RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 L1td1Q587J6 782 aaKnown RBP11.15□□□□□ -0.62
Cpsf1-201ENSMUST00000071898 Arhgef6Q8K4I3 771 aa11.15□□□□□ -0.62
Cpsf1-201ENSMUST00000071898 Usp33Q8R5K2 909 aa11.15□□□□□ -0.62
Cpsf1-201ENSMUST00000071898 Tns2Q8CGB6 1400 aa11.15□□□□□ -0.62
Cpsf1-201ENSMUST00000071898 Zfp853A0A1D5RM95 733 aa11.15□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Rbm15bQ6PHZ5 887 aaKnown RBP11.15□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Kif1bpQ6ZPU9 617 aa11.15□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Kcnk13Q8R1P5 405 aa11.15□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 SarnpQ9D1J3 210 aaKnown RBP11.15□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Cul5Q9D5V5 780 aa11.15□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Sept14Q9DA97 430 aa11.15□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Rtkn2Q14B46 604 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Trim56Q80VI1 734 aaKnown RBP11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Tmem179Q8BHH9 233 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Ppfibp1Q8C8U0 969 aaKnown RBP11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Dnajc25A2ALW5 357 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Nfxl1E9Q8I7 918 aaKnown RBP11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Igbp1Q61249 340 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Ankrd13aQ80UP5 588 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Erlin2Q8BFZ9 340 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Nrbp1Q99J45 535 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Lonrf3Q9D4H7 753 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Uso1Q9Z1Z0 959 aaKnown RBP11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Lbhd1A0A087WPA0 259 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Tspyl3Q3UYP3 334 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Atxn2lQ7TQH0 1049 aaKnown RBP11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Frat2Q8K025 231 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Map3k15A2AQW0 1331 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Nup153E9Q3G8 1462 aaKnown RBP11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Carmil3Q3UFQ8 1375 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Prss51A0A286YDY8 319 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Fam186bD3Z420 943 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Chrna5Q2MKA5 467 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Vmn1r199Q8R280 367 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Uba5Q8VE47 403 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Paip2Q9D6V8 124 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Hip1rQ9JKY5 1068 aa11.14□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Lipo1J3QME6 396 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 U2af2P26369 475 aaKnown RBP11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Psmb7P70195 277 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Prpf38aQ4FK66 312 aaKnown RBP11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Sp4Q62445 782 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Nlrp9bQ66X22 1003 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Lrrc45Q8CIM1 670 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Add3Q9QYB5 706 aaKnown RBP11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Add2Q9QYB8 725 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Zbtb12Q9Z150 459 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Pcdhb9E9Q5G2 828 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 XpcP51612 930 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Ppp2r5bQ6PD28 497 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Q9D5Q8 446 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Bcl9lQ67FY2 1494 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Pus7B7ZNL8 666 aaKnown RBP11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Cyp3a57D3YYZ0 503 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Foxp1P58462 705 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Znf667Q2TL60 609 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Lrrc8aQ80WG5 810 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Zfp317Q8C0Q5 607 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Spon1Q8VCC9 807 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Themis2Q91YX0 663 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Nfe2l3Q9WTM4 660 aa11.13□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Zfp804bA0A0G2JGH6 1343 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Tbc1d2B1AVH7 922 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Lnx1O70263 728 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Mdh1bQ5F204 500 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Mb21d2Q8C525 428 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Calml3Q9D6P8 149 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Tubgcp6G5E8P0 1769 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Zfp142G5E869 1843 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Gm30191A0A0U1RNT7 187 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Brpf3B2KF05 1204 aaKnown RBP11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Gm10378F6XQQ1 160 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Nfil3O08750 462 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Ccdc174Q3U155 467 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Sptlc3Q8BG54 563 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Cep128Q8BI22 1102 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Zswim4Q8C7B8 1101 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Slc4a8Q8JZR6 1089 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Vmn2r68L7N2B3 851 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Diaph1O08808 1255 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Zbtb7aO88939 569 aaKnown RBP11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Igfbp6P47880 238 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Nod2Q8K3Z0 1020 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Nol7Q9D7Z3 254 aaKnown RBP11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Mroh6V9GX81 722 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Gna11P21278 359 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Nedd4P46935 887 aaKnown RBP11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Specc1lQ2KN98 1118 aaKnown RBP11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Znf496Q5SXI5 585 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Tbc1d31Q6NXY1 996 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 HlfQ8BW74 295 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Pold4Q9CWP8 107 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Dpf1Q9QX66 387 aa11.12□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Gm43638A0A0J9YU36 694 aa11.11□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 NfixP70257 488 aa11.11□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Cacna2d4Q5RJF7 1116 aa11.11□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Ubxn10Q8BG34 277 aa11.11□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Lrrd1Q8C0R9 853 aa11.11□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Erlin1Q91X78 346 aa11.11□□□□□ -0.63
Cpsf1-201ENSMUST00000071898 Cxcl11Q9JHH5 100 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms