RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 ZNF444Q8N0Y2 327 aaPredicted RBP16.95■□□□□ 0.3
CBX6-201ENST00000216083 PIM2Q9P1W9 311 aa16.95■□□□□ 0.3
CBX6-201ENST00000216083 SUGT1Q9Y2Z0 365 aa16.95■□□□□ 0.3
CBX6-201ENST00000216083 KIF3AQ9Y496 699 aa16.95■□□□□ 0.3
CBX6-201ENST00000216083 TSPY3P0CV98 308 aa16.94■□□□□ 0.3
CBX6-201ENST00000216083 TSPY8P0CW00 308 aa16.94■□□□□ 0.3
CBX6-201ENST00000216083 RASA1P20936 1047 aa16.94■□□□□ 0.3
CBX6-201ENST00000216083 CC2D2BQ6DHV5 1058 aa16.94■□□□□ 0.3
CBX6-201ENST00000216083 SPC24Q8NBT2 197 aa16.94■□□□□ 0.3
CBX6-201ENST00000216083 KRT85P78386 507 aa16.94■□□□□ 0.3
CBX6-201ENST00000216083 CPLX2Q6PUV4 134 aaKnown RBP16.94■□□□□ 0.3
CBX6-201ENST00000216083 TMTC2Q8N394 836 aa16.94■□□□□ 0.3
CBX6-201ENST00000216083 FBXO18Q8NFZ0 1043 aa16.94■□□□□ 0.3
CBX6-201ENST00000216083 STX8Q9UNK0 236 aa16.94■□□□□ 0.3
CBX6-201ENST00000216083 MYH1P12882 1939 aa16.94■□□□□ 0.3
CBX6-201ENST00000216083 FAM196BA6NMK8 535 aa16.93■□□□□ 0.3
CBX6-201ENST00000216083 KIF28PB7ZC32 967 aa16.93■□□□□ 0.3
CBX6-201ENST00000216083 TROAPQ12815 778 aa16.93■□□□□ 0.3
CBX6-201ENST00000216083 ZNF771Q7L3S4 317 aaPredicted RBP16.93■□□□□ 0.3
CBX6-201ENST00000216083 CATIPQ7Z7H3 387 aa16.93■□□□□ 0.3
CBX6-201ENST00000216083 PCP11498 1178 aaKnown RBP16.93■□□□□ 0.3
CBX6-201ENST00000216083 CLEC10AQ8IUN9 316 aa16.93■□□□□ 0.3
CBX6-201ENST00000216083 RTKN2Q8IZC4 609 aa16.93■□□□□ 0.3
CBX6-201ENST00000216083 PDCL2Q8N4E4 241 aa16.93■□□□□ 0.3
CBX6-201ENST00000216083 HHIPL2Q6UWX4 724 aa16.93■□□□□ 0.3
CBX6-201ENST00000216083 SUPT20HQ8NEM7 779 aa16.93■□□□□ 0.3
CBX6-201ENST00000216083 BCS1LQ9Y276 419 aa16.93■□□□□ 0.3
CBX6-201ENST00000216083 PSMD14O00487 310 aa16.92■□□□□ 0.3
CBX6-201ENST00000216083 SSRP1Q08945 709 aaKnown RBP16.92■□□□□ 0.3
CBX6-201ENST00000216083 TDRD3Q9H7E2 651 aaKnown RBP16.92■□□□□ 0.3
CBX6-201ENST00000216083 CDKL5O76039 1030 aa16.92■□□□□ 0.3
CBX6-201ENST00000216083 UTP14CQ5TAP6 766 aaKnown RBP16.92■□□□□ 0.3
CBX6-201ENST00000216083 KCNJ14Q9UNX9 436 aa16.92■□□□□ 0.3
CBX6-201ENST00000216083 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
CBX6-201ENST00000216083 IFNAR1P17181 557 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 DALRD3Q5D0E6 543 aaKnown RBP16.91■□□□□ 0.3
CBX6-201ENST00000216083 C16orf86Q6ZW13 317 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 NBPF11Q86T75 865 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 ROBO3Q96MS0 1386 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 ADCY5O95622 1261 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 KRT40Q6A162 431 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 CRACR2BQ8N4Y2 399 aaPredicted RBP16.91■□□□□ 0.3
CBX6-201ENST00000216083 PRMT6Q96LA8 375 aaPredicted RBP16.91■□□□□ 0.3
CBX6-201ENST00000216083 ZDHHC15Q96MV8 337 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 USP28Q96RU2 1077 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 MTA3Q9BTC8 594 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 DDX60LQ5H9U9 1706 aaKnown RBP16.91■□□□□ 0.3
CBX6-201ENST00000216083 EIF6P56537 245 aaKnown RBP16.91■□□□□ 0.3
CBX6-201ENST00000216083 CERS3Q8IU89 383 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 TMEM87AQ8NBN3 555 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 SPATA32Q96LK8 384 aa16.91■□□□□ 0.3
CBX6-201ENST00000216083 OSBPL5Q9H0X9 879 aaPredicted RBP16.91■□□□□ 0.3
CBX6-201ENST00000216083 FMNL1O95466 1100 aaPredicted RBP16.9■□□□□ 0.3
CBX6-201ENST00000216083 TGFB2P61812 414 aa16.9■□□□□ 0.3
CBX6-201ENST00000216083 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
CBX6-201ENST00000216083 LEO1Q8WVC0 666 aaPredicted RBP16.9■□□□□ 0.3
CBX6-201ENST00000216083 PSMD1Q99460 953 aa16.9■□□□□ 0.3
CBX6-201ENST00000216083 NAA30Q147X3 362 aaPredicted RBP16.9■□□□□ 0.3
CBX6-201ENST00000216083 SHROOM1Q2M3G4 852 aaPredicted RBP16.9■□□□□ 0.3
CBX6-201ENST00000216083 CFAP100Q494V2 611 aa16.9■□□□□ 0.3
CBX6-201ENST00000216083 ZSCAN16Q9H4T2 348 aaPredicted RBP16.9■□□□□ 0.3
CBX6-201ENST00000216083 CPVLQ9H3G5 476 aa16.89■□□□□ 0.3
CBX6-201ENST00000216083 KAT14Q9H8E8 782 aa16.89■□□□□ 0.3
CBX6-201ENST00000216083 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.3
CBX6-201ENST00000216083 V9GY48 417 aaPredicted RBP16.89■□□□□ 0.3
CBX6-201ENST00000216083 VEGFAP15692 232 aaPredicted RBP16.89■□□□□ 0.29
CBX6-201ENST00000216083 ZSCAN29Q8IWY8 852 aaPredicted RBP16.89■□□□□ 0.29
CBX6-201ENST00000216083 STAG2Q8N3U4 1231 aa16.89■□□□□ 0.29
CBX6-201ENST00000216083 PNMA1Q8ND90 353 aa16.89■□□□□ 0.29
CBX6-201ENST00000216083 SGIP1Q9BQI5 828 aa16.89■□□□□ 0.29
CBX6-201ENST00000216083 FAM198AQ9UFP1 575 aa16.89■□□□□ 0.29
CBX6-201ENST00000216083 CLRN2A0PK11 232 aa16.89■□□□□ 0.29
CBX6-201ENST00000216083 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
CBX6-201ENST00000216083 RIOK3O14730 519 aaKnown RBP16.89■□□□□ 0.29
CBX6-201ENST00000216083 SRBD1Q8N5C6 995 aaKnown RBP16.89■□□□□ 0.29
CBX6-201ENST00000216083 SHISA4Q96DD7 197 aa16.89■□□□□ 0.29
CBX6-201ENST00000216083 CEP95Q96GE4 821 aa16.89■□□□□ 0.29
CBX6-201ENST00000216083 ZNF646O15015 1829 aaPredicted RBP16.88■□□□□ 0.29
CBX6-201ENST00000216083 SHTN1A0MZ66 631 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 GOLGA8HP0CJ92 632 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 AKR1B1P15121 316 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 PTGER2P43116 358 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 KIF23Q02241 960 aaPredicted RBP16.88■□□□□ 0.29
CBX6-201ENST00000216083 TRIM22Q8IYM9 498 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 TMEM47Q9BQJ4 181 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 ECM29Q5VYK3 1845 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 CCDC196A0A1B0GTZ2 297 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 MBD3O95983 291 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 UBE2HP62256 183 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 FUT2Q10981 343 aa16.88■□□□□ 0.29
CBX6-201ENST00000216083 NFKBIEO00221 500 aa16.87■□□□□ 0.29
CBX6-201ENST00000216083 RSBN1LQ6PCB5 846 aaPredicted RBP16.87■□□□□ 0.29
CBX6-201ENST00000216083 SH3BP5LQ7L8J4 393 aa16.87■□□□□ 0.29
CBX6-201ENST00000216083 CTCFLQ8NI51 663 aaPredicted RBP16.87■□□□□ 0.29
CBX6-201ENST00000216083 PGBD1Q96JS3 809 aa16.87■□□□□ 0.29
CBX6-201ENST00000216083 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.87■□□□□ 0.29
CBX6-201ENST00000216083 VPS54Q9P1Q0 977 aa16.87■□□□□ 0.29
CBX6-201ENST00000216083 SERPINB13Q9UIV8 391 aa16.87■□□□□ 0.29
CBX6-201ENST00000216083 KIF13BQ9NQT8 1826 aa16.87■□□□□ 0.29
CBX6-201ENST00000216083 NID2Q14112 1375 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms