RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 GPR25O00155 361 aa19.06■□□□□ 0.64
EBI3-201ENST00000221847 PDE4BQ07343 736 aa19.06■□□□□ 0.64
EBI3-201ENST00000221847 TREML2Q5T2D2 321 aa19.06■□□□□ 0.64
EBI3-201ENST00000221847 ZNF444Q8N0Y2 327 aaPredicted RBP19.06■□□□□ 0.64
EBI3-201ENST00000221847 PROCA1Q8NCQ7 364 aaPredicted RBP19.06■□□□□ 0.64
EBI3-201ENST00000221847 ZNF287Q9HBT7 754 aa19.06■□□□□ 0.64
EBI3-201ENST00000221847 ZFYVE28Q9HCC9 887 aa19.06■□□□□ 0.64
EBI3-201ENST00000221847 ANAPC4Q9UJX5 808 aa19.06■□□□□ 0.64
EBI3-201ENST00000221847 TACC3Q9Y6A5 838 aa19.06■□□□□ 0.64
EBI3-201ENST00000221847 ZMYM6O95789 1325 aa19.05■□□□□ 0.64
EBI3-201ENST00000221847 RAD50Q92878 1312 aa19.05■□□□□ 0.64
EBI3-201ENST00000221847 HAND2P61296 217 aa19.05■□□□□ 0.64
EBI3-201ENST00000221847 ZYXQ15942 572 aaKnown RBP19.05■□□□□ 0.64
EBI3-201ENST00000221847 SIAH1Q8IUQ4 282 aa19.05■□□□□ 0.64
EBI3-201ENST00000221847 FEZ1Q99689 392 aa19.05■□□□□ 0.64
EBI3-201ENST00000221847 DSCC1Q9BVC3 393 aa19.05■□□□□ 0.64
EBI3-201ENST00000221847 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.05■□□□□ 0.64
EBI3-201ENST00000221847 EMILIN3Q9NT22 766 aa19.05■□□□□ 0.64
EBI3-201ENST00000221847 TMOD4Q9NZQ9 345 aa19.05■□□□□ 0.64
EBI3-201ENST00000221847 AGTPBP1Q9UPW5 1226 aa19.05■□□□□ 0.64
EBI3-201ENST00000221847 CASP8AP2Q9UKL3 1982 aa19.04■□□□□ 0.64
EBI3-201ENST00000221847 A0A1W2PRG0 241 aa19.04■□□□□ 0.64
EBI3-201ENST00000221847 SGSM2O43147 1006 aa19.04■□□□□ 0.64
EBI3-201ENST00000221847 COL13A1Q5TAT6 717 aaPredicted RBP19.04■□□□□ 0.64
EBI3-201ENST00000221847 USP17L2Q6R6M4 530 aa19.04■□□□□ 0.64
EBI3-201ENST00000221847 KIAA1683Q9H0B3 1180 aa19.04■□□□□ 0.64
EBI3-201ENST00000221847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.04■□□□□ 0.64
EBI3-201ENST00000221847 CYP2C8P10632 490 aa19.03■□□□□ 0.64
EBI3-201ENST00000221847 ICA1Q05084 483 aa19.03■□□□□ 0.64
EBI3-201ENST00000221847 NOM1Q5C9Z4 860 aaKnown RBP19.03■□□□□ 0.64
EBI3-201ENST00000221847 FAM47AQ5JRC9 791 aa19.03■□□□□ 0.64
EBI3-201ENST00000221847 ZNF296Q8WUU4 475 aaPredicted RBP19.03■□□□□ 0.64
EBI3-201ENST00000221847 KANSL2Q9H9L4 492 aa19.03■□□□□ 0.64
EBI3-201ENST00000221847 SLC45A1Q9Y2W3 748 aa19.03■□□□□ 0.64
EBI3-201ENST00000221847 LOC285556D6RIA3 1793 aa19.02■□□□□ 0.64
EBI3-201ENST00000221847 TLR2O60603 784 aa19.02■□□□□ 0.64
EBI3-201ENST00000221847 EEF2P13639 858 aaKnown RBP19.02■□□□□ 0.64
EBI3-201ENST00000221847 USP14P54578 494 aa19.02■□□□□ 0.64
EBI3-201ENST00000221847 ATP2B2Q01814 1243 aa19.02■□□□□ 0.64
EBI3-201ENST00000221847 PTH1RQ03431 593 aa19.02■□□□□ 0.64
EBI3-201ENST00000221847 PARK7Q99497 189 aaKnown RBP19.02■□□□□ 0.64
EBI3-201ENST00000221847 NBPF3Q9H094 633 aa19.02■□□□□ 0.64
EBI3-201ENST00000221847 IGKV6D-41A0A0C4DH26 115 aa19.01■□□□□ 0.63
EBI3-201ENST00000221847 ZNF213O14771 459 aa19.01■□□□□ 0.63
EBI3-201ENST00000221847 FKTNO75072 461 aa19.01■□□□□ 0.63
EBI3-201ENST00000221847 FGRP09769 529 aa19.01■□□□□ 0.63
EBI3-201ENST00000221847 TFAP4Q01664 338 aa19.01■□□□□ 0.63
EBI3-201ENST00000221847 TBC1D10CQ8IV04 446 aa19.01■□□□□ 0.63
EBI3-201ENST00000221847 C12orf42Q96LP6 360 aa19.01■□□□□ 0.63
EBI3-201ENST00000221847 ARHGEF10LQ9HCE6 1279 aa19.01■□□□□ 0.63
EBI3-201ENST00000221847 CPA4Q9UI42 421 aa19.01■□□□□ 0.63
EBI3-201ENST00000221847 CTNNA3Q9UI47 895 aa19.01■□□□□ 0.63
EBI3-201ENST00000221847 ADGRA2Q96PE1 1338 aa19■□□□□ 0.63
EBI3-201ENST00000221847 ORC4O43929 436 aa19■□□□□ 0.63
EBI3-201ENST00000221847 TSPY3P0CV98 308 aa19■□□□□ 0.63
EBI3-201ENST00000221847 TSPY8P0CW00 308 aa19■□□□□ 0.63
EBI3-201ENST00000221847 PABPC4Q13310 644 aaKnown RBP eCLIP19■□□□□ 0.63
EBI3-201ENST00000221847 RRP12Q5JTH9 1297 aaKnown RBP19■□□□□ 0.63
EBI3-201ENST00000221847 AKNAD1Q5T1N1 836 aa19■□□□□ 0.63
EBI3-201ENST00000221847 NEDD1Q8NHV4 660 aa19■□□□□ 0.63
EBI3-201ENST00000221847 ESYT1Q9BSJ8 1104 aa19■□□□□ 0.63
EBI3-201ENST00000221847 ASCC2Q9H1I8 757 aaPredicted RBP19■□□□□ 0.63
EBI3-201ENST00000221847 TOMM22Q9NS69 142 aa19■□□□□ 0.63
EBI3-201ENST00000221847 TMX2Q9Y320 296 aa19■□□□□ 0.63
EBI3-201ENST00000221847 GREB1LQ9C091 1923 aaPredicted RBP19■□□□□ 0.63
EBI3-201ENST00000221847 RANBP6O60518 1105 aaKnown RBP18.99■□□□□ 0.63
EBI3-201ENST00000221847 OSBPP22059 807 aa18.99■□□□□ 0.63
EBI3-201ENST00000221847 HOXA7P31268 230 aaPredicted RBP18.99■□□□□ 0.63
EBI3-201ENST00000221847 SP3Q02447 781 aa18.99■□□□□ 0.63
EBI3-201ENST00000221847 KIAA1755Q5JYT7 1200 aa18.99■□□□□ 0.63
EBI3-201ENST00000221847 C17orf99Q6UX52 265 aa18.99■□□□□ 0.63
EBI3-201ENST00000221847 MFSD6Q6ZSS7 791 aa18.99■□□□□ 0.63
EBI3-201ENST00000221847 CEP95Q96GE4 821 aa18.99■□□□□ 0.63
EBI3-201ENST00000221847 NYAP2Q9P242 653 aa18.99■□□□□ 0.63
EBI3-201ENST00000221847 PNMA3Q9UL41 463 aa18.99■□□□□ 0.63
EBI3-201ENST00000221847 TSPY2A6NKD2 308 aa18.98■□□□□ 0.63
EBI3-201ENST00000221847 CDC45O75419 566 aa18.98■□□□□ 0.63
EBI3-201ENST00000221847 VCAM1P19320 739 aa18.98■□□□□ 0.63
EBI3-201ENST00000221847 IMMTQ16891 758 aaKnown RBP18.98■□□□□ 0.63
EBI3-201ENST00000221847 STAG1Q8WVM7 1258 aa18.98■□□□□ 0.63
EBI3-201ENST00000221847 P2RX7Q99572 595 aaKnown RBP18.98■□□□□ 0.63
EBI3-201ENST00000221847 SH2D4AQ9H788 454 aa18.98■□□□□ 0.63
EBI3-201ENST00000221847 MTMR4Q9NYA4 1195 aa18.98■□□□□ 0.63
EBI3-201ENST00000221847 CLIP2Q9UDT6 1046 aa18.98■□□□□ 0.63
EBI3-201ENST00000221847 PLIN4Q96Q06 1357 aa18.97■□□□□ 0.63
EBI3-201ENST00000221847 IRX3P78415 501 aaPredicted RBP18.97■□□□□ 0.63
EBI3-201ENST00000221847 KIAA1211Q6ZU35 1233 aa18.97■□□□□ 0.63
EBI3-201ENST00000221847 SPICE1Q8N0Z3 855 aa18.97■□□□□ 0.63
EBI3-201ENST00000221847 NKX2-3Q8TAU0 364 aa18.97■□□□□ 0.63
EBI3-201ENST00000221847 CD99L2Q8TCZ2 262 aa18.97■□□□□ 0.63
EBI3-201ENST00000221847 SMCR8Q8TEV9 937 aaPredicted RBP18.97■□□□□ 0.63
EBI3-201ENST00000221847 RNF41Q9H4P4 317 aaPredicted RBP18.97■□□□□ 0.63
EBI3-201ENST00000221847 RPAP3Q9H6T3 665 aaPredicted RBP18.97■□□□□ 0.63
EBI3-201ENST00000221847 VCPKMTQ9H867 229 aa18.97■□□□□ 0.63
EBI3-201ENST00000221847 U3KPZ7 1027 aaPredicted RBP18.97■□□□□ 0.63
EBI3-201ENST00000221847 USP17L15C9J2P7 530 aa18.96■□□□□ 0.63
EBI3-201ENST00000221847 USP17L13C9JLJ4 530 aa18.96■□□□□ 0.63
EBI3-201ENST00000221847 USP17L11C9JVI0 530 aa18.96■□□□□ 0.63
EBI3-201ENST00000221847 USP17L18D6R9N7 530 aa18.96■□□□□ 0.63
EBI3-201ENST00000221847 USP17L22D6RA61 530 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms