RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 MYL10Q9BUA6 226 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 GGA1Q9UJY5 639 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 ADAM21Q9UKJ8 722 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 B4E1Z4 1266 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 PFKFB2O60825 505 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 ALDH1B1P30837 517 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 SEPT7Q16181 437 aaKnown RBP12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 GPIHBP1Q8IV16 184 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 CRACR2BQ8N4Y2 399 aaPredicted RBP12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 MYCBPQ99417 103 aaPredicted RBP12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 SEC31BQ9NQW1 1179 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 HELLSQ9NRZ9 838 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 TAB2Q9NYJ8 693 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 JRKLQ9Y4A0 524 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 MEGF6O75095 1541 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 CYP26C1Q6V0L0 522 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 FAM114A1Q8IWE2 563 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 CNKSR1Q969H4 720 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 EXOC4Q96A65 974 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 TSG101Q99816 390 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 ZKSCAN3Q9BRR0 538 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 FAM204AQ9H8W3 233 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 NARFQ9UHQ1 456 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 CTNND2Q9UQB3 1225 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 PCDHA5Q9Y5H7 936 aa12.96□□□□□ -0.33
DNMT3B-201ENST00000201963 CCDC151A5D8V7 595 aa12.96□□□□□ -0.34
DNMT3B-201ENST00000201963 VWA3AA6NCI4 1184 aa12.96□□□□□ -0.34
DNMT3B-201ENST00000201963 NEURL1BA8MQ27 555 aa12.96□□□□□ -0.34
DNMT3B-201ENST00000201963 FGFR1OPO95684 399 aaKnown RBP12.96□□□□□ -0.34
DNMT3B-201ENST00000201963 ARID5AQ03989 594 aa12.96□□□□□ -0.34
DNMT3B-201ENST00000201963 SUSD4Q5VX71 490 aa12.96□□□□□ -0.34
DNMT3B-201ENST00000201963 ARFGAP2Q8N6H7 521 aa12.96□□□□□ -0.34
DNMT3B-201ENST00000201963 EYA3Q99504 573 aa12.96□□□□□ -0.34
DNMT3B-201ENST00000201963 SYNRGQ9UMZ2 1314 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 BMP15O95972 392 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 TTF1Q15361 905 aaPredicted RBP12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 DALRD3Q5D0E6 543 aaKnown RBP12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 SRGAP1Q7Z6B7 1085 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 ZNF589Q86UQ0 364 aaPredicted RBP12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 NIM1KQ8IY84 436 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 PYM1Q9BRP8 204 aaKnown RBP12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 COL15A1P39059 1388 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 CMA1P23946 247 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 CCT5P48643 541 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 PICALMQ13492 652 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 IQUBQ8NA54 791 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 CLIC6Q96NY7 704 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 GPR101Q96P66 508 aaPredicted RBP12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 PLIN2Q99541 437 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 PHLPP2Q6ZVD8 1323 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 STX10O60499 249 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 SLFNL1Q499Z3 407 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 RILPL1Q5EBL4 403 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 COL23A1Q86Y22 540 aaPredicted RBP12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 RGS22Q8NE09 1264 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 INCENPQ9NQS7 918 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 EXOC1Q9NV70 894 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 CDC23Q9UJX2 597 aa12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 ANGEL1Q9UNK9 670 aaKnown RBP12.95□□□□□ -0.34
DNMT3B-201ENST00000201963 CTIFO43310 598 aaKnown RBP12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 CYP21A2P08686 494 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 RNASE9P60153 205 aaKnown RBP12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 RESTQ13127 1097 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 SARM1Q6SZW1 724 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 VPS36Q86VN1 386 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 PI4K2BQ8TCG2 481 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 SERTAD1Q9UHV2 236 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 CAPN7Q9Y6W3 813 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 NECTIN1Q15223 517 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 TTC14Q96N46 770 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 TCEAL9Q9UHQ7 104 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 TLDC2A0PJX2 215 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 NBPF26B4DH59 902 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 TBC1D8BQ0IIM8 1120 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 NBPF10Q6P3W6 841 aaKnown RBP12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 NBPF15Q8N660 670 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 FAM71BQ8TC56 605 aa12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 TLR7Q9NYK1 1049 aaKnown RBP12.94□□□□□ -0.34
DNMT3B-201ENST00000201963 ADD1P35611 737 aaKnown RBP12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 GNGT1P63211 74 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 ZNF174Q15697 407 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 TCERG1LQ5VWI1 586 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 TTLL6Q8N841 843 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 UBA5Q9GZZ9 404 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 GREM2Q9H772 168 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 ASIC1P78348 528 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 SF3A3Q12874 501 aaKnown RBP eCLIP12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 BEND3Q5T5X7 828 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 DPY19L2Q6NUT2 758 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 C8orf74Q6P047 294 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 JAKMIP2Q96AA8 810 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 KRT23Q9C075 422 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 A0A1W2PQ27 194 aa12.93□□□□□ -0.34
DNMT3B-201ENST00000201963 A0A1W2PQ64 194 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms