RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 CNGA4Q8IV77 575 aa22.29■■□□□ 1.16
HOXA11-201ENST00000006015 SUGP1Q8IWZ8 645 aaKnown RBP22.29■■□□□ 1.16
HOXA11-201ENST00000006015 MED15Q96RN5 788 aa22.29■■□□□ 1.16
HOXA11-201ENST00000006015 DEF6Q9H4E7 631 aa22.29■■□□□ 1.16
HOXA11-201ENST00000006015 TEX33O43247 280 aa22.29■■□□□ 1.16
HOXA11-201ENST00000006015 PBX1P40424 430 aa22.29■■□□□ 1.16
HOXA11-201ENST00000006015 DNAJC21Q5F1R6 531 aaKnown RBP22.29■■□□□ 1.16
HOXA11-201ENST00000006015 ANGEL1Q9UNK9 670 aaKnown RBP22.29■■□□□ 1.16
HOXA11-201ENST00000006015 KANK3Q6NY19 840 aa22.28■■□□□ 1.16
HOXA11-201ENST00000006015 APTXQ7Z2E3 356 aaKnown RBP22.28■■□□□ 1.16
HOXA11-201ENST00000006015 VGLL2Q8N8G2 317 aa22.28■■□□□ 1.16
HOXA11-201ENST00000006015 NCAPGQ9BPX3 1015 aa22.28■■□□□ 1.16
HOXA11-201ENST00000006015 DENND2AQ9ULE3 1009 aa22.28■■□□□ 1.16
HOXA11-201ENST00000006015 ZNF213O14771 459 aa22.28■■□□□ 1.16
HOXA11-201ENST00000006015 GPAA1O43292 621 aa22.28■■□□□ 1.16
HOXA11-201ENST00000006015 MCM3P25205 808 aa22.28■■□□□ 1.16
HOXA11-201ENST00000006015 SLC9C2Q5TAH2 1124 aa22.28■■□□□ 1.16
HOXA11-201ENST00000006015 CTAGE1Q96RT6 745 aa22.28■■□□□ 1.16
HOXA11-201ENST00000006015 SERTAD1Q9UHV2 236 aa22.28■■□□□ 1.16
HOXA11-201ENST00000006015 PHKA1P46020 1223 aa22.27■■□□□ 1.16
HOXA11-201ENST00000006015 EIF5P55010 431 aaKnown RBP22.27■■□□□ 1.16
HOXA11-201ENST00000006015 TADA2BQ86TJ2 420 aa22.27■■□□□ 1.16
HOXA11-201ENST00000006015 STK11IPQ8N1F8 1099 aa22.27■■□□□ 1.16
HOXA11-201ENST00000006015 NKX2-3Q8TAU0 364 aa22.27■■□□□ 1.16
HOXA11-201ENST00000006015 APPBP2Q92624 585 aa22.27■■□□□ 1.16
HOXA11-201ENST00000006015 MYCBPQ99417 103 aaPredicted RBP22.27■■□□□ 1.16
HOXA11-201ENST00000006015 CDC5LQ99459 802 aaKnown RBP22.27■■□□□ 1.16
HOXA11-201ENST00000006015 PIH1D3Q9NQM4 214 aaKnown RBP22.27■■□□□ 1.16
HOXA11-201ENST00000006015 A0A087WUV0 522 aaPredicted RBP22.27■■□□□ 1.16
HOXA11-201ENST00000006015 POLR2DO15514 142 aaKnown RBP22.27■■□□□ 1.16
HOXA11-201ENST00000006015 PDE8AO60658 829 aa22.27■■□□□ 1.16
HOXA11-201ENST00000006015 MAP9Q49MG5 647 aa22.27■■□□□ 1.16
HOXA11-201ENST00000006015 NOA1Q8NC60 698 aaKnown RBP22.27■■□□□ 1.16
HOXA11-201ENST00000006015 CCDC148Q8NFR7 591 aa22.27■■□□□ 1.16
HOXA11-201ENST00000006015 WWC3Q9ULE0 1092 aa22.27■■□□□ 1.16
HOXA11-201ENST00000006015 IDH1O75874 414 aaKnown RBP22.26■■□□□ 1.15
HOXA11-201ENST00000006015 PRPF6O94906 941 aaKnown RBP22.26■■□□□ 1.15
HOXA11-201ENST00000006015 PDE8BO95263 885 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 FILIP1LQ4L180 1135 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 SPECC1Q5M775 1068 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 SPATA1Q5VX52 437 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 TMTC1Q8IUR5 882 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 CPLX3Q8WVH0 158 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 ADD3Q9UEY8 706 aaKnown RBP22.26■■□□□ 1.15
HOXA11-201ENST00000006015 MYO6Q9UM54 1294 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 ITIH6Q6UXX5 1313 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 IL6STP40189 918 aaPredicted RBP22.26■■□□□ 1.15
HOXA11-201ENST00000006015 SUSD4Q5VX71 490 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 MMS22LQ6ZRQ5 1243 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 SPATA20Q8TB22 786 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 PHKBQ93100 1093 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 DRC1Q96MC2 740 aa22.26■■□□□ 1.15
HOXA11-201ENST00000006015 FBXO2Q9UK22 296 aaPredicted RBP22.26■■□□□ 1.15
HOXA11-201ENST00000006015 SYNRGQ9UMZ2 1314 aa22.25■■□□□ 1.15
HOXA11-201ENST00000006015 LRP6O75581 1613 aa22.25■■□□□ 1.15
HOXA11-201ENST00000006015 SH2B2O14492 632 aaPredicted RBP22.25■■□□□ 1.15
HOXA11-201ENST00000006015 SEMA3EO15041 775 aa22.25■■□□□ 1.15
HOXA11-201ENST00000006015 SYF2O95926 243 aaKnown RBP22.25■■□□□ 1.15
HOXA11-201ENST00000006015 TFRCP02786 760 aaKnown RBP22.25■■□□□ 1.15
HOXA11-201ENST00000006015 PTPREP23469 700 aa22.25■■□□□ 1.15
HOXA11-201ENST00000006015 IARSP41252 1262 aaKnown RBP22.25■■□□□ 1.15
HOXA11-201ENST00000006015 AMPD2Q01433 879 aa22.25■■□□□ 1.15
HOXA11-201ENST00000006015 ZNF34Q8IZ26 560 aa22.25■■□□□ 1.15
HOXA11-201ENST00000006015 ACRBPQ8NEB7 543 aa22.25■■□□□ 1.15
HOXA11-201ENST00000006015 INTS5Q6P9B9 1019 aaKnown RBP22.24■■□□□ 1.15
HOXA11-201ENST00000006015 NOSTRINQ8IVI9 506 aa22.24■■□□□ 1.15
HOXA11-201ENST00000006015 ZNF579Q8NAF0 562 aaKnown RBP22.24■■□□□ 1.15
HOXA11-201ENST00000006015 SEC31BQ9NQW1 1179 aa22.24■■□□□ 1.15
HOXA11-201ENST00000006015 CASP14P31944 242 aa22.24■■□□□ 1.15
HOXA11-201ENST00000006015 ATP6V1AP38606 617 aa22.24■■□□□ 1.15
HOXA11-201ENST00000006015 APOA5Q6Q788 366 aa22.24■■□□□ 1.15
HOXA11-201ENST00000006015 STK36Q9NRP7 1315 aa22.24■■□□□ 1.15
HOXA11-201ENST00000006015 SLIT2O94813 1529 aa22.23■■□□□ 1.15
HOXA11-201ENST00000006015 ACTN4O43707 911 aaKnown RBP22.23■■□□□ 1.15
HOXA11-201ENST00000006015 CDKAL1Q5VV42 579 aa22.23■■□□□ 1.15
HOXA11-201ENST00000006015 HPCAL4Q9UM19 191 aa22.23■■□□□ 1.15
HOXA11-201ENST00000006015 ERVV-1B6SEH8 477 aa22.23■■□□□ 1.15
HOXA11-201ENST00000006015 ANKRD65E5RJM6 399 aa22.23■■□□□ 1.15
HOXA11-201ENST00000006015 GYPCP04921 128 aa22.23■■□□□ 1.15
HOXA11-201ENST00000006015 ARHGAP25P42331 645 aa22.23■■□□□ 1.15
HOXA11-201ENST00000006015 GRAMD1CQ8IYS0 662 aa22.23■■□□□ 1.15
HOXA11-201ENST00000006015 SMARCC1Q92922 1105 aaPredicted RBP22.23■■□□□ 1.15
HOXA11-201ENST00000006015 PLEKHA4Q9H4M7 779 aa22.23■■□□□ 1.15
HOXA11-201ENST00000006015 TAOK2Q9UL54 1235 aa22.23■■□□□ 1.15
HOXA11-201ENST00000006015 ADD2P35612 726 aa22.22■■□□□ 1.15
HOXA11-201ENST00000006015 USP14P54578 494 aa22.22■■□□□ 1.15
HOXA11-201ENST00000006015 DDB1Q16531 1140 aa22.22■■□□□ 1.15
HOXA11-201ENST00000006015 MYO5AQ9Y4I1 1855 aaKnown RBP22.22■■□□□ 1.15
HOXA11-201ENST00000006015 NUTM2BA6NNL0 878 aaPredicted RBP22.22■■□□□ 1.15
HOXA11-201ENST00000006015 NUTM2EB1AL46 878 aaPredicted RBP22.22■■□□□ 1.15
HOXA11-201ENST00000006015 SHOX2O60902 331 aaPredicted RBP22.22■■□□□ 1.15
HOXA11-201ENST00000006015 APPP05067 770 aa22.22■■□□□ 1.15
HOXA11-201ENST00000006015 RXRAP19793 462 aa22.22■■□□□ 1.15
HOXA11-201ENST00000006015 CRKLP46109 303 aaKnown RBP22.22■■□□□ 1.15
HOXA11-201ENST00000006015 NTRK3Q16288 839 aa22.22■■□□□ 1.15
HOXA11-201ENST00000006015 SWT1Q5T5J6 900 aaKnown RBP22.22■■□□□ 1.15
HOXA11-201ENST00000006015 MCTP2Q6DN12 878 aa22.22■■□□□ 1.15
HOXA11-201ENST00000006015 NCAPH2Q6IBW4 605 aa22.22■■□□□ 1.15
HOXA11-201ENST00000006015 MICU3Q86XE3 530 aa22.22■■□□□ 1.15
HOXA11-201ENST00000006015 NBPF3Q9H094 633 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms