RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Srgap2Q91Z67 1071 aa12.98□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Prr29B1ARI9 187 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ugt1a6bK9J7B2 531 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Elf1Q60775 612 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ugt1a6Q64435 531 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 KaznQ69ZS8 779 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Spata24Q6P926 205 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ugt1a7cQ6ZQM8 531 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Suclg2Q9Z2I8 433 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Efcab6Q6P1E8 1516 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Hmgb2P30681 210 aaKnown RBP12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 1700013D24RikQ0P521 120 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cep63Q3UPP8 700 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Bbs9Q811G0 885 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Efcab8Q8C9R9 203 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Fermt2Q8CIB5 680 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Fam133bQ9CVI2 245 aaKnown RBP12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 DohhA0A1Y7VJ29 135 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gna11P21278 359 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Sox13Q04891 613 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 HelbQ6NVF4 1074 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Fam228aQ8CDW1 299 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Tcp11l2Q8K1H7 517 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Fam217aQ9D9W6 419 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cib2Q9Z309 187 aa12.97□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Tldc2A2ACG1 198 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ddit3P35639 168 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 AdkP55264 361 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 G3bp2P97379 482 aaKnown RBP12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Cdr2P97817 455 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Snx25Q3ZT31 840 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ehbp1Q69ZW3 1231 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Hps4Q99KG7 671 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Rsrc1Q9DBU6 334 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gm43638A0A0J9YU36 694 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gm4758L7N258 96 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Diaph2O70566 1098 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ercc5P35689 1170 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 GssP51855 474 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Dok7Q18PE0 504 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Mkrn3Q60764 544 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Rasgrp4Q8BTM9 673 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Caps2Q8BUG5 550 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Golph3lQ8R088 285 aaKnown RBP12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 MlxiplQ99MZ3 864 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Atg3Q9CPX6 314 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Gm5580A0A0N4SVP8 411 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Sik1Q60670 779 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Acap3Q6NXL5 833 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Ribc1Q9D0B8 379 aa12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 SarnpQ9D1J3 210 aaKnown RBP12.96□□□□□ -0.33
Ndc1-204ENSMUST00000139560 Zfp804bA0A0G2JGH6 1343 aa12.96□□□□□ -0.34
Ndc1-204ENSMUST00000139560 1700029H14RikE9PY36 240 aa12.96□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Rps6ka1P18653 724 aa12.96□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Tubb4bP68372 445 aaKnown RBP12.96□□□□□ -0.34
Ndc1-204ENSMUST00000139560 HarsQ61035 509 aa12.96□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Wdr44Q6NVE8 915 aa12.96□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Prr18Q6PAN7 307 aa12.96□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Zbtb40Q6PCS8 1258 aa12.96□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ccnt1Q9QWV9 724 aaKnown RBP12.96□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Cbx8Q9QXV1 362 aa12.96□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ncf2O70145 525 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 HellsQ60848 821 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Panx2Q6IMP4 677 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Mtss1lQ6P9S0 715 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Pak2Q8CIN4 524 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 StambpQ9CQ26 424 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Lcmt1A0A0U1RNF2 332 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 VrtnQ3SYK4 740 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Dcaf5Q80T85 946 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Pnma3Q8JZW8 466 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Kcnq3Q8K3F6 873 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Epb41l2O70318 988 aaKnown RBP12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Zbtb38Q3LR78 1197 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Q8CEZ4 452 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Klhl20Q8VCK5 604 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Pold4Q9CWP8 107 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 GdaQ9R111 454 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Pde3aQ9Z0X4 1141 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ccdc152E9PX14 254 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ccdc129Q14B48 1034 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 RilpQ5ND29 369 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 MarsQ68FL6 902 aaKnown RBP12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Tacc3Q9JJ11 631 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Vstm4T1NXB5 319 aa12.95□□□□□ -0.34
Ndc1-204ENSMUST00000139560 A0A1Y7VML8 143 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Eef2kO08796 724 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Trim80Q3V061 624 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Spata2Q8K004 515 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Atp6v0a4Q920R6 833 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ccdc7Q9D541 371 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Dusp10Q9ESS0 483 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 FibpQ9JI19 357 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Cyth1Q9QX11 398 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ak9G3UYQ4 1894 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Copb2O55029 905 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Gfpt1P47856 697 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Zbtb16Q3UQ17 673 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Filip1Q9CS72 1211 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Hdac6Q9Z2V5 1149 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms