RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 CASP1P29466 404 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 HOXC9P31274 260 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 SLC7A5Q01650 507 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 SPAG1Q07617 926 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 DIS3L2Q8IYB7 885 aaKnown RBP11.3□□□□□ -0.6
CLDN18-201ENST00000183605 TEX13AQ9BXU3 409 aaPredicted RBP11.3□□□□□ -0.6
CLDN18-201ENST00000183605 HAUS4Q9H6D7 363 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 KDRP35968 1356 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 SF3B2Q13435 895 aaKnown RBP11.3□□□□□ -0.6
CLDN18-201ENST00000183605 HLTFQ14527 1009 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLDN18-201ENST00000183605 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 WDR93Q6P2C0 686 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 IQCA1Q86XH1 822 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 UBAC1Q9BSL1 405 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 FAM184BQ9ULE4 1060 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 NEXMIFQ5QGS0 1516 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 USO1O60763 962 aaKnown RBP11.3□□□□□ -0.6
CLDN18-201ENST00000183605 ABL1P00519 1130 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 ATP1A1P05023 1023 aaKnown RBP11.3□□□□□ -0.6
CLDN18-201ENST00000183605 ERCC5P28715 1186 aaPredicted RBP11.3□□□□□ -0.6
CLDN18-201ENST00000183605 SATB1Q01826 763 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 EPHA10Q5JZY3 1008 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 FMNL3Q8IVF7 1028 aa11.3□□□□□ -0.6
CLDN18-201ENST00000183605 ANGEL1Q9UNK9 670 aaKnown RBP11.3□□□□□ -0.6
CLDN18-201ENST00000183605 A0A1B0GTH6 734 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 A6NNZ2 444 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 MEFVO15553 781 aaPredicted RBP11.29□□□□□ -0.6
CLDN18-201ENST00000183605 NDUFA10O95299 355 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 SF3A3Q12874 501 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLDN18-201ENST00000183605 GCKRQ14397 625 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 TUBB8Q3ZCM7 444 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 TTC5Q8N0Z6 440 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 SH2D3CQ8N5H7 860 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 TRIML1Q8N9V2 468 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 OR8K1Q8NGG5 319 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 CABP5Q9NP86 173 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 MAST3O60307 1309 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 IDH1O75874 414 aaKnown RBP11.29□□□□□ -0.6
CLDN18-201ENST00000183605 FGAP02671 866 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 PEX19P40855 299 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 SLC39A6Q13433 755 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 ANKRD13DQ6ZTN6 518 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
CLDN18-201ENST00000183605 KLC4Q9NSK0 619 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 TFR2Q9UP52 801 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 KIF20BQ96Q89 1820 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 TACC1O75410 805 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 XBP1P17861 261 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 NNTQ13423 1086 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 SNCBQ16143 134 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 ZMYM1Q5SVZ6 1142 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 AMOTL1Q8IY63 956 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 CHP1Q99653 195 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 ABHD10Q9NUJ1 306 aa11.29□□□□□ -0.6
CLDN18-201ENST00000183605 B4E1Z4 1266 aa11.28□□□□□ -0.6
CLDN18-201ENST00000183605 BMP6P22004 513 aa11.28□□□□□ -0.6
CLDN18-201ENST00000183605 GCKP35557 465 aa11.28□□□□□ -0.6
CLDN18-201ENST00000183605 C8orf74Q6P047 294 aa11.28□□□□□ -0.6
CLDN18-201ENST00000183605 CCNI2Q6ZMN8 369 aaPredicted RBP11.28□□□□□ -0.6
CLDN18-201ENST00000183605 SPATS2Q86XZ4 545 aaKnown RBP11.28□□□□□ -0.6
CLDN18-201ENST00000183605 NOSTRINQ8IVI9 506 aa11.28□□□□□ -0.6
CLDN18-201ENST00000183605 CNPY4Q8N129 248 aa11.28□□□□□ -0.6
CLDN18-201ENST00000183605 MSL3Q8N5Y2 521 aaKnown RBP11.28□□□□□ -0.6
CLDN18-201ENST00000183605 BLZF1Q9H2G9 400 aa11.28□□□□□ -0.6
CLDN18-201ENST00000183605 DDX21Q9NR30 783 aaKnown RBP eCLIP11.28□□□□□ -0.6
CLDN18-201ENST00000183605 ZNF185O15231 689 aa11.28□□□□□ -0.6
CLDN18-201ENST00000183605 GUCY2FP51841 1108 aa11.28□□□□□ -0.6
CLDN18-201ENST00000183605 BAIAP2L1Q9UHR4 511 aa11.28□□□□□ -0.6
CLDN18-201ENST00000183605 GYPCP04921 128 aa11.27□□□□□ -0.6
CLDN18-201ENST00000183605 AARSP49588 968 aaKnown RBP eCLIP11.27□□□□□ -0.6
CLDN18-201ENST00000183605 TRIM14Q14142 442 aa11.27□□□□□ -0.6
CLDN18-201ENST00000183605 TTF1Q15361 905 aaPredicted RBP11.27□□□□□ -0.6
CLDN18-201ENST00000183605 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.6
CLDN18-201ENST00000183605 MSL1Q68DK7 614 aa11.27□□□□□ -0.6
CLDN18-201ENST00000183605 TBC1D31Q96DN5 1066 aa11.27□□□□□ -0.6
CLDN18-201ENST00000183605 RSRC1Q96IZ7 334 aaKnown RBP11.27□□□□□ -0.6
CLDN18-201ENST00000183605 CCDC42Q96M95 316 aa11.27□□□□□ -0.6
CLDN18-201ENST00000183605 PLCD4Q9BRC7 762 aa11.27□□□□□ -0.6
CLDN18-201ENST00000183605 TRIM6Q9C030 488 aaPredicted RBP11.27□□□□□ -0.6
CLDN18-201ENST00000183605 HPSEQ9Y251 543 aa11.27□□□□□ -0.6
CLDN18-201ENST00000183605 SH3TC1Q8TE82 1336 aa11.27□□□□□ -0.6
CLDN18-201ENST00000183605 PXDNLA1KZ92 1463 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 NEURL1BA8MQ27 555 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.61
CLDN18-201ENST00000183605 GUCY1A3Q02108 690 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 COPRSQ9NQ92 184 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 TRIM75PA6NK02 468 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 M0R2C6 588 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 AKR1B10O60218 316 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 ZNF18P17022 549 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 CXCR5P32302 372 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 COPB1P53618 953 aaKnown RBP11.27□□□□□ -0.61
CLDN18-201ENST00000183605 BIRC2Q13490 618 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 MORC3Q14149 939 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 KIRREL3Q8IZU9 778 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 LRRC59Q96AG4 307 aaKnown RBP11.27□□□□□ -0.61
CLDN18-201ENST00000183605 EEF2KMTQ96G04 330 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 TRIM47Q96LD4 638 aa11.27□□□□□ -0.61
CLDN18-201ENST00000183605 CCDC43Q96MW1 224 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms