RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Tmem2Q5FWI3 1383 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 AppP12023 770 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Lrrn4P59383 733 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 TraddQ3U0V2 310 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Klra5Q60652 266 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Q8BWG4 1187 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 OplahQ8K010 1288 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Echdc1Q9D9V3 322 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Egfl6Q9JJZ5 550 aa16.57■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Hdgfl1Q2VPR5 283 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Cd37Q61470 281 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Sh3gl2Q62420 352 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Efcab14Q8BGQ6 484 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 D130040H23RikQ8BII3 405 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Usp33Q8R5K2 909 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Lmbr1lQ9D1E5 489 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Uts2Q9QZQ3 123 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Gm1979E9QAN3 267 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Nlrp4cQ3TKR3 982 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Wdr44Q6NVE8 915 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Tmem59lQ7TNI2 337 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Marf1Q8BJ34 1730 aaKnown RBP16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Abcd1P48410 736 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Pfkfb2P70265 519 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Arhgef16Q3U5C8 713 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Trim56Q80VI1 734 aaKnown RBP16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 GopcQ8BH60 463 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Rhot2Q8JZN7 620 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Slf1Q8R3P9 1054 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Erlin1Q91X78 346 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Tube1Q9D6T1 475 aa16.56■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Gm21698A0A087WQP8 267 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Gm5580A0A0N4SVP8 411 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Pdrg1P59048 133 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Enox1Q8BHR2 643 aaKnown RBP16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Scrn1Q9CZC8 414 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Gm6588E9Q3K0 461 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Pde6bP23440 856 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Myo1fP70248 1099 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Fmnl3Q6ZPF4 1028 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Slc39a6Q8C145 765 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Gle1Q8R322 699 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 SncbQ91ZZ3 133 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Snx1Q9WV80 522 aa16.55■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Tet3Q8BG87 1668 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Llgl2Q3TJ91 1027 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Kctd16Q5DTY9 427 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Adora1Q60612 326 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ccdc50Q810U5 305 aaKnown RBP16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Rapgef3Q8VCC8 918 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Map2P20357 1828 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Cyp26c1B2RXA7 518 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Hspd1P63038 573 aaKnown RBP16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Tubb5P99024 444 aaKnown RBP16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Zbed4Q80WQ9 1168 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Rint1Q8BZ36 792 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Peg12Q9WVA7 283 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 TnksQ6PFX9 1320 aa16.54■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Cnksr1A2A9K7 700 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Tsga10Q6NY15 697 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Tubb2aQ7TMM9 445 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Pcdhb3Q91XZ7 784 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ccdc43Q9CR29 222 aaKnown RBP16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Tubb2bQ9CWF2 445 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Klhl10Q9D5V2 608 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Zbtb12Q9Z150 459 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Usp42B2RQC2 1324 aaKnown RBP16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Clcn6O35454 870 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Igfbp6P47880 238 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Tmod1P49813 359 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Trim80Q3V061 624 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ano2Q8CFW1 1002 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ddx20Q9JJY4 825 aaKnown RBP16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ptpn23Q6PB44 1692 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Bcl9lQ67FY2 1494 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Grm8P47743 908 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Tubb4bP68372 445 aaKnown RBP16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Prdm1Q60636 856 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ppp1r1bQ60829 194 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Ddx42Q810A7 929 aaKnown RBP16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Hps6Q8BLY7 805 aa16.53■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Fam170aQ66LM6 333 aa16.52■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Abcf2Q99LE6 628 aaKnown RBP16.52■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Clip2Q9Z0H8 1047 aa16.52■□□□□ 0.24
Ebf3-208ENSMUST00000210774 AdnpQ9Z103 1108 aaKnown RBP16.52■□□□□ 0.24
Ebf3-208ENSMUST00000210774 Slit2Q9R1B9 1521 aa16.52■□□□□ 0.23
Ebf3-208ENSMUST00000210774 Gm28510A0A087WP28 240 aa16.52■□□□□ 0.23
Ebf3-208ENSMUST00000210774 MtrrQ8C1A3 696 aa16.52■□□□□ 0.23
Ebf3-208ENSMUST00000210774 Vps53Q8CCB4 832 aa16.52■□□□□ 0.23
Ebf3-208ENSMUST00000210774 Dnm1lQ8K1M6 742 aa16.52■□□□□ 0.23
Ebf3-208ENSMUST00000210774 Farp2Q91VS8 1065 aa16.52■□□□□ 0.23
Ebf3-208ENSMUST00000210774 Gm20425E9Q035 978 aaKnown RBP16.51■□□□□ 0.23
Ebf3-208ENSMUST00000210774 ChkbO55229 394 aa16.51■□□□□ 0.23
Ebf3-208ENSMUST00000210774 Sem1P60897 70 aa16.51■□□□□ 0.23
Ebf3-208ENSMUST00000210774 Stkld1Q80YS9 662 aa16.51■□□□□ 0.23
Ebf3-208ENSMUST00000210774 F13a1Q8BH61 732 aa16.51■□□□□ 0.23
Ebf3-208ENSMUST00000210774 RalylQ8BTF8 293 aa16.51■□□□□ 0.23
Ebf3-208ENSMUST00000210774 DymQ8CHY3 669 aa16.51■□□□□ 0.23
Ebf3-208ENSMUST00000210774 PtprvP70289 1705 aa16.51■□□□□ 0.23
Ebf3-208ENSMUST00000210774 Eif4a1P60843 406 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms