RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Q8C5K5 320 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 ZgpatQ8VDM1 511 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Spats2lQ91WJ7 558 aaKnown RBP12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 MrgbpQ9DAT2 204 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Ftsj3Q9DBE9 838 aaKnown RBP12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 PyglQ9ET01 850 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Gm21680A0A0G2JGR8 267 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Zfp213E9QAW0 468 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Gm5814J3QP80 125 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Tubb4bP68372 445 aaKnown RBP12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Gsdma2Q32M21 443 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Galnt17Q7TT15 598 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Hps3Q91VB4 1002 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Uap1Q91YN5 522 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Mrfap1Q9CQL7 125 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Ascc1Q9D8Z1 356 aaKnown RBP12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Thsd7aQ69ZU6 1645 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Atp10bB1AWN4 1474 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Eftud2O08810 971 aaKnown RBP12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Pls1Q3V0K9 630 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Fam228bQ497Q6 232 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Orc2Q60862 576 aaKnown RBP12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Sh3gl2Q62420 352 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Bpifb6Q8BU51 449 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Xrcc4Q924T3 326 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Acsbg1Q99PU5 721 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Txnrd1Q9JMH6 613 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Robo1O89026 1612 aa12.85□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Pet2A2AHY8 747 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Il27raO70394 623 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Pde6bP23440 856 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Dab2P98078 766 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Tax1bp1Q3UKC1 814 aaKnown RBP12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Arhgap44Q5SSM3 814 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Soga3Q6NZL0 945 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 OplahQ8K010 1288 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Efcab2Q9CQ46 164 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Ankrd1Q9CR42 319 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Bag3Q9JLV1 577 aaKnown RBP12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Nrxn3Q6P9K9 1571 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Zfp105G3X9I0 524 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 HdgfP51859 237 aaKnown RBP12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Ahcyl1Q80SW1 530 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 WdpcpQ8C456 722 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 4930504O13RikQ8C5Z9 145 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Polr3dQ91WD1 398 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 AdarQ99MU3 1178 aaKnown RBP12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Dlg5E9Q9R9 1921 aa12.84□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Ctdnep1Q3TP92 244 aa12.83□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Arl13bQ640N2 427 aa12.83□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Leng8Q8CBY3 785 aaKnown RBP12.83□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Dnm1lQ8K1M6 742 aa12.83□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Caap1Q8VDY9 356 aa12.83□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Erlin1Q91X78 346 aa12.83□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Dhx58Q99J87 678 aa12.83□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Calr3Q9D9Q6 380 aa12.83□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Rsrc1Q9DBU6 334 aa12.83□□□□□ -0.35
Ssh1-201ENSMUST00000077689 Scgb2b18A0A087WPA9 112 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tsr1Q5SWD9 803 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Fkbp5Q64378 456 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Lrrcc1Q69ZB0 1026 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Fchsd1Q6PFY1 688 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ythdf3Q8BYK6 585 aaKnown RBP12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Lrrc34Q9DAM1 415 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Jph2Q9ET78 696 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Rbm8a2A0A0N4SUH6 174 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Plekhd1B2RPU2 505 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Adora1Q60612 326 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ppm1mQ8BU27 406 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Fermt3Q8K1B8 665 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Rbm8aQ9CWZ3 174 aa12.83□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Zfyve27Q3TXX3 415 aa12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Rnpc3Q3UZ01 514 aaKnown RBP12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Rexo4Q6PAQ4 432 aaKnown RBP12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 AmphQ7TQF7 686 aa12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ppfia2Q8BSS9 1257 aa12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Gpcpd1Q8C0L9 675 aa12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 SmtnQ921U8 923 aa12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Rrp15Q9CYX7 281 aaKnown RBP12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Net1Q9Z206 595 aa12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Flt3Q00342 1000 aa12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Krt39Q6IFX4 482 aa12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Pank4Q80YV4 820 aa12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Mybbp1aQ7TPV4 1344 aaKnown RBP12.82□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Serpinb1cQ5SV42 375 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ccdc50Q810U5 305 aaKnown RBP12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 GlmnQ8BZM1 596 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Tldc1Q8K0P3 455 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Srgap2Q91Z67 1071 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Chmp3Q9CQ10 224 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 2310002L09RikQ9D7L5 217 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Rc3h1Q4VGL6 1130 aaKnown RBP12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Usp13Q5BKP2 858 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Ankle2Q6P1H6 964 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Cep104Q80V31 926 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Mei1Q9D4I2 1268 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Large1Q9Z1M7 756 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Myo3bQ1EG27 1305 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Npc1l1Q6T3U4 1333 aa12.81□□□□□ -0.36
Ssh1-201ENSMUST00000077689 Alpk3Q924C5 1678 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms