RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 CCT2P78371 535 aaKnown RBP18.38■□□□□ 0.53
TMED1-201ENST00000214869 HMGN5P82970 282 aaKnown RBP18.38■□□□□ 0.53
TMED1-201ENST00000214869 CERKLQ49MI3 558 aaPredicted RBP18.38■□□□□ 0.53
TMED1-201ENST00000214869 CEP95Q96GE4 821 aa18.38■□□□□ 0.53
TMED1-201ENST00000214869 NCOA5Q9HCD5 579 aaKnown RBP18.38■□□□□ 0.53
TMED1-201ENST00000214869 MTMR4Q9NYA4 1195 aa18.38■□□□□ 0.53
TMED1-201ENST00000214869 NAP1L2Q9ULW6 460 aaPredicted RBP18.38■□□□□ 0.53
TMED1-201ENST00000214869 MYH6P13533 1939 aa18.37■□□□□ 0.53
TMED1-201ENST00000214869 CCDC196A0A1B0GTZ2 297 aa18.37■□□□□ 0.53
TMED1-201ENST00000214869 GOLGA8AA7E2F4 631 aa18.37■□□□□ 0.53
TMED1-201ENST00000214869 TOP1P11387 765 aaKnown RBP18.37■□□□□ 0.53
TMED1-201ENST00000214869 NUCB2P80303 420 aa18.37■□□□□ 0.53
TMED1-201ENST00000214869 ANGEL2Q5VTE6 544 aaKnown RBP18.37■□□□□ 0.53
TMED1-201ENST00000214869 USP50Q70EL3 339 aaPredicted RBP18.37■□□□□ 0.53
TMED1-201ENST00000214869 MICU3Q86XE3 530 aa18.37■□□□□ 0.53
TMED1-201ENST00000214869 FANCBQ8NB91 859 aa18.37■□□□□ 0.53
TMED1-201ENST00000214869 DEFB129Q9H1M3 183 aa18.37■□□□□ 0.53
TMED1-201ENST00000214869 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.37■□□□□ 0.53
TMED1-201ENST00000214869 ATAD5Q96QE3 1844 aa18.37■□□□□ 0.53
TMED1-201ENST00000214869 GJB2P29033 226 aa18.36■□□□□ 0.53
TMED1-201ENST00000214869 NTRK3Q16288 839 aa18.36■□□□□ 0.53
TMED1-201ENST00000214869 RTN1Q16799 776 aa18.36■□□□□ 0.53
TMED1-201ENST00000214869 TMEM179Q6ZVK1 233 aa18.36■□□□□ 0.53
TMED1-201ENST00000214869 CDAN1Q8IWY9 1227 aa18.36■□□□□ 0.53
TMED1-201ENST00000214869 ZC3H15Q8WU90 426 aaKnown RBP18.36■□□□□ 0.53
TMED1-201ENST00000214869 HOOK2Q96ED9 719 aa18.36■□□□□ 0.53
TMED1-201ENST00000214869 TMEM47Q9BQJ4 181 aa18.36■□□□□ 0.53
TMED1-201ENST00000214869 KAT14Q9H8E8 782 aa18.36■□□□□ 0.53
TMED1-201ENST00000214869 FAM196BA6NMK8 535 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 CDKL5O76039 1030 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 SLURP2P0DP57 97 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 IFNAR1P17181 557 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 PDCP20941 246 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 CDC27P30260 824 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 CPLX2Q6PUV4 134 aaKnown RBP18.35■□□□□ 0.53
TMED1-201ENST00000214869 PNMA1Q8ND90 353 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 MKL1Q969V6 931 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 KANSL2Q9H9L4 492 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 GINM1Q9NU53 330 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 RBM28Q9NW13 759 aaKnown RBP18.35■□□□□ 0.53
TMED1-201ENST00000214869 GGA3Q9NZ52 723 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 NYAP2Q9P242 653 aa18.35■□□□□ 0.53
TMED1-201ENST00000214869 PTPDC1A2A3K4 754 aa18.34■□□□□ 0.53
TMED1-201ENST00000214869 CPLX1O14810 134 aa18.34■□□□□ 0.53
TMED1-201ENST00000214869 JAK2O60674 1132 aa18.34■□□□□ 0.53
TMED1-201ENST00000214869 TTLL1O95922 423 aa18.34■□□□□ 0.53
TMED1-201ENST00000214869 ADD1P35611 737 aaKnown RBP18.34■□□□□ 0.53
TMED1-201ENST00000214869 RRP1BQ14684 758 aaKnown RBP18.34■□□□□ 0.53
TMED1-201ENST00000214869 RAB3GAP1Q15042 981 aa18.34■□□□□ 0.53
TMED1-201ENST00000214869 ABCB5Q2M3G0 1257 aa18.34■□□□□ 0.53
TMED1-201ENST00000214869 MYL10Q9BUA6 226 aa18.34■□□□□ 0.53
TMED1-201ENST00000214869 SYNPO2Q9UMS6 1093 aa18.34■□□□□ 0.53
TMED1-201ENST00000214869 STX8Q9UNK0 236 aa18.34■□□□□ 0.53
TMED1-201ENST00000214869 KIF3AQ9Y496 699 aa18.34■□□□□ 0.53
TMED1-201ENST00000214869 STK36Q9NRP7 1315 aa18.33■□□□□ 0.53
TMED1-201ENST00000214869 IQCA1LA6NCM1 817 aa18.33■□□□□ 0.53
TMED1-201ENST00000214869 RXRAP19793 462 aa18.33■□□□□ 0.53
TMED1-201ENST00000214869 GUCY1A2P33402 732 aa18.33■□□□□ 0.53
TMED1-201ENST00000214869 EPHX2P34913 555 aa18.33■□□□□ 0.53
TMED1-201ENST00000214869 GRM4Q14833 912 aa18.33■□□□□ 0.53
TMED1-201ENST00000214869 RAB11FIP4Q86YS3 637 aa18.33■□□□□ 0.53
TMED1-201ENST00000214869 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
TMED1-201ENST00000214869 POTECB2RU33 542 aa18.32■□□□□ 0.52
TMED1-201ENST00000214869 BRD1O95696 1058 aa18.32■□□□□ 0.52
TMED1-201ENST00000214869 FDPSP14324 419 aaKnown RBP18.32■□□□□ 0.52
TMED1-201ENST00000214869 SYT1P21579 422 aa18.32■□□□□ 0.52
TMED1-201ENST00000214869 KIF5BP33176 963 aa18.32■□□□□ 0.52
TMED1-201ENST00000214869 FUT2Q10981 343 aa18.32■□□□□ 0.52
TMED1-201ENST00000214869 NUP133Q8WUM0 1156 aa18.32■□□□□ 0.52
TMED1-201ENST00000214869 CABP5Q9NP86 173 aa18.32■□□□□ 0.52
TMED1-201ENST00000214869 DOCK1Q14185 1865 aa18.32■□□□□ 0.52
TMED1-201ENST00000214869 MPHOSPH10O00566 681 aaKnown RBP18.31■□□□□ 0.52
TMED1-201ENST00000214869 SNHG28P0DPA3 235 aa18.31■□□□□ 0.52
TMED1-201ENST00000214869 CAP2P40123 477 aa18.31■□□□□ 0.52
TMED1-201ENST00000214869 JAG1P78504 1218 aa18.31■□□□□ 0.52
TMED1-201ENST00000214869 NBPF12Q5TAG4 269 aaPredicted RBP18.31■□□□□ 0.52
TMED1-201ENST00000214869 DCAF15Q66K64 600 aa18.31■□□□□ 0.52
TMED1-201ENST00000214869 TMTC3Q6ZXV5 915 aa18.31■□□□□ 0.52
TMED1-201ENST00000214869 SIAH1Q8IUQ4 282 aa18.31■□□□□ 0.52
TMED1-201ENST00000214869 CTCFLQ8NI51 663 aaPredicted RBP18.31■□□□□ 0.52
TMED1-201ENST00000214869 TAF1DQ9H5J8 278 aaPredicted RBP18.31■□□□□ 0.52
TMED1-201ENST00000214869 ZNF112Q9UJU3 913 aa18.31■□□□□ 0.52
TMED1-201ENST00000214869 ZDHHC9Q9Y397 364 aa18.31■□□□□ 0.52
TMED1-201ENST00000214869 WDR33Q9C0J8 1336 aaKnown RBP18.31■□□□□ 0.52
TMED1-201ENST00000214869 PALM3A6NDB9 673 aaPredicted RBP18.3■□□□□ 0.52
TMED1-201ENST00000214869 STX6O43752 255 aa18.3■□□□□ 0.52
TMED1-201ENST00000214869 FMNL1O95466 1100 aaPredicted RBP18.3■□□□□ 0.52
TMED1-201ENST00000214869 GH2P01242 217 aa18.3■□□□□ 0.52
TMED1-201ENST00000214869 GNAQP50148 359 aa18.3■□□□□ 0.52
TMED1-201ENST00000214869 SEPT2Q15019 361 aa18.3■□□□□ 0.52
TMED1-201ENST00000214869 SUPT20HL1Q3ZLR7 823 aa18.3■□□□□ 0.52
TMED1-201ENST00000214869 LARP1BQ659C4 914 aaKnown RBP18.3■□□□□ 0.52
TMED1-201ENST00000214869 NBPF11Q86T75 865 aa18.3■□□□□ 0.52
TMED1-201ENST00000214869 CCDC144CPQ8IYA2 1237 aa18.3■□□□□ 0.52
TMED1-201ENST00000214869 ZNF784Q8NCA9 323 aaPredicted RBP18.3■□□□□ 0.52
TMED1-201ENST00000214869 DCPSQ96C86 337 aaKnown RBP18.3■□□□□ 0.52
TMED1-201ENST00000214869 LZTS2Q9BRK4 669 aa18.3■□□□□ 0.52
TMED1-201ENST00000214869 ORC3Q9UBD5 711 aaPredicted RBP18.3■□□□□ 0.52
TMED1-201ENST00000214869 CLIP2Q9UDT6 1046 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms