RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PPP4CP60510 307 aa9.48□□□□□ -0.89
VAMP3-201ENST00000054666 FUT2Q10981 343 aa9.48□□□□□ -0.89
VAMP3-201ENST00000054666 DIXDC1Q155Q3 683 aa9.48□□□□□ -0.89
VAMP3-201ENST00000054666 C12orf60Q5U649 245 aa9.48□□□□□ -0.89
VAMP3-201ENST00000054666 OLFM4Q6UX06 510 aa9.48□□□□□ -0.89
VAMP3-201ENST00000054666 KRBA2Q6ZNG9 492 aa9.48□□□□□ -0.89
VAMP3-201ENST00000054666 TBC1D22AQ8WUA7 517 aa9.48□□□□□ -0.89
VAMP3-201ENST00000054666 GPR101Q96P66 508 aaPredicted RBP9.48□□□□□ -0.89
VAMP3-201ENST00000054666 CD209Q9NNX6 404 aa9.48□□□□□ -0.89
VAMP3-201ENST00000054666 NEMFO60524 1076 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 NMT2O60551 498 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 TRIM37O94972 964 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 TSPY3P0CV98 308 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 TSPY8P0CW00 308 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 TOB1P50616 345 aaPredicted RBP9.47□□□□□ -0.89
VAMP3-201ENST00000054666 TFAP4Q01664 338 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 PKN1Q16512 942 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 ZNF579Q8NAF0 562 aaKnown RBP9.47□□□□□ -0.89
VAMP3-201ENST00000054666 OXER1Q8TDS5 423 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 TGFBRAP1Q8WUH2 860 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 SPTLC3Q9NUV7 552 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 TUBE1Q9UJT0 475 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 FBXO2Q9UK22 296 aaPredicted RBP9.47□□□□□ -0.89
VAMP3-201ENST00000054666 PCDHB6Q9Y5E3 794 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 MORC2Q9Y6X9 1032 aaPredicted RBP9.47□□□□□ -0.89
VAMP3-201ENST00000054666 hCG_1642624A0A1W2PR95 340 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 SCG2P13521 617 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 IL1R1P14778 569 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 BTDP43251 543 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 GNAQP50148 359 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 EVX2Q03828 476 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 DGKHQ86XP1 1220 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 ELOA2Q8IYF1 753 aaPredicted RBP9.47□□□□□ -0.89
VAMP3-201ENST00000054666 TEX11Q8IYF3 940 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 ZNF444Q8N0Y2 327 aaPredicted RBP9.47□□□□□ -0.89
VAMP3-201ENST00000054666 KIAA1524Q8TCG1 905 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 CRAMP1Q96RY5 1269 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 RTFDC1Q9BY42 306 aaPredicted RBP9.47□□□□□ -0.89
VAMP3-201ENST00000054666 PODXL2Q9NZ53 605 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 PYCARDQ9ULZ3 195 aa9.47□□□□□ -0.89
VAMP3-201ENST00000054666 SRPRBQ9Y5M8 271 aaKnown RBP9.47□□□□□ -0.89
VAMP3-201ENST00000054666 LRRC37AA6NMS7 1700 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 C6orf229H3BNL8 230 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 POLRMTO00411 1230 aaKnown RBP9.46□□□□□ -0.89
VAMP3-201ENST00000054666 PPEF1O14829 653 aaPredicted RBP9.46□□□□□ -0.89
VAMP3-201ENST00000054666 IKBKBO14920 756 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 SMC2O95347 1197 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 CALML3P27482 149 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 HOXA10P31260 410 aaPredicted RBP9.46□□□□□ -0.89
VAMP3-201ENST00000054666 NLRP5P59047 1200 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 PNOCQ13519 176 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 MFSD14BQ5SR56 506 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 KANK3Q6NY19 840 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 SLC51AQ86UW1 340 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 MAPKAPK5Q8IW41 473 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 SRBD1Q8N5C6 995 aaKnown RBP9.46□□□□□ -0.89
VAMP3-201ENST00000054666 PNMA1Q8ND90 353 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 MKRN1Q9UHC7 482 aaKnown RBP9.46□□□□□ -0.89
VAMP3-201ENST00000054666 DACH1Q9UI36 760 aa9.46□□□□□ -0.89
VAMP3-201ENST00000054666 BRWD3Q6RI45 1802 aa9.46□□□□□ -0.9
VAMP3-201ENST00000054666 GSDMDP57764 484 aa9.46□□□□□ -0.9
VAMP3-201ENST00000054666 DDR1Q08345 913 aa9.46□□□□□ -0.9
VAMP3-201ENST00000054666 POSTNQ15063 836 aa9.46□□□□□ -0.9
VAMP3-201ENST00000054666 PFKFB3Q16875 520 aaPredicted RBP9.46□□□□□ -0.9
VAMP3-201ENST00000054666 LONRF3Q496Y0 759 aa9.46□□□□□ -0.9
VAMP3-201ENST00000054666 SPECC1Q5M775 1068 aa9.46□□□□□ -0.9
VAMP3-201ENST00000054666 METTL16Q86W50 562 aaKnown RBP9.46□□□□□ -0.9
VAMP3-201ENST00000054666 TBC1D16Q8TBP0 767 aa9.46□□□□□ -0.9
VAMP3-201ENST00000054666 FERMT2Q96AC1 680 aa9.46□□□□□ -0.9
VAMP3-201ENST00000054666 POLR2DO15514 142 aaKnown RBP9.45□□□□□ -0.9
VAMP3-201ENST00000054666 TRAPPC10P48553 1259 aa9.45□□□□□ -0.9
VAMP3-201ENST00000054666 MYL5Q02045 173 aa9.45□□□□□ -0.9
VAMP3-201ENST00000054666 DHX8Q14562 1220 aaKnown RBP9.45□□□□□ -0.9
VAMP3-201ENST00000054666 TXNRD1Q16881 649 aa9.45□□□□□ -0.9
VAMP3-201ENST00000054666 TTC38Q5R3I4 469 aa9.45□□□□□ -0.9
VAMP3-201ENST00000054666 C17orf53Q8N3J3 647 aaPredicted RBP9.45□□□□□ -0.9
VAMP3-201ENST00000054666 CCDC148Q8NFR7 591 aa9.45□□□□□ -0.9
VAMP3-201ENST00000054666 DYNLL2Q96FJ2 89 aa9.45□□□□□ -0.9
VAMP3-201ENST00000054666 TMX4Q9H1E5 349 aaPredicted RBP9.45□□□□□ -0.9
VAMP3-201ENST00000054666 TCP11L1Q9NUJ3 509 aa9.45□□□□□ -0.9
VAMP3-201ENST00000054666 SAP30BPQ9UHR5 308 aaKnown RBP9.45□□□□□ -0.9
VAMP3-201ENST00000054666 NRBP1Q9UHY1 535 aa9.45□□□□□ -0.9
VAMP3-201ENST00000054666 UQCRHLA0A096LP55 91 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 GPR75-ASB3A0A0A6YYF3 556 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 NRDCO43847 1150 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 UQCRHP07919 91 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 GRM4Q14833 912 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 GRIK5Q16478 980 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 ISM2Q6H9L7 571 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 RCSD1Q6JBY9 416 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 FILIP1Q7Z7B0 1213 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 ANKS1AQ92625 1134 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 SMARCE1Q969G3 411 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 PRIMPOLQ96LW4 560 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 CSRNP2Q9H175 543 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 STX8Q9UNK0 236 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 CDK5RAP2Q96SN8 1893 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 DDX60LQ5H9U9 1706 aaKnown RBP9.44□□□□□ -0.9
VAMP3-201ENST00000054666 FLT1P17948 1338 aa9.44□□□□□ -0.9
VAMP3-201ENST00000054666 FAM205CA6NFA0 338 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms