RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 SPTLC2O15270 562 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 ME1P48163 572 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 AKAP17AQ02040 695 aaKnown RBP21.49■■□□□ 1.03
CTSA-201ENST00000191018 GNL2Q13823 731 aaKnown RBP21.49■■□□□ 1.03
CTSA-201ENST00000191018 SAFBQ15424 915 aaKnown RBP eCLIP21.49■■□□□ 1.03
CTSA-201ENST00000191018 NOSTRINQ8IVI9 506 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 CCAR1Q8IX12 1150 aaKnown RBP21.49■■□□□ 1.03
CTSA-201ENST00000191018 DIS3L2Q8IYB7 885 aaKnown RBP21.49■■□□□ 1.03
CTSA-201ENST00000191018 SRBD1Q8N5C6 995 aaKnown RBP21.49■■□□□ 1.03
CTSA-201ENST00000191018 SUPT20HQ8NEM7 779 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 SHISA4Q96DD7 197 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 DDX4Q9NQI0 724 aaKnown RBP21.49■■□□□ 1.03
CTSA-201ENST00000191018 BTBD18B2RXH4 712 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 GABPAQ06546 454 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 PNMA1Q8ND90 353 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 ENGASEQ8NFI3 743 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 NEDD1Q8NHV4 660 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 ZDHHC15Q96MV8 337 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 GOLPH3LQ9H4A5 285 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 USP40Q9NVE5 1235 aa21.49■■□□□ 1.03
CTSA-201ENST00000191018 KIF5BP33176 963 aa21.48■■□□□ 1.03
CTSA-201ENST00000191018 CRKP46108 304 aa21.48■■□□□ 1.03
CTSA-201ENST00000191018 HDLBPQ00341 1268 aaKnown RBP21.48■■□□□ 1.03
CTSA-201ENST00000191018 SLC39A14Q15043 492 aa21.48■■□□□ 1.03
CTSA-201ENST00000191018 MAP3K11Q16584 847 aa21.48■■□□□ 1.03
CTSA-201ENST00000191018 AOC3Q16853 763 aa21.48■■□□□ 1.03
CTSA-201ENST00000191018 GRIPAP1Q4V328 841 aa21.48■■□□□ 1.03
CTSA-201ENST00000191018 CDC42EP5Q6NZY7 148 aa21.48■■□□□ 1.03
CTSA-201ENST00000191018 V9GY48 417 aaPredicted RBP21.48■■□□□ 1.03
CTSA-201ENST00000191018 NOVP48745 357 aa21.47■■□□□ 1.03
CTSA-201ENST00000191018 SNW1Q13573 536 aaKnown RBP21.47■■□□□ 1.03
CTSA-201ENST00000191018 PTPAQ15257 358 aa21.47■■□□□ 1.03
CTSA-201ENST00000191018 TNMDQ9H2S6 317 aa21.47■■□□□ 1.03
CTSA-201ENST00000191018 TAOK2Q9UL54 1235 aa21.47■■□□□ 1.03
CTSA-201ENST00000191018 PLIN4Q96Q06 1357 aa21.47■■□□□ 1.03
CTSA-201ENST00000191018 XBP1P17861 261 aa21.47■■□□□ 1.03
CTSA-201ENST00000191018 PICALMQ13492 652 aa21.47■■□□□ 1.03
CTSA-201ENST00000191018 SF3A1Q15459 793 aaKnown RBP21.47■■□□□ 1.03
CTSA-201ENST00000191018 PHF20Q9BVI0 1012 aa21.47■■□□□ 1.03
CTSA-201ENST00000191018 C21orf2O43822 256 aa21.46■■□□□ 1.03
CTSA-201ENST00000191018 GRM4Q14833 912 aa21.46■■□□□ 1.03
CTSA-201ENST00000191018 CAMK4Q16566 473 aa21.46■■□□□ 1.03
CTSA-201ENST00000191018 TTLL6Q8N841 843 aa21.46■■□□□ 1.03
CTSA-201ENST00000191018 RNF214Q8ND24 703 aa21.46■■□□□ 1.03
CTSA-201ENST00000191018 PPP1R9BQ96SB3 815 aa21.46■■□□□ 1.03
CTSA-201ENST00000191018 TMEM47Q9BQJ4 181 aa21.46■■□□□ 1.03
CTSA-201ENST00000191018 PPP6R2O75170 966 aa21.45■■□□□ 1.02
CTSA-201ENST00000191018 KCNA3P22001 575 aa21.45■■□□□ 1.02
CTSA-201ENST00000191018 FAM160A1Q05DH4 1040 aa21.45■■□□□ 1.02
CTSA-201ENST00000191018 AXDND1Q5T1B0 1012 aaPredicted RBP21.45■■□□□ 1.02
CTSA-201ENST00000191018 CCDC73Q6ZRK6 1079 aa21.45■■□□□ 1.02
CTSA-201ENST00000191018 KIAA0825Q8IV33 1275 aa21.45■■□□□ 1.02
CTSA-201ENST00000191018 MRPS27Q92552 414 aaKnown RBP21.45■■□□□ 1.02
CTSA-201ENST00000191018 OSBPL5Q9H0X9 879 aaPredicted RBP21.45■■□□□ 1.02
CTSA-201ENST00000191018 VPS54Q9P1Q0 977 aa21.45■■□□□ 1.02
CTSA-201ENST00000191018 CCDC173Q0VFZ6 552 aa21.45■■□□□ 1.02
CTSA-201ENST00000191018 FSIP1Q8NA03 581 aa21.45■■□□□ 1.02
CTSA-201ENST00000191018 MYO3BQ8WXR4 1341 aa21.44■■□□□ 1.02
CTSA-201ENST00000191018 hCG_1642624A0A1W2PR95 340 aa21.44■■□□□ 1.02
CTSA-201ENST00000191018 CCDC192P0DO97 292 aa21.44■■□□□ 1.02
CTSA-201ENST00000191018 TOB1P50616 345 aaPredicted RBP21.44■■□□□ 1.02
CTSA-201ENST00000191018 NR5A1Q13285 461 aa21.44■■□□□ 1.02
CTSA-201ENST00000191018 CCDC93Q567U6 631 aa21.44■■□□□ 1.02
CTSA-201ENST00000191018 ANP32BQ92688 251 aaKnown RBP21.44■■□□□ 1.02
CTSA-201ENST00000191018 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.44■■□□□ 1.02
CTSA-201ENST00000191018 MAD2L2Q9UI95 211 aa21.44■■□□□ 1.02
CTSA-201ENST00000191018 STX8Q9UNK0 236 aa21.44■■□□□ 1.02
CTSA-201ENST00000191018 SIPA1L1O43166 1804 aa21.44■■□□□ 1.02
CTSA-201ENST00000191018 GREB1LQ9C091 1923 aaPredicted RBP21.43■■□□□ 1.02
CTSA-201ENST00000191018 BAZ2BQ9UIF8 2168 aaKnown RBP21.43■■□□□ 1.02
CTSA-201ENST00000191018 RILPL1Q5EBL4 403 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 FMR1NBQ8N0W7 255 aaPredicted RBP21.43■■□□□ 1.02
CTSA-201ENST00000191018 OXER1Q8TDS5 423 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 SERPINA10Q9UK55 444 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 YDJCA8MPS7 323 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 PPIP5K2O43314 1243 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 GNAQP50148 359 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 NPY5RQ15761 445 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 PFKFB3Q16875 520 aaPredicted RBP21.43■■□□□ 1.02
CTSA-201ENST00000191018 UVSSAQ2YD98 709 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 RTKN2Q8IZC4 609 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 STAG2Q8N3U4 1231 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 PSMD1Q99460 953 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 SWAP70Q9UH65 585 aa21.43■■□□□ 1.02
CTSA-201ENST00000191018 PALM3A6NDB9 673 aaPredicted RBP21.42■■□□□ 1.02
CTSA-201ENST00000191018 SCG2P13521 617 aa21.42■■□□□ 1.02
CTSA-201ENST00000191018 DPEP1P16444 411 aa21.42■■□□□ 1.02
CTSA-201ENST00000191018 NFIAQ12857 509 aa21.42■■□□□ 1.02
CTSA-201ENST00000191018 CKAP2LQ8IYA6 745 aa21.42■■□□□ 1.02
CTSA-201ENST00000191018 CEP95Q96GE4 821 aa21.42■■□□□ 1.02
CTSA-201ENST00000191018 SERPINB13Q9UIV8 391 aa21.42■■□□□ 1.02
CTSA-201ENST00000191018 CTAGE5O15320 804 aa21.41■■□□□ 1.02
CTSA-201ENST00000191018 CMA1P23946 247 aa21.41■■□□□ 1.02
CTSA-201ENST00000191018 KRT2P35908 639 aa21.41■■□□□ 1.02
CTSA-201ENST00000191018 CCDC125Q86Z20 511 aa21.41■■□□□ 1.02
CTSA-201ENST00000191018 JMYQ8N9B5 988 aa21.41■■□□□ 1.02
CTSA-201ENST00000191018 PDLIM2Q96JY6 352 aa21.41■■□□□ 1.02
CTSA-201ENST00000191018 IDI2Q9BXS1 227 aa21.41■■□□□ 1.02
CTSA-201ENST00000191018 PCDHAC2Q9Y5I4 1007 aa21.41■■□□□ 1.02
CTSA-201ENST00000191018 IGKV6D-41A0A0C4DH26 115 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 264 ms