RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 UBR2Q8IWV8 1755 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 TOGARAM1Q9Y4F4 1720 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 TFRCP02786 760 aaKnown RBP9.44□□□□□ -0.9
CDC27-201ENST00000066544 MORC3Q14149 939 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 SEC23AQ15436 765 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 PKN1Q16512 942 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 CCDC12Q8WUD4 166 aaPredicted RBP9.44□□□□□ -0.9
CDC27-201ENST00000066544 CEP131Q9UPN4 1083 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 PRDX5P30044 214 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 VPS16Q9H269 839 aa9.44□□□□□ -0.9
CDC27-201ENST00000066544 PPFIBP1Q86W92 1011 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 TMEM139Q8IV31 216 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 IGSF22Q8N9C0 903 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 CTCFLQ8NI51 663 aaPredicted RBP9.43□□□□□ -0.9
CDC27-201ENST00000066544 GPKOWQ92917 476 aaPredicted RBP eCLIP9.43□□□□□ -0.9
CDC27-201ENST00000066544 PNPLA7Q6ZV29 1317 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 MYH7P12883 1935 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 FAM237AA0A1B0GTK4 181 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 CASQ1P31415 396 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 TTC38Q5R3I4 469 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 MARCH10Q8NA82 808 aaPredicted RBP9.43□□□□□ -0.9
CDC27-201ENST00000066544 ENOX1Q8TC92 643 aaKnown RBP9.43□□□□□ -0.9
CDC27-201ENST00000066544 CTNND2Q9UQB3 1225 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 PLEKHG2Q9H7P9 1386 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 TSPY2A6NKD2 308 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 RNF26Q9BY78 433 aaPredicted RBP9.43□□□□□ -0.9
CDC27-201ENST00000066544 MRPL44Q9H9J2 332 aaKnown RBP9.43□□□□□ -0.9
CDC27-201ENST00000066544 DACH1Q9UI36 760 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 SYNRGQ9UMZ2 1314 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 ZNF384Q8TF68 577 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 PAGE5Q96GU1 130 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 RIOK1Q9BRS2 568 aaKnown RBP9.43□□□□□ -0.9
CDC27-201ENST00000066544 GTPBP4Q9BZE4 634 aaKnown RBP9.43□□□□□ -0.9
CDC27-201ENST00000066544 MORC2Q9Y6X9 1032 aaPredicted RBP9.43□□□□□ -0.9
CDC27-201ENST00000066544 PARP10Q53GL7 1025 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 RRAGBQ5VZM2 374 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 PUF60Q9UHX1 559 aaKnown RBP9.43□□□□□ -0.9
CDC27-201ENST00000066544 PARP3Q9Y6F1 533 aa9.43□□□□□ -0.9
CDC27-201ENST00000066544 CCP110O43303 1012 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 PLCD1P51178 756 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 RBL2Q08999 1139 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 DPYDQ12882 1025 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 SRBD1Q8N5C6 995 aaKnown RBP9.42□□□□□ -0.9
CDC27-201ENST00000066544 FAM84BQ96KN1 310 aaPredicted RBP9.42□□□□□ -0.9
CDC27-201ENST00000066544 CPVLQ9H3G5 476 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 BRMS1Q9HCU9 246 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 ZNF18P17022 549 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 CCDC93Q567U6 631 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 FAM182BQ5T319 152 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 CTR9Q6PD62 1173 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 TMCO3Q6UWJ1 677 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 TAB2Q9NYJ8 693 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 SLIT2O94813 1529 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 TROAPQ12815 778 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 CCDC34Q96HJ3 373 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 MCM9Q9NXL9 1143 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 SRP68Q9UHB9 627 aaKnown RBP9.42□□□□□ -0.9
CDC27-201ENST00000066544 MINPP1Q9UNW1 487 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 GPIHBP1Q8IV16 184 aa9.42□□□□□ -0.9
CDC27-201ENST00000066544 AKR1B15C9JRZ8 316 aaPredicted RBP9.41□□□□□ -0.9
CDC27-201ENST00000066544 N4BP3O15049 544 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 C4AP0C0L4 1744 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 C4BP0C0L5 1744 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 SLFN14P0C7P3 912 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 CASP14P31944 242 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 SARSP49591 514 aaKnown RBP9.41□□□□□ -0.9
CDC27-201ENST00000066544 DHX8Q14562 1220 aaKnown RBP9.41□□□□□ -0.9
CDC27-201ENST00000066544 RAD9BQ6WBX8 426 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 RTL9Q8NET4 1388 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 USP17L8P0C7I0 530 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 PTF1AQ7RTS3 328 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 TXNRD3Q86VQ6 643 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 DYNLL2Q96FJ2 89 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 PP2D1A8MPX8 630 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 MECOMQ03112 1051 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 GPR101Q96P66 508 aaPredicted RBP9.41□□□□□ -0.9
CDC27-201ENST00000066544 ZCCHC17Q9NP64 241 aaKnown RBP9.41□□□□□ -0.9
CDC27-201ENST00000066544 RNF216Q9NWF9 866 aaPredicted RBP9.41□□□□□ -0.9
CDC27-201ENST00000066544 GDAQ9Y2T3 454 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 MYH2Q9UKX2 1941 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 TADA3O75528 432 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 CUL4BQ13620 913 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 KANK3Q6NY19 840 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 ACRBPQ8NEB7 543 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 PHF20Q9BVI0 1012 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 PPP2R3AQ06190 1150 aa9.41□□□□□ -0.9
CDC27-201ENST00000066544 BMS1Q14692 1282 aaKnown RBP9.41□□□□□ -0.9
CDC27-201ENST00000066544 UTP14CQ5TAP6 766 aaKnown RBP9.41□□□□□ -0.9
CDC27-201ENST00000066544 PHLPP2Q6ZVD8 1323 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 STX10O60499 249 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 ABL1P00519 1130 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 PNMA6AP0CW24 399 aaPredicted RBP9.4□□□□□ -0.9
CDC27-201ENST00000066544 H2AFXP16104 143 aaPredicted RBP9.4□□□□□ -0.9
CDC27-201ENST00000066544 FUT2Q10981 343 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 TBX2Q13207 712 aaPredicted RBP9.4□□□□□ -0.9
CDC27-201ENST00000066544 ARGLU1Q9NWB6 273 aaPredicted RBP9.4□□□□□ -0.9
CDC27-201ENST00000066544 NUP98P52948 1817 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 FXR1P51114 621 aaKnown RBP eCLIP9.4□□□□□ -0.9
CDC27-201ENST00000066544 NR1I3Q14994 352 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 SPATA1Q5VX52 437 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms