Q9BY78 433 aaPredicted RBP17.43■□□□□ 0.38
TGFB1-201ENST00000221930 TRIM65Q6PJ69 517 aa17.42■□□□□ 0.38
TGFB1-201ENST00000221930 BICDL1Q6ZP65 573 aa17.42■□□□□ 0.38
TGFB1-201ENST00000221930 ZNF384Q8TF68 577 aa17.42■□□□□ 0.38
TGFB1-201ENST00000221930 CDC5LQ99459 802 aaKnown RBP17.42■□□□□ 0.38
TGFB1-201ENST00000221930 COL1A1P02452 1464 aaPredicted RBP17.42■□□□□ 0.38
TGFB1-201ENST00000221930 ZNF18P17022 549 aa17.42■□□□□ 0.38
TGFB1-201ENST00000221930 KLHL10Q6JEL2 608 aa17.42■□□□□ 0.38
TGFB1-201ENST00000221930 REXO1L1PQ8IX06 675 aa17.42■□□□□ 0.38
TGFB1-201ENST00000221930 MLKLQ8NB16 471 aa17.42■□□□□ 0.38
TGFB1-201ENST00000221930 CEP131Q9UPN4 1083 aa17.42■□□□□ 0.38
TGFB1-201ENST00000221930 TRIM75PA6NK02 468 aa17.41■□□□□ 0.38
TGFB1-201ENST00000221930 NMT2O60551 498 aa17.41■□□□□ 0.38
TGFB1-201ENST00000221930 FAM193AP78312 1265 aa17.41■□□□□ 0.38
TGFB1-201ENST00000221930 ANKRD18AQ8IVF6 992 aa17.41■□□□□ 0.38
TGFB1-201ENST00000221930 ZNF579Q8NAF0 562 aaKnown RBP17.41■□□□□ 0.38
TGFB1-201ENST00000221930 TAF1P21675 1872 aa17.41■□□□□ 0.38
TGFB1-201ENST00000221930 ZNF804BA4D1E1 1349 aa17.41■□□□□ 0.38
TGFB1-201ENST00000221930 MYH2Q9UKX2 1941 aa17.41■□□□□ 0.38
TGFB1-201ENST00000221930 KCNQ2O43526 872 aa17.41■□□□□ 0.38
TGFB1-201ENST00000221930 HMGB2P26583 209 aaKnown RBP17.41■□□□□ 0.38
TGFB1-201ENST00000221930 PIP4K2BP78356 416 aa17.41■□□□□ 0.38
TGFB1-201ENST00000221930 FUT2Q10981 343 aa17.41■□□□□ 0.38
TGFB1-201ENST00000221930 ELOA2Q8IYF1 753 aaPredicted RBP17.41■□□□□ 0.38
TGFB1-201ENST00000221930 ENOX1Q8TC92 643 aaKnown RBP17.41■□□□□ 0.38
TGFB1-201ENST00000221930 GNL3LQ9NVN8 582 aaKnown RBP17.41■□□□□ 0.38
TGFB1-201ENST00000221930 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.41■□□□□ 0.38
TGFB1-201ENST00000221930 KLRK1P26718 216 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 STX17P56962 302 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 TERF2Q15554 542 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 CATIPQ7Z7H3 387 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 SMYD4Q8IYR2 804 aaPredicted RBP17.4■□□□□ 0.38
TGFB1-201ENST00000221930 CNPY4Q8N129 248 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 STAMQ92783 540 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 BAG1Q99933 345 aaPredicted RBP17.4■□□□□ 0.38
TGFB1-201ENST00000221930 MTA3Q9BTC8 594 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 ANAPC4Q9UJX5 808 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 BAZ2AQ9UIF9 1905 aaKnown RBP17.4■□□□□ 0.38
TGFB1-201ENST00000221930 USP17L12C9JPN9 530 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 USP17L21D6R901 530 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 XBP1P17861 261 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 KRT2P35908 639 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 ZNF174Q15697 407 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 SLC4A8Q2Y0W8 1093 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 SPECC1LQ69YQ0 1117 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 TC2NQ8N9U0 490 aa17.4■□□□□ 0.38
TGFB1-201ENST00000221930 SYMPKQ92797 1274 aaKnown RBP17.4■□□□□ 0.38
TGFB1-201ENST00000221930 NGLY1Q96IV0 654 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms