RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 POTEEQ6S8J3 1075 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 LCORLQ8N3X6 602 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 ACER1Q8TDN7 264 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 SDR42E1Q8WUS8 393 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 TRIB2Q92519 343 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 C12orf42Q96LP6 360 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 BOLA2Q9H3K6 86 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 CHMP4BQ9H444 224 aaKnown RBP18.16■□□□□ 0.5
UPK3A-201ENST00000216211 CABP5Q9NP86 173 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 PAG1Q9NWQ8 432 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 MCM9Q9NXL9 1143 aa18.16■□□□□ 0.5
UPK3A-201ENST00000216211 GUCY1A2P33402 732 aa18.15■□□□□ 0.5
UPK3A-201ENST00000216211 USP14P54578 494 aa18.15■□□□□ 0.5
UPK3A-201ENST00000216211 GABPAQ06546 454 aa18.15■□□□□ 0.5
UPK3A-201ENST00000216211 SLFNL1Q499Z3 407 aa18.15■□□□□ 0.5
UPK3A-201ENST00000216211 CHRDL2Q6WN34 429 aa18.15■□□□□ 0.5
UPK3A-201ENST00000216211 GTF3C2Q8WUA4 911 aaPredicted RBP18.15■□□□□ 0.5
UPK3A-201ENST00000216211 NUDT12Q9BQG2 462 aa18.15■□□□□ 0.5
UPK3A-201ENST00000216211 CRISPLD2Q9H0B8 497 aa18.15■□□□□ 0.5
UPK3A-201ENST00000216211 PORCNQ9H237 461 aa18.15■□□□□ 0.5
UPK3A-201ENST00000216211 USP17L15C9J2P7 530 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 USP17L13C9JLJ4 530 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 USP17L11C9JVI0 530 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 USP17L18D6R9N7 530 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 USP17L22D6RA61 530 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 USP17L17D6RBQ6 530 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 USP17L19D6RCP7 530 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 USP17L20D6RJB6 530 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 CYP2D6P10635 497 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 MAPK4P31152 587 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 FXR1P51114 621 aaKnown RBP eCLIP18.14■□□□□ 0.49
UPK3A-201ENST00000216211 USP17L24Q0WX57 530 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 SEPT2Q15019 361 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 KIAA1683Q9H0B3 1180 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 ARMT1Q9H993 441 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 DCP1AQ9NPI6 582 aaPredicted RBP18.14■□□□□ 0.49
UPK3A-201ENST00000216211 RPTORQ8N122 1335 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 FRMPD3Q5JV73 1810 aa18.14■□□□□ 0.49
UPK3A-201ENST00000216211 CNMDO75829 334 aa18.13■□□□□ 0.49
UPK3A-201ENST00000216211 CAPN2P17655 700 aa18.13■□□□□ 0.49
UPK3A-201ENST00000216211 ATP5JP18859 108 aa18.13■□□□□ 0.49
UPK3A-201ENST00000216211 VCAM1P19320 739 aa18.13■□□□□ 0.49
UPK3A-201ENST00000216211 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
UPK3A-201ENST00000216211 CATSPERGQ6ZRH7 1159 aa18.13■□□□□ 0.49
UPK3A-201ENST00000216211 GPR142Q7Z601 462 aa18.13■□□□□ 0.49
UPK3A-201ENST00000216211 CCAR1Q8IX12 1150 aaKnown RBP18.13■□□□□ 0.49
UPK3A-201ENST00000216211 DIS3LQ8TF46 1054 aaKnown RBP18.13■□□□□ 0.49
UPK3A-201ENST00000216211 SOCS4Q8WXH5 440 aa18.13■□□□□ 0.49
UPK3A-201ENST00000216211 PAWRQ96IZ0 340 aaKnown RBP18.13■□□□□ 0.49
UPK3A-201ENST00000216211 HMX1Q9NP08 348 aaPredicted RBP18.13■□□□□ 0.49
UPK3A-201ENST00000216211 RLFQ13129 1914 aa18.12■□□□□ 0.49
UPK3A-201ENST00000216211 MPHOSPH10O00566 681 aaKnown RBP18.12■□□□□ 0.49
UPK3A-201ENST00000216211 PRKAB2O43741 272 aa18.12■□□□□ 0.49
UPK3A-201ENST00000216211 CHGBP05060 677 aa18.12■□□□□ 0.49
UPK3A-201ENST00000216211 ADD2P35612 726 aa18.12■□□□□ 0.49
UPK3A-201ENST00000216211 PLEKHH3Q7Z736 793 aa18.12■□□□□ 0.49
UPK3A-201ENST00000216211 SLC44A5Q8NCS7 719 aa18.12■□□□□ 0.49
UPK3A-201ENST00000216211 HAUS7Q99871 368 aa18.12■□□□□ 0.49
UPK3A-201ENST00000216211 RPAP3Q9H6T3 665 aaPredicted RBP18.12■□□□□ 0.49
UPK3A-201ENST00000216211 RABGAP1Q9Y3P9 1069 aa18.12■□□□□ 0.49
UPK3A-201ENST00000216211 NR2E3Q9Y5X4 410 aa18.12■□□□□ 0.49
UPK3A-201ENST00000216211 PARP14Q460N5 1801 aa18.12■□□□□ 0.49
UPK3A-201ENST00000216211 TRIOBPQ9H2D6 2365 aa18.11■□□□□ 0.49
UPK3A-201ENST00000216211 SMARCA5O60264 1052 aaPredicted RBP18.11■□□□□ 0.49
UPK3A-201ENST00000216211 MBD4O95243 580 aa18.11■□□□□ 0.49
UPK3A-201ENST00000216211 XRCC5P13010 732 aaKnown RBP18.11■□□□□ 0.49
UPK3A-201ENST00000216211 USP6NLQ92738 828 aa18.11■□□□□ 0.49
UPK3A-201ENST00000216211 DYNLL2Q96FJ2 89 aa18.11■□□□□ 0.49
UPK3A-201ENST00000216211 LRRCC1Q9C099 1032 aa18.11■□□□□ 0.49
UPK3A-201ENST00000216211 CWC22Q9HCG8 908 aaKnown RBP18.11■□□□□ 0.49
UPK3A-201ENST00000216211 A0A0G2JMZ2 1700 aa18.1■□□□□ 0.49
UPK3A-201ENST00000216211 A0A1W2PRG0 241 aa18.1■□□□□ 0.49
UPK3A-201ENST00000216211 EVI5O60447 810 aa18.1■□□□□ 0.49
UPK3A-201ENST00000216211 PRKAR2AP13861 404 aaKnown RBP18.1■□□□□ 0.49
UPK3A-201ENST00000216211 RGS2P41220 211 aa18.1■□□□□ 0.49
UPK3A-201ENST00000216211 CCL14Q16627 93 aa18.1■□□□□ 0.49
UPK3A-201ENST00000216211 MORN1Q5T089 497 aa18.1■□□□□ 0.49
UPK3A-201ENST00000216211 MAP3K21Q5TCX8 1036 aa18.1■□□□□ 0.49
UPK3A-201ENST00000216211 NECAB2Q7Z6G3 386 aa18.1■□□□□ 0.49
UPK3A-201ENST00000216211 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.1■□□□□ 0.49
UPK3A-201ENST00000216211 BTBD7Q9P203 1132 aa18.1■□□□□ 0.49
UPK3A-201ENST00000216211 RBM27Q9P2N5 1060 aaKnown RBP18.1■□□□□ 0.49
UPK3A-201ENST00000216211 SPDYE16A6NNV3 312 aaPredicted RBP18.09■□□□□ 0.49
UPK3A-201ENST00000216211 ZKSCAN1P17029 563 aaPredicted RBP18.09■□□□□ 0.49
UPK3A-201ENST00000216211 CCNA1P78396 465 aa18.09■□□□□ 0.49
UPK3A-201ENST00000216211 CACNB2Q08289 660 aaPredicted RBP18.09■□□□□ 0.49
UPK3A-201ENST00000216211 WDR78Q5VTH9 848 aa18.09■□□□□ 0.49
UPK3A-201ENST00000216211 TRMT44Q8IYL2 757 aaKnown RBP18.09■□□□□ 0.49
UPK3A-201ENST00000216211 ANKLE1Q8NAG6 615 aa18.09■□□□□ 0.49
UPK3A-201ENST00000216211 ATP8A2Q9NTI2 1148 aa18.09■□□□□ 0.49
UPK3A-201ENST00000216211 SWAP70Q9UH65 585 aa18.09■□□□□ 0.49
UPK3A-201ENST00000216211 RANBP2P49792 3224 aaKnown RBP18.09■□□□□ 0.49
UPK3A-201ENST00000216211 COL11A1P12107 1806 aaPredicted RBP18.08■□□□□ 0.48
UPK3A-201ENST00000216211 CYP2D7A0A087X1C5 515 aa18.08■□□□□ 0.48
UPK3A-201ENST00000216211 SMIM22K7EJ46 135 aa18.08■□□□□ 0.48
UPK3A-201ENST00000216211 LBX2Q6XYB7 198 aa18.08■□□□□ 0.48
UPK3A-201ENST00000216211 APBA2Q99767 749 aa18.08■□□□□ 0.48
UPK3A-201ENST00000216211 SZT2Q5T011 3432 aa18.08■□□□□ 0.48
UPK3A-201ENST00000216211 AKR1B1P15121 316 aa18.07■□□□□ 0.48
UPK3A-201ENST00000216211 MNX1P50219 401 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms