RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Adarb2Q9JI20 745 aa17.79■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Gabpb2P81069 414 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Esyt2Q3TZZ7 845 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Tktl2Q9D4D4 627 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Myo1hQ9D6A1 958 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Ythdc1E9Q5K9 736 aaKnown RBP17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 MarcksP26645 309 aaKnown RBP17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Bag1Q60739 355 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Ift88Q61371 824 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Adck2Q6NSR3 617 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Sval3Q76I99 144 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Adck5Q80V03 582 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 HmcesQ8R1M0 353 aaKnown RBP17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Gimap7Q8R379 293 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Gpaa1Q9WTK3 621 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Zkscan5Q9Z1D8 819 aa17.78■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Gm36210A0A1B0GS00 229 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Pfkfb3A7UAK5 555 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Gm7347D3YYI9 267 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Speer4aF8VPX6 267 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 EmbP21995 330 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Ftl1P29391 183 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Ric8aQ3TIR3 530 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Mars2Q499X9 586 aaKnown RBP17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Hdac4Q6NZM9 1076 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Usp50Q6P8X6 390 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Q8BT18 775 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Caps2Q8BUG5 550 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Taf6lQ8R2K4 616 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Brms1Q99N20 246 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Hip1rQ9JKY5 1068 aa17.77■□□□□ 0.44
Sdc1-205ENSMUST00000171158 Sun3Q5SS91 320 aa17.77■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Cep131Q62036 1060 aa17.77■□□□□ 0.43
Sdc1-205ENSMUST00000171158 E2f4Q8R0K9 410 aa17.77■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Tab2Q99K90 693 aa17.77■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Bcl11bQ99PV8 884 aa17.77■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ankrd40Q5SUE8 363 aa17.76■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Nek9Q8K1R7 984 aa17.76■□□□□ 0.43
Sdc1-205ENSMUST00000171158 GakQ99KY4 1305 aa17.76■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ccdc88aQ5SNZ0 1873 aa17.76■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Api5O35841 504 aaKnown RBP17.76■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Stx8O88983 236 aa17.76■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Trappc10Q3TLI0 1259 aa17.76■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Nab2Q61127 525 aa17.76■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Clstn1Q9EPL2 979 aa17.76■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Col20a1Q923P0 1320 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Cyp2j7A0A140T8U1 504 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Gm21969J3QJZ1 289 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ccdc191J3QQ27 883 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Nup133Q8R0G9 1155 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Slc14a2Q8R4T9 930 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Scrn1Q9CZC8 414 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Sgpp1Q9JI99 430 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Zfyve9A2A8R0 1397 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 A0A0U1RNP2 1173 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Gucy1a2F8VQK3 730 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 LrmpQ60664 539 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Trim29Q8R2Q0 587 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 4930548H24RikQ9D496 437 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 ChmQ9QXG2 665 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Epb41l3Q9WV92 929 aa17.75■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ess2O70279 479 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 H2afxP27661 143 aaKnown RBP17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Cdh15P33146 784 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Sox5P35710 763 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ptpn12P35831 775 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Pbx1P41778 430 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ovgp1Q62010 721 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Rbm12b2Q66JV4 834 aaKnown RBP17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 DlatQ8BMF4 642 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Eno4Q8C042 619 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Cd209bQ8CJ91 325 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Kiaa0319lQ8K135 1048 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Vps18Q8R307 973 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 RarsQ9D0I9 660 aaKnown RBP17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Thap2Q9D305 217 aa17.74■□□□□ 0.43
Sdc1-205ENSMUST00000171158 4932429P05RikA2ADI4 785 aa17.73■□□□□ 0.43
Sdc1-205ENSMUST00000171158 BaatQ91X34 420 aa17.73■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Fam76aQ922G2 307 aa17.73■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Mfap3Q922T2 349 aa17.73■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Itga2bQ9QUM0 1033 aa17.73■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Tbc1d2B1AVH7 922 aa17.73■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ccdc102aQ3TMW1 549 aa17.73■□□□□ 0.43
Sdc1-205ENSMUST00000171158 AllcQ9JHX6 414 aa17.73■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Tom1O88746 492 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Usp53P15975 1069 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Gas1Q01721 343 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Aak1Q3UHJ0 959 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Tekt3Q6X6Z7 490 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Dusp9Q7TNL7 452 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ccp110Q7TSH4 1004 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Tmem60Q8K174 133 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 LpxnQ99N69 386 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Vstm4T1NXB5 319 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Kif13bA0A286YCV9 1847 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Eif5P59325 429 aaKnown RBP17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Rasal3Q8C2K5 1041 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Ndufv1Q91YT0 464 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Tomm22Q9CPQ3 142 aa17.72■□□□□ 0.43
Sdc1-205ENSMUST00000171158 Desi2Q9D291 194 aa17.72■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms