RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ZBED4O75132 1171 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 UBE2HP62256 183 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 ZNF174Q15697 407 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 KRT40Q6A162 431 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 PIK3AP1Q6ZUJ8 805 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 TXNRD3Q86VQ6 643 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 GTF3C6Q969F1 213 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 AS3MTQ9HBK9 375 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 DCP1AQ9NPI6 582 aaPredicted RBP10.68□□□□□ -0.7
CCDC113-201ENST00000219299 IVNS1ABPQ9Y6Y0 642 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 ABCC12Q96J65 1359 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 MED23Q9ULK4 1368 aa10.68□□□□□ -0.7
CCDC113-201ENST00000219299 SYKP43405 635 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 CASP7P55210 303 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 ZRSR2Q15696 482 aaKnown RBP10.67□□□□□ -0.7
CCDC113-201ENST00000219299 STRIP1Q5VSL9 837 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 ILDR1Q86SU0 546 aaPredicted RBP10.67□□□□□ -0.7
CCDC113-201ENST00000219299 PAGR1Q9BTK6 254 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 FAM107BQ9H098 131 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 SWAP70Q9UH65 585 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 MATR3P43243 847 aaKnown RBP eCLIP10.67□□□□□ -0.7
CCDC113-201ENST00000219299 CDK8P49336 464 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 FBXO33Q7Z6M2 555 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 FOXP4Q8IVH2 680 aaPredicted RBP10.67□□□□□ -0.7
CCDC113-201ENST00000219299 NSUN4Q96CB9 384 aaKnown RBP10.67□□□□□ -0.7
CCDC113-201ENST00000219299 KANSL2Q9H9L4 492 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 MROH7-TTC4A0A0A0MT08 1334 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 TMEM232C9JQI7 657 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 TNNT1P13805 278 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 KLHL40Q2TBA0 621 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 UVSSAQ2YD98 709 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 BRAPQ7Z569 592 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 PLCD4Q9BRC7 762 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 LZTS2Q9BRK4 669 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 LUC7LQ9NQ29 371 aaKnown RBP10.67□□□□□ -0.7
CCDC113-201ENST00000219299 GPHNQ9NQX3 736 aaPredicted RBP10.67□□□□□ -0.7
CCDC113-201ENST00000219299 POLLQ9UGP5 575 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 B4DLN1 442 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 ZSCAN12O43309 604 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 FLOT1O75955 427 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 LIG1P18858 919 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 CCDC181Q5TID7 509 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 APOA5Q6Q788 366 aa10.67□□□□□ -0.7
CCDC113-201ENST00000219299 SFPQP23246 707 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC113-201ENST00000219299 PDIA3P30101 505 aaKnown RBP10.66□□□□□ -0.7
CCDC113-201ENST00000219299 GADL1Q6ZQY3 521 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 ERMNQ8TAM6 284 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 UIMC1Q96RL1 719 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 DDX19AQ9NUU7 478 aaKnown RBP10.66□□□□□ -0.7
CCDC113-201ENST00000219299 XRCC6P12956 609 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC113-201ENST00000219299 AFMP43652 599 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 BCL2L12Q9HB09 334 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 CNOT7Q9UIV1 285 aaKnown RBP10.66□□□□□ -0.7
CCDC113-201ENST00000219299 NWD1Q149M9 1564 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 RGS12O14924 1447 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 SHTN1A0MZ66 631 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 TIGD1Q96MW7 591 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 TTLL1O95922 423 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 BCL9LQ86UU0 1499 aa10.66□□□□□ -0.7
CCDC113-201ENST00000219299 GH2P01242 217 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 ALAS1P13196 640 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 GSG1L2A8MUP6 293 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 SYCP1Q15431 976 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 RILPL1Q5EBL4 403 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 DTHD1Q6ZMT9 781 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 MICALL2Q8IY33 904 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 TDRD7Q8NHU6 1098 aaKnown RBP10.65□□□□□ -0.7
CCDC113-201ENST00000219299 MRPS27Q92552 414 aaKnown RBP10.65□□□□□ -0.7
CCDC113-201ENST00000219299 ZBTB21Q9ULJ3 1066 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 SCAF8Q9UPN6 1271 aaKnown RBP10.65□□□□□ -0.7
CCDC113-201ENST00000219299 PLIN2Q99541 437 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 DACT1Q9NYF0 836 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 USP25Q9UHP3 1055 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 DAGLAQ9Y4D2 1042 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 PFKFB2O60825 505 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 MYCLP12524 364 aaPredicted RBP10.65□□□□□ -0.7
CCDC113-201ENST00000219299 AMPD3Q01432 767 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 KRT79Q5XKE5 535 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 PPP4R3AQ6IN85 833 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 CRACR2AQ9BSW2 395 aa10.65□□□□□ -0.7
CCDC113-201ENST00000219299 DISP2A7MBM2 1401 aa10.65□□□□□ -0.71
CCDC113-201ENST00000219299 VWA3AA6NCI4 1184 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 SMCO2A6NFE2 343 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 ADCY7P51828 1080 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 TGFB2P61812 414 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 MKRN3Q13064 507 aaKnown RBP10.64□□□□□ -0.71
CCDC113-201ENST00000219299 BMS1Q14692 1282 aaKnown RBP10.64□□□□□ -0.71
CCDC113-201ENST00000219299 KCTD1Q719H9 257 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 USP17L2Q6R6M4 530 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 REXO1Q8N1G1 1221 aaKnown RBP10.64□□□□□ -0.71
CCDC113-201ENST00000219299 GTPBP4Q9BZE4 634 aaKnown RBP10.64□□□□□ -0.71
CCDC113-201ENST00000219299 ANO10Q9NW15 660 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 PSMD14O00487 310 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 SLC16A2P36021 539 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 STAT6P42226 847 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 GPKOWQ92917 476 aaPredicted RBP eCLIP10.64□□□□□ -0.71
CCDC113-201ENST00000219299 VTI1AQ96AJ9 217 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 DHX58Q96C10 678 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 CTAGE5O15320 804 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 GRIN3BO60391 1043 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms